Etheostoma cragini (Arkansas darter): 117955231
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Entry
117955231 CDS
T07493
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03030
DNA replication
ecra03410
Base excision repair
ecra03420
Nucleotide excision repair
ecra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117955231 (rfc3)
03410 Base excision repair
117955231 (rfc3)
03420 Nucleotide excision repair
117955231 (rfc3)
03430 Mismatch repair
117955231 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecra03032
]
117955231 (rfc3)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117955231 (rfc3)
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117955231 (rfc3)
DNA replication proteins [BR:
ecra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117955231 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
117955231 (rfc3)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117955231 (rfc3)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117955231 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
117955231 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
DUF2247
AAA_11
AAA_5
MyTH4
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117955231
NCBI-ProteinID:
XP_034745451
LinkDB
All DBs
Position
13:14922351..14925454
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLAKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTLAQSQQ
IQSSSQREFKVVLLTEVDRLTKDAQHALRRTMEKYMYTCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSTEEVCNVLTSICKKEGLLLPPELAKQISDKSGRNLRKALLMCEACRVQQYPF
SAVQDVPTTDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDVIMKGLVTELL
SNCDGQLKTEVAQMAAYYEHRLQLGSKAIYHLEAFTAKFMAIYKKFMEDGLDDMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtagataaatatcgaccgacttccctcgcgaaactagactatcataaa
gagcaagcgactcagctgaaaaacctggttcaatgtggtgacttccctcacctgttggtg
tacgggccgtcaggcgcggggaagaagacccgcatcatgtgtctgctgagggagctgtat
ggagctggggtggagaagctccgcatagagcaccagaccatcgtggctccttcaaagaag
aaaattgagattaacacaatagccagcaactaccacttggaagtcaacccaagtgatgct
ggcaaccaggaccgtgtagtgattcaggagctaattaaaactttggctcagtcccaacag
atccagtcaagctcccagagagagtttaaagtggtgttgctaaccgaggtggacagactc
acaaaggatgcccagcatgctttacgccggacaatggaaaagtacatgtacacctgtcgt
ctcatcctctgctctacctccacctccaaagtcattgggccaattcggagccgttgtctg
gctatcagagttcctctgccgagcacagaagaggtctgtaatgtcctgacatcaatctgt
aaaaaggaaggtctgctcctcccacctgagcttgccaagcaaatctctgacaagtctggt
cgcaacctccgcaaagcccttttgatgtgtgaggcctgcagagtgcagcagtatccattc
tcagctgtccaagacgtcccaacgacggactgggaggtctacctcagagaaaccgctaat
gccatcgtcagccagcagagccctcagaggttgttagaggttcgagccaggctgtacgag
ttgctgactcactgcatccctcctgatgtcattatgaagggtctggtaacagagttgttg
agtaactgcgatggtcagctgaagacagaggtggctcaaatggcagcctactacgaacac
agattgcagctgggcagcaaagctatctaccaccttgaggccttcaccgccaagttcatg
gccatctacaagaaattcatggaagacggtctggatgacatgatgttttga
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integrated database retrieval system
