Etheostoma cragini (Arkansas darter): 117955292
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Entry
117955292 CDS
T07493
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117955292 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117955292 (cnga1a)
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117955292 (cnga1a)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
NPR3
Piezo_TM1-24
Sec62
Motif
Other DBs
NCBI-GeneID:
117955292
NCBI-ProteinID:
XP_034745587
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All DBs
Position
2:14171543..14177002
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AA seq
710 aa
AA seq
DB search
MDSSTTLPPHTVPLHTVPQLSTDSDESSEDDRSAPESNHHCLLNVNNSNNNEEKKKKKRK
KEKEKKENKKKEKKEKEAKEAKEKEDKEKEKEKEKEEKEKEKEKEKEKEKEKEKENVKDK
DKPEEIFVINPAGNLYYNWLFIITLPVMYNWTMIIARACFEELQHDYIMYWVILDYTSDL
IYLADMFFRTRTGYLEQGLMIKDKKLLVDRYIATFQFRLDFISMLPTDFLYFFLGLDYPE
IRINRLLRIGRMMEFFTRTETKTNYPNIFRIGNLIMYILIIIHWNACFYFSFSKYIGFGA
DDWVYPALDDPDEPAFGEFGRKYSFSLYWSTLTLTTIGETPPPALDSEFFFHVIDFLVGV
LIFATIVGNIATMISNMNAAQAQFQSRIDNIKQYMQVRKVSKDLELRVIKWFEYLWNSGR
AQDEREVMRYLPDKLKAEIGIQVHMETLKKVRIFADCEAGLLIELVLKLQAQVFSPGDYI
CKKGDIGREMYIIKDGKLAVVADDGVTQFVVLGSGSYFGEISILNIKGSKAGNRRTANIR
SIGYSDLFCLSKDDLMESLLEYPDAKGMLEEKGREILMKDGLIDLDPANIIPEAKELEEK
VNKLYSTLELMQFKLKKVLGNYKNTDKALRHRIADLEHLTGEEVEDEDEEEEEGKKEDKT
VEGEKKEEVQKGKEIKEVVEGEKEMKEEEKDEEAKDEEEKSKALTEEEEK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcaaccaccctccccccccacactgtgccacttcacactgtaccacaactc
tccacagacagtgatgagtccagcgaggatgaccgaagtgcgcctgaatcaaatcatcat
tgtctgctcaatgtaaataacagcaataacaatgaagagaagaaaaagaaaaaaaggaaa
aaggagaaggagaagaaagaaaacaagaagaaggagaagaaggaaaaggaagcaaaggag
gcaaaagaaaaagaagacaaggaaaaggagaaggaaaaagaaaaagaagagaaggaaaaa
gaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaatgtaaaggacaaa
gataaacctgaagaaatatttgtcattaatccggctgggaatttgtattacaactggctg
ttcatcatcacactaccagtcatgtacaactggaccatgatcatagccagggcttgcttt
gaggagctgcagcatgactacatcatgtactgggttattctggactacacttcagactta
atctatctggctgatatgttcttcaggactcgaacaggttacttggagcaaggcctgatg
ataaaagataagaagctgctggttgatcgctacatcgccaccttccagtttcgtctcgat
tttatctccatgctgcccactgacttcctctatttcttcctcggcctcgactacccagag
attcgcatcaacaggctgctgagaatcggccgcatgatggagttcttcacaaggacagag
actaaaaccaactaccccaacatcttccgtattggtaatttgatcatgtacatcctcatt
atcatccactggaacgcttgcttctacttctccttctccaaatacatcggttttggtgct
gacgactgggtttacccggctttggatgatcctgatgagcctgcgtttggggagtttggc
aggaagtattcattcagcctctactggtcaacactgaccctgactaccatcggagaaact
ccacctccggccctggactcagaatttttcttccacgtgattgactttttagtaggggtc
ttgatctttgccaccattgtagggaacattgccaccatgatctccaatatgaatgctgcc
caagctcagtttcagtcccgtattgacaacatcaagcagtacatgcaggtccgaaaggtc
agcaaggaccttgagttgcgagtcatcaagtggtttgagtatctgtggaatagtggcagg
gctcaggatgaaagagaggtgatgaggtatcttccagacaagctaaaggctgagatcggt
atccaggtccacatggagactctcaagaaagttcgcatttttgcagactgcgaggcaggc
ctgctgatcgagctggtgctcaagctgcaagcacaggttttcagtccaggagactatatc
tgcaaaaagggcgatattggccgggagatgtacatcatcaaagatggaaaacttgcagtt
gttgctgatgatggtgtcacacagtttgttgtgttgggaagcggcagctactttggtgag
atcagtattcttaatattaaaggcagcaaagctggcaatcggcgaacagccaacatccgt
agcattggatactcagacctcttctgcctgtccaaggatgacctgatggagtcactgtta
gagtatccggatgccaaaggcatgctggaggagaaagggagggagatcctgatgaaagat
ggtttgatagatttggacccagctaacatcatacccgaggccaaggagttggaggagaag
gttaacaaattgtacagcacgttggagctaatgcaatttaagctgaagaaggttctggga
aattacaagaacactgacaaggctctgagacatcgcatcgcagatctggaacacctaaca
ggtgaagaggtggaagacgaggatgaggaagaagaagagggaaagaaggaagacaaaaca
gtggaaggggagaaaaaggaagaagtgcaaaaaggcaaggaaataaaggaagttgtagaa
ggtgaaaaggaaatgaaggaagaggaaaaagacgaggaagcaaaagatgaagaagaaaaa
agtaaagcgttaacagaagaggaggaaaaataa
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