Etheostoma cragini (Arkansas darter): 117955258
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Entry
117955258 CDS
T07493
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117955258
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
ROBO family
117955258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
117955258
NCBI-ProteinID:
XP_034745509
LinkDB
All DBs
Position
13:3998180..4083360
Genome browser
AA seq
1604 aa
AA seq
DB search
MLAVQSPITFLLISLLGVNQLQPAHASDTDEHRGNREVITQTPASEPASEQDNSLGYKGS
RLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSHR
MLLPSGSLFFLRIIHGRRSKPDDGSYVCVARNYLGQAISHNASLEVAILRDDFRQNPVDV
MVAVGEPAVLECQPPRGHPEPTISWRRDGTNLDDRDERITIRSGKLMITNTRKSDAGKYI
CVGTNMVGERESEIAELTVLERPTFVKRPSSVVVLAEESVEFHCVVQGDPVPTVRWRKDD
SDLPKGRFEILEDHTLIVRQVTSLDEGSYTCVVENMVGKSESSATLTVHVNTVPPAFAIR
PRNQVVAVGRTVTFQCEATGNPQPAIFWQREGSESLLFSYQPPQPFSRLSVSQMGSLTIT
DVQRSDGGFYSCQALNIAGSVITKALLEVTDSGSDHPPPVIRQGPLNQTIPVDSTVVLGC
QTADVPSPTVHWKKDSVLVSPMDSRMSITDTGSLEIRYAKLGDTGFYTCVASSPNGEASW
TAYLQVEEFGVVVQSSQPIDPSLIPSAPSKPEVTDISHTSVTLSWKTNPNAGATPTSYLI
EAFSYTLGSRWVTLAEHIKTQTFVLRNLRPATVYLFLVRAVNAYGLSDPSPISDSVRTQD
STSTMQGVDHRHIQRELGDVVIHLHPPTVLSSSAVRMQWMVEQQSTYIQGYKVLYRASAD
HGQPEGQWSVLEVHAPKEDGVVIGQLKRGSIYEFKVRPFFDEFQGADSEVKVVRTLEEAP
TRAPQGVTVTKSDTNGTAILVAWRPPPQHEEAGVIQEYKIWCLGNESRYHVNQSVDGSIF
SVLIANLAPGIRYSVEVAASNGAGPGVRSDVTFFQLDSAGQMMDISEERDTLSQISDVVR
QPAFIAGIGATCWLVLMIFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFTPTVAYQRGESV
CSAARPGLLSMGEPLNQLWLPDNWPNACANHKDCSINCCNNGNGTSDSNMTTYSRPADCI
ANYGNHTENKQGGQLGSETAIYSDVNLSNKLNEIKTFNNSNLCYASPGGDSAATYEPIPY
ATTQLIQAGIKNKAGTGVSMAEALDVPCWKQPPNLPPIPKEMAAQMQYNIIEQNMLNKDH
LQGSEGVIHPKTIPYNQTRAHSSGGSHHSSDRGSNSTSGSQNQKKGTRAPKIPKHNAVSW
GEAPSPPHANAWDCDEYSLPMERSFDPEERMEGCPTPPLRGTVSSPPEVSYSHPPNATPQ
GDLSNGLHNGTEHLSQHIGGHPRPFSPTHTYSSIPFCMDTDVQEEDEEEEEEEAEEETDV
ELAESNYSQHQERQKHKHQLHHPSPHNLLLHGLEQTPASSSGDLDRSVTGSMVNSWGSAS
EDNISSGRSSVVSTSEGSFFTDGDFNQAVASSRDIVGLRMCRYPEESGRRHQRPSSPMST
DSNMSPAITHKRPRRHKQNQFGQQGYQPKDIFNDDSCMPLNFPSQMSHSDYKVRGATLPR
MGSGEARGRRGSAGTHRVREASLEQRESKDKHKTPLGGKGSSKSRQHSEFGDVLLYSRPS
FPSGQAQREPDDTNSSSFMSCGDLRTKQGGQLAPTGQVEEFLKS
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgtacaatcacccatcacattccttctcatcagcctgctcggtgtaaaccag
ctgcagccggcccacgcatcagatacggatgaacacagagggaaccgtgaggtcatcacc
caaacacctgcatctgagccagcgtctgaacaagacaacagccttggatacaaagggtct
cgtctccgccaggaagacttccctccccgcattgtggagcacccctctgacctcattgtg
tccaaaggggaaccagccactctcaactgtaaggcggagggccgtccaacccccacggtg
gaatggtacaaagatggggagcgcgttgagacggaccgcgacaacccccgctcccaccgc
atgctgctgcccagcgggtccctcttcttcctacgtatcatccacggacgacggagcaag
cccgacgacggcagctacgtgtgcgttgcccgaaactatctgggccaggcgatcagtcac
aatgcatcactggaagtagccattttacgcgatgacttcagacagaacccagtggatgtt
atggttgcagttggggagccggctgtgctggagtgccaaccacctcgtgggcaccctgaa
cccaccatctcctggaggagagatggtaccaacttagatgacagagatgaacgcatcaca
attcgcagcggcaagctgatgatcaccaacaccaggaagagtgatgcagggaaatacatc
tgcgttgggaccaacatggtgggagagagggagagcgagatcgccgaactcactgtgctt
gagcggccaacctttgtgaagcggcccagcagtgtggtggtgttggccgaggagagcgtg
gagttccactgtgtggttcaaggagaccctgttcccactgtccgctggagaaaagatgat
tctgacctgcctaagggacgatttgaaatcctagaagaccataccttgattgttcgccaa
gtgacctctttagatgagggctcctatacgtgtgtggtggagaacatggttggaaagtct
gaatcatctgccacgctcactgtacatgtcaatactgtacccccagcatttgccatacgc
cccaggaaccaggtggtggcagtgggcaggacggtcaccttccagtgcgaggccactggc
aacccacagcccgctatcttctggcagagggagggcagtgagagtttgctgttctcgtac
cagccaccacagccctttagccgtctgtctgtctcccagatgggcagtttgaccattacc
gacgttcagcggtctgatggcggcttttacagttgccaggctctcaacattgctggcagt
gttattaccaaagcactgctggaggtcacagactctggatcagaccatcctccccctgtg
attagacagggcccacttaatcagaccattcctgtggacagcacagtggtcctgggttgc
caaacagctgatgttccatctcctacggtccactggaagaaggacagtgtcctggtttct
cccatggactcccgcatgtccataacagacacaggatcactagagattcgctacgctaag
ctgggagatacaggcttctacacttgtgtagcttctagtcccaatggagaagcttcctgg
acagcatacttacaggtggaggagtttggagttgttgttcagtccagtcagccgatagac
cctagcctgattcccagtgctccgtctaaacccgaggtgactgacatcagccatacctct
gtcactctgtcgtggaaaacaaaccccaatgctggtgcaacacctacatcttatctgatc
gaggcattcagttatacgttaggaagcagatgggtgaccctagctgagcatataaagaca
cagacctttgtactgaggaacctgaggccagcaactgtctacctctttttggtcagagcg
gtgaatgcttatggcctaagtgaccccagtccaatctctgactctgtcagaacacaggac
agcacttccaccatgcagggagtggatcaccgacacatccagagggagctgggagatgta
gttatccacctgcacccaccaactgttctttcatcttctgctgtcaggatgcagtggatg
gtcgagcagcagtccacctacatccagggttacaaggtgctttacagggcatccgctgat
catggccagccagaggggcagtggagtgtcctggaagtacacgccccaaaggaggacggg
gtggtaatcggtcagctgaagcgaggctccatctacgagttcaaagtgcgccctttcttt
gatgagttccagggagctgacagtgaggtgaaggtggtcaggacgttggaagaagcccct
accagagcacctcagggtgtgacagtgacaaagagtgataccaatgggaccgccatcctc
gttgcttggagaccgcctccgcaacatgaagaagctggagtcattcaggagtacaagatc
tggtgcctgggtaatgagagtcgctatcatgtcaaccagtcggtcgacggctccatcttc
tctgtgctcatcgccaatctggcaccgggaattcgctacagcgtagaagttgctgccagc
aatggtgctggacctggtgtcaggagtgatgtcacttttttccaattagactctgcaggc
cagatgatggatatcagtgaggaaagagacacgttgtctcagatctcagatgtggtgagg
caaccggcatttattgctggcattggcgccacctgctggttggtcctcatgatcttcagt
gtgtggctctaccgtcaccgcaagaagagaagtggcctcagcagcacatacaccggcatc
cgcaaggtcccctcattcacctttacacctacagtggcgtatcagagaggagaatctgtg
tgcagtgctgccagacctggccttctcagcatgggtgaacctctaaaccagctgtggctg
ccagacaattggccaaatgcatgtgccaatcacaaggactgcagcatcaactgctgcaat
aatggcaatggcaccagtgacagcaacatgacaacatacagccgaccagctgactgcata
gctaactatggaaaccatacagaaaacaaacaggggggacagcttggttctgagacggcc
atttacagcgatgtgaacctctccaacaagctcaatgagattaaaacattcaacaactcc
aacttgtgctacgcgagtccaggaggggattcagcagccacatatgaacccatcccatat
gccaccacacagctcattcaagccggcattaaaaataaggcaggcactggtgtctctatg
gcagaggctctggacgtgccctgctggaaacagccccccaacctgcctccaataccaaag
gagatggcagcacagatgcaatacaacataattgagcaaaacatgctaaataaagatcat
ctacaaggaagtgaaggagtgatccatcctaaaactatcccctacaaccagacccgtgcc
cacagctcaggaggctcacaccacagctcagacagaggcagcaacagcacctcagggagt
caaaatcaaaagaaaggaacacgggccccaaagatcccaaaacataatgcagtaagctgg
ggagaagccccatctcctcctcacgctaatgcgtgggactgtgatgagtatagcttaccc
atggaaaggagttttgatccagaagagagaatggaaggctgccctactccaccacttaga
gggactgtctcatcccctcctgaagtgtcttatagtcacccacctaacgcaacaccacag
ggagacctgagcaatggcctgcacaatggaaccgagcacctcagccaacacatcggcggc
caccctcgccctttttcaccaacacacacctacagctccatacccttctgcatggacacc
gatgtacaagaggaggatgaggaggaagaggaggaggaggcagaagaggagacagacgta
gagctcgccgaaagtaactacagccaacaccaagaacggcagaagcacaaacaccagctg
caccatccctctccacacaatctgcttcttcatgggctggagcagaccccagcctccagc
tctggggatctggacagatcagtcacggggtccatggtcaacagctggggctcagcatct
gaggacaacatctcatctggccggtccagtgttgtcagcacctcggaaggatccttcttt
acagacggcgatttcaaccaggcggtggcctcttcgcgggatattgtgggcctgcgcatg
tgtagatacccagaggagtcagggcggaggcaccagcggcccagcagccccatgtccaca
gacagcaacatgagtcctgcaataacacataaaagacccagacggcataaacagaaccag
ttcggtcaacagggctaccaacccaaagatatcttcaatgacgactcgtgcatgcctttg
aattttccaagccagatgtcccacagcgactataaagtgaggggggccacgctgcctcgg
atgggctctggggaggcccggggtcgacggggtagcgccgggactcacagggtcagggag
gcttcacttgagcagagagagagcaaggacaagcacaagactccactaggagggaaagga
agcagcaaaagccgacagcactcagaatttggggatgtccttctgtacagtcgtccctct
ttcccatcaggtcaagctcagagggaacctgatgatactaattcatccagctttatgtca
tgtggagacttaaggaccaaacagggaggacagctggcacctacaggacaggtggaagag
ttcctgaaaagctaa
DBGET
integrated database retrieval system
