Etheostoma cragini (Arkansas darter): 117955275
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Entry
117955275 CDS
T07493
Symbol
msi2b
Name
(RefSeq) RNA-binding protein Musashi homolog 2b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117955275 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117955275 (msi2b)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117955275 (msi2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_PARP14_1
CSD
Motif
Other DBs
NCBI-GeneID:
117955275
NCBI-ProteinID:
XP_034745552
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Position
13:complement(3370558..3607256)
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AA seq
408 aa
AA seq
DB search
MEGDGSQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVAAAAVAAARGSGRGARGRGGYLAYPQSTGPGLPDYGFYSTPSDQRGGP
CSFADYGSLGPQAAQMLHSEHATSACNSPLQHLHSPDQFKNPGGNPSRPGGFPGANSPGP
VADLYGPSSQDSAVGNYISAASPQPGSGFGPSITQSITGGPGKTGRSF
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagtcaagccacatccggaagcctaaatgattcacaacatgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacctcaccagacagccttagagactat
tttagtaaattcggggaaataagagaatgtatggtgatgagagatcccacgacaaaacgc
tcaagaggatttgggtttgttacgtttacagatgctgccagtgtagataaagtcttagcc
caacaacaccacgaattagactcaaagacgattgatcctaaggttgcctttccacgtcgc
gcccagcctaagatggtcacaagaacaaagaaaatatttgtgggtggcttgtcagccaat
acagtagtggaagatgtgaagcagtattttgaacagtttgggaaggttgacgatgccatg
ctaatgtttgataagactactaacagacatagaggatttggcttcataacttttgagagt
gaagacatcgtagagaaagtctgtgaaattcattttcatgaaatcaataacaaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttcccaccaggtacacgagggcgagcc
aggggtctgccctacaccatggatgccttcatgctggggatgggcatgctgagctaccct
aatattgtggcgacgtatggccgcggatacactggattcgcaccaagctacagctaccag
ttccctggcttcccagcgacggcatacggaccggtggcggcagcggcggtagcagcagcg
cgtggctcaggtaggggggcccgtggaagaggcggctacttggcgtacccacagagcaca
gggccaggcctccccgattatgggttttactctacgcccagtgaccagaggggggggccc
tgctcctttgctgactatggctccctggggccccaagcggctcagatgctgcacagtgag
catgccacctccgcctgcaactcccccctccagcacctacacagcccggatcaatttaag
aacccaggcggcaacccatcaaggcccggaggtttccctggtgctaacagtccagggcct
gttgctgacctgtacggacctagcagccaggattcagctgtgggcaactacatcagtgct
gctagccctcagcctggctctgggtttggccccagcatcacacagagtataactggtggc
ccaggaaagacaggacgaagtttctaa
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