Etheostoma cragini (Arkansas darter): 117955205
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Entry
117955205 CDS
T07493
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117955205
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117955205
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117955205
NCBI-ProteinID:
XP_034745414
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All DBs
Position
13:7986285..8016500
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AA seq
872 aa
AA seq
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MKGGGRGKEPPVAGEVTGKRPKRKCLQWHPLLSKKALDFSEEEEEEDEEELEKQPELCGQ
DQGSQHVQCGSTTEEVEEDSNEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILA
DWWAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTSKPVKSPSGQPVSSSPRKKVWS
FSSNSTKDSPTAKKMPKTESMPQLNFAMADPTKMGGLSMLLLAGEHALTNREIPSTKSSL
PDTASEGNSFPGDEEEMLSGTTPNRVPDIIESRVKAAPSAQAESSLSAAPEGKPCGQSAL
FQLAEMCLASEAGKMDSVECEPKDCCSTASLQKTTGRPGGKVQTADREDCPSSPHTSGLV
PSLSSVTSTSTDVIQPQLSSQNARVKNKSKKKEGAKSNDNDEIPCSAKKIIKKCNHAESN
VDSVFSTIEAVAKGAWKDIEEKPKKKIQSSPSAGNSGGPKKKSKLKVKTPVKEREEEMVE
DSVQCGQYSSSEVEMKEEMAEASPKDEAEEASIGSSELQGSAAEAHQSPGSPSPTKLKVE
EKGKERSSDGTCDSNPENHGSRKSERSCKGALYKTLVSEGMLTSLRANIDRGKRGVFRGS
DHDANWSDDSWTVSQIGPNNPKKLKKSKSKDECSQGLGKLEEEFERKFNSLPQYSPMTFD
KKGIAVAKKKKTDSPNIPEEVSKAGKGPSPSQKKTSFHKIVRKHKHKKEKPSAVDKVLQS
DSNMLDLASKAKSCAPVAIMCPDVQGPTSMEMLVGSQKRKARKTKITHLVRTADGSVSPA
EEDKTRDLNQEEDKKPLPQQNLCNDKGCYSNPRGAEEAERSTGPPELPAFFSLAALAEVA
AMENVHRGQRGLVENQKKELGQTPVLISCADQ
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggaggcagaggtaaggagccacctgttgcaggggaggtcactggcaagcgc
cccaaacgcaagtgcctgcagtggcacccactcctgtccaagaaggctctggatttctct
gaggaggaggaagaggaggatgaagaggagctggagaagcagccagagctgtgtggccag
gaccagggctcgcagcatgtgcagtgtggaagcacaacagaggaagtggaggaggactca
aatgagcagcgtgcacggcggccaatgaatgcctttctcctcttctgcaagcgccaccgt
tccttggtgcggcaggaacatcctcgcctggataaccgcggggccaccaagatactggct
gactggtgggctgtgctggagcccaaagagaagcagaagtacacggacatggccaaggag
tacaaggatgcctttatgaaggccaacccgggttacaagtggtgtcccaccaccagcaag
ccggtgaagagcccttccggtcagcctgtcagcagcagcccccgcaagaaagtttggtcc
ttctcttccaactccaccaaggactcccccactgccaaaaaaatgcccaaaactgaaagc
atgccacagttaaactttgccatggcagaccctacaaagatgggaggccttagcatgctg
ctgttagctggggaacatgccctcacaaacagagagatccccagcactaaatctagttta
cctgacacagccagcgaagggaactcatttccaggggatgaggaagagatgttgtctggg
acaacaccgaaccgagtgcctgacattattgagagcagggttaaggctgccccttccgca
caggcagagtcatctctctctgcggcacctgaaggaaagccatgcgggcagtccgctctc
tttcagctggctgagatgtgcttagcgtctgaagctggaaaaatggactcagtggaatgt
gagcccaaggactgctgctctacagcctctctccagaaaaccaccggcaggccaggaggc
aaggtgcagacagccgacagggaagactgtccttcctccccccacacatcgggccttgta
ccttcactctcctctgtcacgtctacctccactgatgtcatccagccacaacttagcagc
caaaacgcacgtgtcaaaaacaagagcaagaaaaaagagggggccaagtcgaatgataat
gacgagatcccttgctcagcgaagaagatcatcaagaagtgcaaccatgcagagtcaaac
gtggacagtgtcttcagtacaattgaggcagtagccaaaggagcctggaaggacatagag
gaaaagcccaagaaaaagattcagagcagtccaagtgctgggaactctggtgggcccaaa
aaaaagagtaagctcaaagtcaagacccctgtcaaagaaagagaggaggagatggtggag
gacagcgtgcagtgtgggcagtacagttcctctgaggtggaaatgaaggaagagatggct
gaggccagtcccaaggatgaggcagaagaagccagtataggaagctcagagcttcagggc
agcgctgcagaagcccaccagtcccccggcagcccctcgcctaccaagctcaaagtagaa
gaaaaggggaaggagcggtcgagtgacgggacctgtgactcaaacccagagaaccacggc
tccaggaagtcagagcggagctgtaaaggcgccttgtataaaaccctggtttctgaagga
atgctgacttcactgagggcaaacattgaccgagggaaaagaggtgttttccgtggttca
gaccatgatgcaaactggagtgatgacagctggacagtttctcagataggacctaacaac
cccaagaagttgaaaaagtccaagtccaaagatgaatgttcacagggcctcgggaaactg
gaggaggagtttgaaaggaagtttaacagtctaccacagtatagcccaatgacatttgat
aagaaggggattgctgtcgcaaagaagaaaaagactgacagccccaatatcccagaggaa
gtatctaaagcggggaaagggccatctccatctcagaaaaagacttcattccacaagatt
gttaggaagcacaaacacaaaaaggagaaaccaagtgcagtggacaaagtgttacagagt
gattccaacatgctggatttagcttcaaaagccaaatcatgtgcccctgttgccataatg
tgcccagatgtccagggccccactagcatggagatgctagttggtagccagaagaggaag
gctaggaagaccaagatcacacacttggtgcgcacagctgatggcagcgtatctccagcc
gaggaggacaaaactagggacctgaaccaggaagaggataagaagccattaccccaacag
aatttatgcaatgataaagggtgctacagtaatcccagaggagcggaggaggcagagagg
agcaccggacccccggagctgcctgcgttcttcagcctggcagccctcgctgaggtcgca
gccatggaaaacgttcacagaggccagagaggcttggttgagaatcagaagaaagagctt
ggccagaccccagtcctcatctcctgtgctgaccagtga
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