Etheostoma cragini (Arkansas darter): 117955252
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Entry
117955252 CDS
T07493
Symbol
synpo2b
Name
(RefSeq) synaptopodin-2 isoform X1
Organism
ecra
Etheostoma cragini (Arkansas darter)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
117955252
NCBI-ProteinID:
XP_034745478
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Position
2:complement(13917341..13929482)
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AA seq
1087 aa
AA seq
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MEPEAEDPDNNDNLVPWSGSDGSRELCESYNEDDAIDAEYPLDPLPAHIPMSESPESLQS
QDWESAGEQYSLPELSGSEENVSYQEEDDDLSELRESITESPHFEPSPTSQSQHRQHPES
EPHAGQISRLHSRSSSSSLGCAADMTLALTLTTEKPLGASNRQGPGTRNRRVESSEEGGS
CEAPPASIFFGISDEVAEQAEKWNSEANTDLCRPDRHRARSTQLNHNESQSERNVKETKS
KCKQIARLLTDAPNPRNKGALLFEKRRQRVKKYTLVSYGTGENKLDSKGQIEEETEVRSA
GYNFVATSESDLEEEYCVHHQQRNFNLNWERVGEMEALPETKGKGVMMFAQRRKRMDDIV
SEHEELRNKGLPVETLTEPERTEVQNMYDTEEMYVFTDQANYMDANLQQHVEQQPSLQQM
HHLSNVPKPLVPNRTAKPFLGFHVSTTVPALPGGVPSMTKKHEPRFRVPVPINTHPQVWS
PTGDIIASRDERISVPAIKTGILPESKRKATNKQLSMLAQGSHLHLQNKGERRSYIETEE
DCFSLGAEACNFMQPRTIKLKNPPPVAPKPTINPSCPPWMGRRPSGEPCIPPRSPVSQPS
QSPVMTDSQHYLQQQDWAQPQQMGNHWAPNQTQATLQTPANAWVPVNSSQLHLQPTTNSW
SQQLSQSPVSMQARSPTHSPHHTPSPSRNKLDSAPNSVASYPPQAEKTNTYATKASQASP
DGRVSGRGIVRAHDGPTMAGKGAELFAKRQSRMEKFVVDAETVQANKTRSPSPTLSLPNS
YRYSSIVRAPPPLSYNPLLAPFYPPSAAKQTPSTSPKIKPKTKAKPKAAPKHLNPLDIMK
HQPYQLDASLFKYNAVPEGKSPSPKPTPASKFEVIKNLKHRSDPSHSPTNASELVVQSKA
DVPSKSPVSGFGRSHSLSLPKRLNSVPSPRVVSPASTLGIQSSFLPAQRQTSFQEKAYKP
LSPWDAASRSPIGSVDDAFVFQSLPSSVASNVKATAHRRSLPEPPDEWKRRVSLDPAAVS
MAHYHAAPAFQAPFMSRTFSPEKPAFYGPPFRPAQPLGPDSRASIGYMVHVSSPTKYSPL
HSAVQRS
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagaagctgaagacccagacaacaatgataacttggtcccttggtcaggttca
gatggttcgcgggaactttgtgagtcttacaatgaagatgatgccattgatgcagagtac
cctttagaccctctacctgctcacatcccaatgtcagagtccccagaaagccttcagtca
caagactgggagtctgcaggtgagcaatattccttgcctgaactcagcggaagtgaagaa
aatgtttcataccaagaagaggatgatgaccttagtgaattaagagagtccattacagag
tctcctcacttcgaaccctcaccaacatcacagtcacaacaccgacagcaccctgagtca
gagcctcacgccggccagatatcaaggctgcattcccggtcatcttcctcctctcttggt
tgtgcagctgatatgaccctggccttgaccctgaccacagagaagcctctgggagccagt
aataggcagggcccagggactaggaacaggagggttgaatcatcagaggaaggagggagt
tgtgaagcacctcctgcttctatcttctttggaatttcagacgaagttgctgagcaggca
gagaagtggaactcggaggctaacacagatctgtgcagaccggacagacacagggcaagg
tccacacagctcaatcacaacgagagccaatcagaaagaaacgtcaaggagactaagtcc
aaatgtaagcaaattgctcggcttctaacagatgcacccaaccctcgaaataagggagcc
ttgctgtttgaaaaacgccgccagagggtcaagaagtatacacttgtgagttacgggact
ggtgagaacaagcttgacagcaaaggccaaatagaggaggaaactgaagtccgatcagct
ggttataactttgttgcaacaagtgaatctgacttagaagaggagtattgtgttcatcac
cagcagcgaaatttcaatctgaattgggaaagagttggagaaatggaagcactaccagaa
acaaaaggaaagggtgtcatgatgtttgctcaacgccgcaaacggatggatgacattgtg
tcagagcatgaagaactgaggaataaaggattacctgtggagacattaacagagcctgaa
cgtacagaagttcagaatatgtatgacactgaggaaatgtacgtgtttactgatcaggcc
aactacatggatgcaaatctccagcagcatgtagaacaacaaccgagtcttcaacagatg
caccacctgtccaatgtgccaaaacccttggtgccaaacagaactgcgaagcctttcctt
ggatttcacgtcagcacaactgttcctgccttgcccggtggcgttccttcaatgacaaag
aagcacgaaccgagatttagagtacctgttcctattaacactcacccgcaagtttggtcc
ccaactggagacattatagcctcaagagatgagcgaatatctgtaccagcgataaagacg
ggcatcctaccagagtctaaaaggaaagccactaataaacagctatccatgcttgcacaa
ggatcacatcttcaccttcaaaacaaaggtgaaaggaggtcttatattgagacagaggaa
gactgttttagtctaggtgctgaagcttgtaactttatgcaacccagaacaataaaactc
aagaatccccctccagttgccccaaaacctacaattaacccatcctgcccaccttggatg
ggaaggcgcccctctggcgagccctgtattccaccaagaagtccggtttcacaaccttct
caaagtcctgtcatgactgatagtcagcattacttacagcagcaagattgggcgcagcct
caacagatgggaaaccactgggcaccaaatcaaactcaggcaacacttcaaacacctgcc
aatgcctgggttcctgtcaactcttctcagcttcatcttcagccaaccacaaatagctgg
agtcaacagctgtcacaatcccctgtgagtatgcaggcccgcagtcctactcacagccca
catcacacaccttcaccctcaaggaataagttggacagtgctccaaactcggttgcctct
taccctccacaagcagagaagacaaacacctatgcaacaaaagcatcacaggcttctcca
gacggtcgagtctcaggcagaggtattgttcgggcgcatgatggtccaaccatggcagga
aaaggtgcagaattatttgccaaaagacagtcccgtatggagaagtttgttgttgatgct
gaaacggtgcaagctaacaaaacaagatccccctcccccacattgtcactccccaactcc
tataggtattcttccattgttcgtgccccgcctcctttatcatataatcctcttcttgct
cctttctaccctccatcagcagccaagcaaaccccttccacaagccccaaaatcaagcct
aagaccaaagccaaacctaaagcagccccaaagcacctcaaccccttagatattatgaaa
catcagccgtatcagttggacgcgtcactgttcaagtataatgcagtccctgagggcaaa
agccccagccccaaaccaactccagcatcgaagtttgaagttatcaaaaaccttaaacat
agatcagacccttctcattctcctactaatgcctctgagcttgttgttcagagcaaggca
gatgtcccctctaagtctcctgtatcgggatttggtagaagccactccctgagtctgccc
aagcgactgaattcggtgccttctcccagagttgtgtcaccagcgagcacacttggaatc
cagtcttcatttttacccgcacagagacaaacatcatttcaagaaaaggcctacaagcca
ctgtcaccgtgggatgcagcatccagaagccccattggttcagtggatgatgcctttgtg
tttcagagcctcccttcatctgttgcctctaatgtcaaagccacagcgcaccgcagatct
ctgccagagcctccagatgaatggaagcgcagggtgtctcttgatcctgcagctgtcagt
atggctcattatcatgcggccccagcttttcaggcaccgttcatgagcaggacattttca
cctgagaaaccagccttctatgggcctcccttcagacctgcccagcctctggggcctgac
agcagggccagtattggatacatggtgcatgtctccagtccaacaaagtactctcccttg
catagtgcagtccagagaagttaa
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