Etheostoma cragini (Arkansas darter): 117955402 Help Entry 117955402         CDS       T07493                                  Name (RefSeq) protocadherin-16-like   KO K16507   protocadherin-16/23 Organism ecra  Etheostoma cragini (Arkansas darter) Pathway ecra04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:ecra00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     117955402  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ecra04515]     117955402 Cell adhesion molecules [BR:ecra04515]  Cadherins   Cadherin related    117955402 SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Ig_CLSTN Cadherin_CELSR2_9th Ig_Cad99C_N Cadherin_pro Fibulin_C TMEM154 CADH_Y-type_LIR Cadherin_C_2 C1orf162 Orf78 Motif Other DBs NCBI-GeneID:  117955402 NCBI-ProteinID:  XP_034745774 LinkDB All DBs Position 13:14268653..14350780 Genome browser AA seq 3306 aa AA seqDB search MPITSKGSRRRAWVSGTCMCSSLWRWKPLFYFCTILVLVQSTTVLGALELQLDEEQPAGT IVGDISAGLPPGETGGLYFISDHESTGVSNDLNIDETTGIITTARRLDREQRDHYSFIAV TMTGVTVEVSITVNDINDHAPVFPKKKALLKIPEHTAVGTRFSLEPATDADKDQLTTQGY AIPEGNVGQAFRLETKRAANKMLYLDLVVNGLLDREKRSFYTLVLEAFDGGSPRRMGSMT LEVTVTDINDHAPVFNQSRYHAIISESLQQGSSILQVFATDEDEGDNGLVLYEINRRQSD PDRIFVIDIKSGVITLNRPLDYELKRVHELVVQARDNASHPEVTNAFVTIHVRDYNDNQP TMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSI IYLIYVDQVLDREERDTYDLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQT IPEVVYPGSFVLQVTARDKDQGPNGDVRYSLLKIKNSHSDWFSIDPVTGIITTAMALDFE SEPAPSVTVVATDSGRPPLSSTAKVDIVLQDVNDNTPVFSSNFYNASIKENTPAGTCFLE VSATDEDRGSFGAISYILGSASGSAAPAHFTIDKETGQICTSTALDRDEGLEKFDLTVTA TDGGGLSSVARVRVSVVDINDNRPTFYPVLYTVSLSTHSAPGTSVVKVTANDPDAGENGR VTYRTVPAGGSGFFTLNKDTGVISLSRSLHGKANTVISMVISAEDGDGLTAPVSARVNVS VVGGSVVSPVFDQAQYFFTVSEDVLRGTAVGLVRATTKTGVPKNIFYSISTGDPDGYFTV DSASGTIRTALPLDHETCSSLDLEIQARSGSPPAYGTSRVRITISDVNDNAPTFLPSSSE SLLLPEITKMGNVIYSIQAIDKDSGHNGQLSFDLVSAGAAGSSGQRTFGVDRGSGEVRLI GSLSYESVPRYDLQVVAKDGGAPQLSSTFTLVVHIQAQDAQGPNFDTLTYRVELRENTAL NTRFLQVRALNSEASGNGGSSSSSSISSSIFYRLRPDGDAAGFGIMPDSGWLFVRSSLDR EVKDMYLLTVLATSGPGGVGRTGSATVRVTVTDENDNSPRLSQERVFLAVRENLLAGTGF GRVSATDRDAGLNARLSYRLLHTDRHFQINSQTGEISTRLALDREQQSSYQLVVVVQDGG TPPRSATGTAHITVLDENDHAPSFTHARPDRELLYQVMEGLPSGTVLGTVMAKDPDEGEN GTVYYSLSGSRAERFSLNPISGELRTASPLRWAERADYALTVTAADHGTPGLSSSCQLRI QVLSSSRSNPKPNMLSMTLNTVEGAAPGSIIGSVRPHDQHESIMLEGQVTYLVVGGTDQD GTFMVDRLKGDVYLVRELDYEKGSRYTLHIEVSDFSQAFPSSHLVQLDINVQDSNDHAPQ FTEDPVTIVVPENIATGASIYTFQAVDQDGSGPNSELRYSIEHYWPDTPGLLTLDPSSGV LTLGQKLDRESTPSFYLVVRATDQAVDPSQRRWGSVTARVFVTDENDNTPVFRSPSAVSV MEDQPVGFVILYVIARDEDEGENGRVSYRIQAGNSAGRFSMNPNTGSLSILKALDREEQE IFNLTIVAEDHGIPQLSTSQVLCVQVIDVNDEAPLFQRAELEALVMENQGPGTTVLTVTA TDRDQGSNGQVMYGGVTEDGFVINPVTGVITTTKELDAELQDHYTLTVYARDGGLPPNFA KTVVRVEVQDVNDNAPVFAKPWYGLEVPENQAPVELCFLKATDPDSGLGGELEYRITAGD PDGSFHLHASTGALSTSRGLDREIRAEYTLEVVATDRGSPAFSTTVTVEVKVLDVNDNSP VFSRISFSVEVSEDAAEGSKVLEVSATDADDNLNGRVLYFLSREAHGAFSVDQSTGVITT AAPLDREKRASYSFQVFAVDLSPAEPRNTSAQVTVTILDVNDNTPFFIQDPLVIEVSSMR SQRVLATMKAEDKDFGANGSVFYRFAMPVKGFSINSLTGEIQATEPLGDLTQAQRTLIVE AMDQGSPAQSAQGVVVIYVKEVAYSGIRFSRNARDVSLQENALQGTAVAQAQAQHPDGTR KGISYSLFSGNRKQAFSIISSTGEIMVQSSKGLDFEDTPRLRLVVKAETVFSTSFMAINL ILQDVNDNLPRFQLQNYVAYMREAQGYEMPIIQVMAEDVDQGQNGQVTYSIQSSGMSGLF KIDPMTGSITTAAIMDREIFTQTKLIVTATDRGSPRLAGSATLTVIIVDQNDNSPTIPLP QEIRIPENMLIGTEITLVTGNDVDSSPALSYSLQLDPTALGKFGIHRYSGGLSLTAPLDF EEKTWYTLTVRATDSQHQTEANITILVEDINDNAPAFTHDLYQVTLPEHTSPGTVVVTVT ATDRDSGENGKITYRVTSSTQEGFYIDPNNGTLFINHRAEFDPERQSVSIVIEARDGGSP SLSSLTTVQVHISDVNDNAPVFHQSEYRATVSEDTIPGATVLTFEAFDSDLSRENCGFDF AIANGNEGNSFQIESSVRFLEGRGFQTVGTLLLAEELDFETKPLYNLTVVVSDRGVPQRS SSVAAVITIGDVNDNPPVFSRAEYTVSLSEGAAAGTEIIRLTATDSDTTPNAEVQYTISS GDEVNLFTMDQWTGALRLQRALDREHQPTHIVVIQATDGQGHFALAPVIVEVKDVNDNHP FFPVEVLTASIRENQPANSAVTVLHAIDHDTGVFGQLKYYIVERSVAGKDSFTVDHNSGE IKSKMSFDFEKVNSFNFVAVAVDSGNHSATVTVQVFVTGEDEYDPLFTSSEFSFKVPEGA KKGQSIGQVQANDEDGGVDGIVLYSLSTISQYFDINKTSGVIFLKADGSGSSSSNGSGRT KREARLMALDVRAHSPLDASRTTTAQVSIDVSNTNFGLAPDVNILLISIIAVSLGFIILL VVMAVVVFIVKSRRRKKAQDAGNRTVASETALQKLDKCNSGPGGERIYHQALPGYAGDQS VAGGGPYTRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSG IQQDADQLSDISCEPAALEGSTWFKGKKLGGSLSGTLLSGQLPVYRDEGGGYLGVGRGLN ISLPKDYAFPEDGKPSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARL KDETAQQSQNPRQPFQPKHKMDPKPRIDPPPLITSVAHPGAMSVPPKVPVIGRTFPHLAS LRRSPISHEGSISSAAMSPSFSPSLSPLAARSPAVSPFGVNQGPSTSMISTREPSLDQSP DREMRI NT seq 9921 nt NT seq  +upstreamnt  +downstreamnt atgccaataacaagcaaagggtcaagacggagggcttgggtcagtggaacctgcatgtgt tcaagtctctggcgatggaagccactcttttatttctgcaccatccttgttcttgttcag tctacaactgtcctcggagcactggagctccagctggatgaagagcagccggcagggacc attgttggtgatattagcgctgggttaccgcctggtgaaactgggggtctttacttcatc tcggaccatgagagcacaggcgtaagcaacgatctcaatatcgacgaaaccacaggaatc ataaccactgcacgccgtctggaccgtgagcaaagggaccactacagctttattgccgtg acaatgacgggagtcactgttgaagtttcgatcactgtcaacgacatcaacgaccatgca cctgtgttccccaaaaagaaagctcttcttaagatccctgagcacacagcagtggggact aggttttccctcgagcctgcaacggacgcggacaaggaccagctgaccacccaaggctac gctattccagagggcaacgttggccaggcgttcagactggagaccaagagagctgcgaac aagatgctgtatctagacctggtggtcaatggactcctggacagggagaagcgctcattt tacactctggtcctcgaggcctttgatgggggctcacccaggcggatgggatccatgacc ctggaagtgactgtgaccgacatcaatgatcacgcgccggtctttaatcagagcagatac cacgctattatctctgaaagtctccaacaaggcagcagcatcctacaggtgtttgcaacc gatgaggatgagggcgataatggtctggtcctttatgaaatcaaccggcgtcagagtgac cctgaccgcatctttgtcatagacattaagtccggggtcatcactctgaataggcccctg gattatgaactgaagagggtccatgaactggtggtccaggccagggataacgccagccac cctgaggtgaccaatgcgttcgtgaccattcatgtccgtgactacaatgacaaccagccc accatgaccatcatcttcctcagtgaggacggctctcccaggatctccgaaggggcccaa ccaggccagtatgtagctcggatatctgtcacagacccagactatggagaatacgccaac gtgaatgtgtcccttgaggggggtgatgggaagtttgctctcacaaccaaggacagcatc atctacctgatatatgttgaccaggtcttggacagagaggaacgggacacgtatgacctg agggttatggccacagactctggcacgcctcccctcagggcggagtcatctttcaccatt caggtgactgatgtcaatgacaacccccctctgttcgaccagcaggcctacagacagact attcctgaggttgtctatcctggttcctttgttctacaagttactgccagggacaaggac cagggtcccaatggggacgtccgatatagtctccttaagattaaaaactcccactctgat tggttttccatcgacccggttacagggatcattaccacagcaatggctctggacttcgaa tcagagccagcacctagtgtgaccgttgttgcgacggatagcggccgaccgccattgtcg tccacagcaaaggtggacattgtgctacaggatgttaatgataacacacctgtgttttcc agcaacttctacaatgcctccatcaaggagaacaccccagctgggacctgcttcttagag gtgtcagccacagatgaggatcgtggttcctttggtgccatatcctacatcctgggttct gcctctgggagtgcagcaccggcccactttaccattgacaaggagaccggccagatttgc accagcacagctttggaccgggatgagggattggaaaagtttgacttgaccgtcactgca acggatggaggtggcctgagctcagtagcacgcgtgcgggtctcagtggtggacatcaat gacaaccggcccaccttctatccagtcctctacacagtcagtctcagtacccatagtgcc ccgggaacctctgttgtcaaggtaacagcgaatgatcctgatgctggggaaaatggcagg gtgacctaccgcacggtacctgctggaggctctggtttcttcactctcaacaaggacaca ggtgtgatttccctctctcgctcgctccatggcaaagccaacacggtaatctccatggtg atatcagccgaggatggcgatggcctgacggcgccggtcagtgccagggtaaacgtgagt gtggtgggaggctcggtggtgtctcccgtgtttgatcaggcccagtattttttcactgtg tccgaggacgtcctcagggggaccgcagtgggactggtccgagccactacaaagacaggt gttcctaagaatatcttctactccatctccactggggacccagatgggtacttcacagtg gacagtgcctctggtacaattcgcactgcccttcctctggaccatgagacctgctccagt ctcgacttggagatccaggcacgttccggctctcctccagcgtatggaaccagccgggta cgaattaccatttcagacgtcaatgacaatgcccccaccttcctcccgtcctcatcagag tccctccttttacctgagatcaccaaaatggggaatgttatctatagcattcaggccatt gacaaggactctggtcataacggtcagcttagctttgacctggtctctgctggggctgca ggcagcagtggccagagaacgttcggtgttgaccgagggagcggggaggtacgtctgatt gggagtttgtcatatgaaagtgtcccacgctatgaccttcaggtggttgccaaggatggc ggagcacctcagcttagctccaccttcaccctagtagtccacatccaagcccaagacgca caaggccctaactttgacacccttacgtaccgtgtggagctacgggaaaacacagctctg aatacacgtttcctgcaggttcgagcactgaacagtgaggcttctgggaatggtggaagc tcctcatcttcctccatctcttcctctattttctatcgccttaggcctgacggtgacgct gccggttttggcattatgccagatagtggttggctgtttgttcgtagctctctggaccga gaagtcaaggacatgtacctgttgaccgtcctggccacctcaggcccaggaggggttggg agaactggcagcgccacagtcagggtgacggtaaccgacgagaatgacaactccccaaga ctgagccaggagagggtgttcctagctgtcagagagaacctgctcgcagggacaggcttt ggaagggtgtctgcaacggacagagatgcaggactaaatgctcgactcagctacaggctg ctgcataccgacaggcactttcagatcaactcacaaacaggtgagatcagcacccgcctt gccctggacagagagcagcagtccagctaccagctagttgtagtggtacaggacgggggt acgcctcctcgtagcgccaccggcaccgctcatataactgtgctggatgaaaatgaccat gcccccagtttcactcacgccaggccggatagggagctgctctatcaggtgatggagggg cttccatctgggacagtcctagggacagtgatggctaaagatccagatgagggggaaaat gggaccgtatactactctttatcaggctccagagcagagcgtttctcccttaacccaatc agtggtgagctgagaaccgcttcccctctaagatgggccgaacgagccgattacgctctc actgtgactgctgctgaccatgggacaccaggtctgagctccagctgccagctacggata caggttctcagctcctctaggtccaaccccaagcccaacatgctctccatgaccctgaac acagtcgaaggagctgccccgggctccatcattggctctgtgcgcccacatgatcagcat gaatctattatgttggaaggccaggtgacctacctggtagtgggggggacagaccaagat gggactttcatggtggaccgtttgaagggcgacgtgtacctggtgcgcgagctggactat gagaaggggtcgaggtacacgctgcacatcgaggtgtctgacttctctcaggcatttccc agcagccatctggtgcagctggatatcaacgtgcaggatagcaatgaccatgctccacag ttcacagaagacccagttaccattgtagtcccagagaacatagcaacaggggcttccata tatactttccaggctgtggatcaggatggcagtggacccaacagtgagctgcgttactcc atcgagcactactggcccgacacgcctggcctcttgacccttgacccctccagcggagtc ctgactctggggcagaagttagatcgtgaatcaacaccatccttctaccttgtggtgcgg gcaacagatcaggcagtggatccttctcagaggcgctggggttcggtcactgcacgagtg tttgtgacagacgaaaacgacaacactccggttttcagatctccgtctgcagttagcgtc atggaggatcagcctgtagggtttgtgattttgtatgtgattgctcgagatgaagatgaa ggagaaaatggcagagtgtcttacagaatccaggcaggcaacagcgccggccgcttcagc atgaaccccaacactggctctctttctattcttaaagcactagaccgggaagagcaggaa atcttcaatctgaccattgtagcagaggatcatgggatacctcagctttccacttctcag gtgctgtgcgtgcaggtgatcgatgtgaacgatgaagctccattgttccagcgagcagaa cttgaagccctggtgatggaaaaccaaggaccaggaacaactgtactgacagttactgcc actgaccgggaccaaggttctaatggccaagtgatgtatggaggtgtgacagaggacggc ttcgtcatcaaccctgtgacaggagtcatcacaaccacgaaggaactggatgcagagcta caggatcactacacgctcactgtgtatgccagggatggagggctgcctcctaactttgcc aagactgtagtacgtgtggaggtgcaggatgtgaatgacaacgctccggtctttgcaaag ccatggtatggactggaggtgccagagaaccaggcccctgtagagctttgcttcctcaag gccacagaccctgactcaggtcttggtggagagcttgagtacaggatcactgctggggac cctgatggaagtttccacctccacgccagcacgggagccttatccacgtcacgcggtctg gacagggagataagggctgaatatactctggaggtggttgctacagaccgaggcagccct gctttcagcactactgtcacagtggaagtcaaagtgttggatgtcaatgacaacagccct gtcttcagcagaattagtttttctgtggaggtgtcagaggatgctgcagaaggatccaaa gttctagaggtgtccgccacagatgctgatgacaacttgaatggtagggtcctgtacttc cttagccgagaggcacacggagcgttcagtgtggatcagagcactggtgttatcaccaca gcagcacctctggaccgggaaaaaagagcgtcatacagcttccaggtgtttgctgttgac ctttcaccggctgaacccaggaacacctctgctcaggtgacagtcactatcctagatgtc aacgacaacacacccttcttcatccaggatccgctggtcatagaagtgtctagcatgcgt tcacaaagggtcctagccaccatgaaggccgaggataaggactttggagccaacggctcg gtgttttaccgttttgccatgccagtcaagggcttcagcatcaactccctgactggggag atccaggccactgagccactgggggatctgacccaggctcagaggaccctgatagtggag gccatggaccagggaagtccagctcagtctgcacagggcgtggtggtgatttatgtaaag gaggtggcgtacagcggcatccgcttctcgaggaatgccagagacgtcagcctacaggag aatgctttacaaggcacagctgtggctcaggctcaggctcaacatccagatggtacacgt aagggtatcagctacagtctcttcagtgggaacagaaagcaggcctttagcatcatctcg tcaacaggtgaaatcatggtgcagagctccaaggggctggactttgaagacacacctaga ctccgtctagttgtgaaggctgaaacagtgttctccacatctttcatggctatcaacttg atcctgcaggatgtcaatgacaaccttcctcgtttccagctgcagaattatgtggcctac atgagagaagcacagggatatgaaatgccaatcatacaggtgatggctgaggatgtggat cagggtcaaaatggtcaggtgacctactccatccagtcctcaggcatgagcggcctgttc aagatcgacccgatgacaggaagcatcacaacagctgccatcatggaccgtgagatcttt acccagaccaagcttatagttacagcaactgatagaggaagtccacgactggctggttca gcgacattaacagtaattattgttgaccagaatgacaacagtcccactattcccttgccc caagaaatccgcatcccagagaacatgttgattggcacagagatcactcttgtaacgggt aacgacgtcgactccagtcctgccctctcctactccctgcaactggacccaacagcctta ggcaagtttgggattcaccgctacagtggaggattatcactcactgcacctctggacttt gaggagaagacgtggtacacactgactgtcagagccacggacagccagcaccaaactgag gctaacatcacaatactggtggaggatattaacgacaatgcacctgcattcacccatgat ctttatcaggtaactctgcctgagcacacgtcaccaggaactgtggttgtcacagtaaca gccactgacagggactctggtgagaatggaaagatcacctacagagtgacgtcatctacc caggagggtttctacattgaccccaacaacggaaccctattcatcaatcacagagctgag tttgaccctgaacgtcagtcagtcagtattgttattgaagctcgtgatggaggttcacct tcgctctcctccctcactactgtccaggtccacatctctgacgtcaatgacaacgctcct gtgtttcatcagtcagagtacagggctacagtttctgaggacaccatcccaggagcaacg gttctgacttttgaggcgtttgacagcgacctctctcgagaaaactgtggctttgacttt gctattgccaatgggaatgaaggaaattcattccagattgaaagcagtgtacggttcctg gaaggacggggctttcagacagttgggactctgctgttggctgaggagcttgactttgaa accaagccactttacaacctcactgtggtggtgtcagaccgtggtgtgccccagaggagc tctagcgttgctgcagtgataactattggtgatgtgaatgataaccctccagtgttcagc agagcagaatatactgtgtctctgagtgaaggagcggccgctgggactgagatcatacga cttactgctacagactcggacacaactcccaatgctgaggtccagtatacgatcagctct ggtgatgaagtgaacttgtttaccatggaccagtggactggagccttgcggcttcagcga gcactcgaccgtgaacaccagcccacacatattgttgtcatccaggccacagatggacag ggtcattttgcacttgctccagtcattgttgaggtcaaagatgtaaatgacaatcatccg ttcttccctgtggaagtcctcacagccagtatcagggaaaaccaaccagcaaactcggct gtgactgttctacatgccatagaccatgacacaggggtttttggacaactgaagtactac attgtggagcgatctgtggcgggaaaagacagcttcactgtggaccacaactccggagaa atcaaaagcaaaatgtcctttgactttgagaaagtcaactctttcaactttgtagcagtg gcggtagattcaggaaaccactcagccactgtaactgttcaggtgtttgttacaggtgag gatgagtatgacccactcttcacatcttcggaattctcctttaaagtcccagagggagct aagaaaggccagagcattggccaggtccaggcaaatgatgaggatggaggggtggatggt attgttctctattctctttccaccatctctcagtactttgatataaacaaaaccagtggg gtcattttcctcaaggcagacggttcgggcagcagtagtagcaatggctcgggcaggacc aaacgggaagccaggctgatggccctggatgtgagagctcacagccctctagatgcatct cgcaccactacagcccaggtctccattgatgtctcaaacaccaactttggcctggcccct gatgtcaacattctgctgattagcattattgctgtgtctcttggttttatcatattgctt gtggtcatggctgtggtggtgttcattgtcaagtcacgcaggaggaagaaagctcaggat gcaggaaacagaactgttgcgtcagaaactgcactgcagaaattggacaagtgcaactca ggaccaggaggggagaggatctaccaccaggccttgccaggctatgctggagatcagagt gtcgctggtggtggaccatacactagagggggctctttggatccctctcactccagtgga agaggatcagctgaggcagcggaggatgatgagatcaggatgataaacgagtacccccgc gttgcctcaatcacctcgtccatgcaggagcacatctctgccagaggaccagactctgga attcagcaggatgctgaccagctctctgatatctcctgtgagcctgcagcattagagggc agcacctggttcaaaggaaagaaactgggaggcagtctcagtgggaccttgctctctggc caactcccagtctatagggacgagggaggagggtacctgggagtaggtcgtggcctcaac atttccctcccaaaggattacgccttccctgaggacggtaaaccttcagttgatggttcc ctcacagctattgttgccagtgatgaagaactccgcggaagctataactgggattaccta ctcaactggtgccctcagttccaacctctggctaatgtcttcacagagattgccaggctg aaagatgaaactgcccagcaaagtcagaaccctcgccaacccttccagcccaagcacaaa atggatccaaaacctagaattgaccctccgccactcatcacatcagtggcccatccaggg gccatgtcagttccccccaaggtccctgtgattggacggacattccctcacttggcttca ctccgcaggtcccctatcagtcatgagggatctatttcatctgcagcaatgtcccccagt ttttccccttcactgtcccctctggcagctcgatctccagctgtttctccctttggagtc aatcaaggaccctcaacatccatgattagcaccagggagccctcactggaccagagtcct gatcgcgaaatgagaatatga

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