Etheostoma cragini (Arkansas darter): 117955187
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Entry
117955187 CDS
T07493
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117955187
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117955187
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Ank
Motif
Other DBs
NCBI-GeneID:
117955187
NCBI-ProteinID:
XP_034745351
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All DBs
Position
13:10611997..10618946
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AA seq
958 aa
AA seq
DB search
MENLTPEQWREIMNRKMRFPPELIGAIQEGNTEMLFGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGNESCMDALLHGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYEIVNMLTQKGHVIPWPHKISCACLECC
NGRQYDLLKFSLSRINTYRGIASRAYLSITSDDAMLRAFGLSRELRKLSQKEPEFKPQYL
GLEEVCQEFAVELLGMCRNQSEVTTILNSCGNESQDSLEQQAFEEGIPNLSRLRLAVNYN
QKLFVAHPICQQVLSSIWCGSLSGWRGSRTAFKLFVSIGIFLTMPLLCLVYWIAPKSKVG
KIIKIPVIKFLLHSASYLWFLITLLGESIAMELYRDKFASREDNILHNSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFALRVLIMLKGYFLCYDHKGTEECVYF
TQTVRKDWHQEDPQLIAEVLFAVTSLLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNIYVPYVISPHLGRFNETFYFLFWTMFGMANQQYVDMPDFVVAEF
VGRVLYGIFTLIIVIVLLNMLVAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAVFYILRGVFRQICCCCTFNSENKYPPIDSMTNDKGGEDSQLPYRQQVTRA
LVQRYIESARREFEETKRRDIGNRITELTKTVCKMHNDMKVVQQLLMDDGQPAHGTWTKD
GSSFLGKYITGAKNNFIGFNSRDDQNESLKVTLHHKEGREDKENVQSDTKQDSDALQNQV
GECGAEGSQQVTDCDVMKMEEGRTKTEPGVKKEIEKEEQVEADTNENTDTEVKEEVVAGI
TFNHVKVNAEATQDGVPGVKKPVANKMIPSPTASSSSHDTGFGSQEGDGSIDGILVRP
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagaacaatggcgagagattatgaacaggaagatgcggttccct
ccggagctcattggtgccattcaggaggggaacacagagatgctgtttggactgttgaag
accggggatggcatcatccgtcagctggatgagtctgaggatcgtcagtggagggaggcc
ctcaacctgtccatccgcctgggcaatgagagttgcatggacgccctcctccacggggtc
aagtttgacttccgtcagattcacgaggccctgctcgtcgctgtggacaccaaccagccc
agagtggtgaagcgcctgctggaccgcctggaccaggagaaaggcaacaagatggacgtg
cgctctttctctcaggccatctttgaccactctattgacaactcccagtttgcccctggt
gtgacacctctgaccttagcctgccagaaagacctgtacgaaatagtcaacatgctcacc
cagaaaggtcacgtcatcccgtggccgcataagatatcctgtgcctgtctggagtgttgt
aacggccgtcagtatgacctgctcaagttctccttgtcccgtatcaacacctaccgtggc
atcgccagccgcgcctacttgtccatcacctccgatgatgccatgctcagggctttcggt
ctcagcagagagctccgcaagctctcacaaaaagagccagagtttaagcctcagtacctg
ggcctggaggaggtttgtcaggagtttgccgttgagttgctgggcatgtgtcgtaaccag
agcgaggtgaccaccatcctgaacagctgtggaaacgagagccaggactccttagagcag
caggcctttgaggagggaatccccaacctgtcacgtctgcggcttgctgtcaactacaac
cagaagctgtttgtggcccacccaatctgccagcaggtgctgtcttctatctggtgtggg
agcctgtccggctggagaggcagcaggacggcctttaagctgtttgtctcaatagggatc
tttctcaccatgcctctcctctgcctcgtctactggatcgcacccaagtcaaaggtagga
aagataatcaagattcctgtgatcaagtttctcctccactcagcctcctatctgtggttt
ctcatcacgttgctcggagaatcaatagcaatggagttgtatcgagacaaatttgcttcc
cgggaggacaacatcctgcacaactccttccacatggtgtgggtggtcggattcttctgg
tacgagtgtaaggaagtgtggattgaggggctgcggagttacttcctggactggtggaac
tgcttggacgtgatggtgctcagcatgtacctggcatcatttgcattacgcgtgctcatc
atgctcaaaggttacttcctctgctatgatcataaaggcacagaggagtgtgtctacttc
actcagactgtgcgcaaggactggcatcaggaggacccccagctgattgcggaggtgctg
tttgcagtgaccagtttgttgagcttcacacggctggcgtacatactgccagcacatgag
tctctgggaactctgcagatctccataggaaagatgattgatgatatgatgcgatttatg
tttatattgatgatcattggaaccgccttcctctgtggcatcaacaatatatatgtacct
tatgtcatctctccacatcttggcaggtttaatgagacgttctacttcttattctggacc
atgtttggcatggccaaccagcagtacgtggacatgccagactttgtggtggcagagttt
gtagggagggttctgtacggcatcttcacgctcatcatcgtcatcgtcctgctcaacatg
ctagttgccatgatcaccaactcctttcagaaaattgaggatgatgcagatgttgagtgg
aaatttgccaggtcgaagctgtacctcagttacttcagagagggcctcaccatgcctgtg
cccttcaacatcatcccctcacccaaagctgtcttttacatcttaaggggtgtctttaga
caaatctgctgctgctgcacttttaattctgagaacaaatatcccccgatagactctatg
accaatgataagggaggtgaagacagccagttaccttaccggcagcaggtgaccagagcg
ctggtgcagcgctacattgagtcagctcgcagggagttcgaggaaaccaagaggagagat
atcggtaatcggataactgagctgaccaaaacagtctgcaagatgcacaatgatatgaaa
gtggtccagcagcttctgatggatgatggacagcctgcacatggcacatggacaaaggat
ggatcctcctttctgggaaaatatatcactggtgcaaagaacaatttcataggttttaac
agcagagatgaccaaaatgaatcacttaaagtgacattacaccataaagagggaagggaa
gataaagaaaatgtccaatcagacacaaaacaagactcagatgcactgcagaatcaggtg
ggcgaatgtggagcagagggatcccagcaggtaacagactgtgatgttatgaaaatggag
gagggcagaactaaaacagaaccaggagttaagaaggaaattgagaaagaagagcaggtg
gaagcagacactaatgaaaatactgatactgaagtgaaagaggaggtggtggcagggatt
acttttaatcatgttaaagtaaacgctgaggctacacaggatggggtgccgggtgtcaaa
aaacctgtagctaacaaaatgattccctcgccaacagccagcagcagctctcacgacaca
ggctttggttcccaagaaggggatggatcgattgacgggatactagtaagaccgtaa
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