Etheostoma cragini (Arkansas darter): 117955413
Help
Entry
117955413 CDS
T07493
Symbol
pdlim4
Name
(RefSeq) PDZ and LIM domain protein 4 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117955413 (pdlim4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117955413 (pdlim4)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117955413 (pdlim4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117955413
NCBI-ProteinID:
XP_034745788
LinkDB
All DBs
Position
13:18742405..18787923
Genome browser
AA seq
429 aa
AA seq
DB search
MTQSVTLKGPSPWGFRLVGGRDFSTPLTISRVTPGSKAAQGDLCPGDTILAINGDSTELM
THMEAQNRIKTCTQQLTLNISRSGSGDRVWSPTVSDDGKTSPYMEPDSQNFRPITSGYGG
SSRKPSYTAEPQHLQAPQYPQAPQYPQAPHYPQAPHYPQAPQYQQAPQSPQAPQYPQAPQ
SPQAPQYPQAPQYPQAPQSPQALQPTHLNNGHSRPNNGHSYGYGNGTGHTQFNNPAGLYH
NGSNGDRSLPSKMGGLSLSTTHSPEPPTQSPTGRNGFDPQSDVYKMLQDYEEPVSAPKQS
GSFKYLQGILEAEDGGVSPTDRMRNLKSPIRSPIPKLGSPIPSPMSGLQKLPQCTRCCNG
IVGTIVKARDKLYHPECFTCDDCGVNLKQRGYFFIEDSLYCETHAKARVQPPEGYDVVAV
YPNSKVELV
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacccagagcgtgacactaaagggaccctctccttggggttttcgactggtgggtgga
cgagatttcagcacaccgttaaccatctccagggtaacaccaggcagcaaggcggcccaa
ggtgacctgtgtccaggtgacaccatcttggctataaatggcgacagcacagagctcatg
acacacatggaagctcagaacaggatcaaaacctgcactcagcagctcacactcaacatc
agcaggtcgggatcaggagacagagtgtggtcgccaaccgtcagtgacgatggcaagaca
agcccatacatggagcctgactcccagaatttccgtcccatcaccagcggatatggcggt
tccagtcgcaaaccttcgtataccgctgaaccccagcacctgcaggctccccagtacccg
caggctccccagtacccacaggctccccactacccacaggctccccactacccacaagct
ccccagtaccaacaggctccccaatccccacaggctccccagtacccacaggctccccaa
tccccacaggctccccagtacccacaggctccccagtacccacaggctccccaatcccca
caggcactccagcccactcacctgaataacggacactccagacccaacaacggccacagc
tatggatacgggaacggaaccggtcacactcagtttaacaacccagcaggactttatcat
aatggcagcaatggagacagatctctgccaagcaagatgggaggccttagcctcagtacc
acacatagccctgaacctcccacacaatcccctacgggccgtaatggttttgacccccag
tcagacgtctacaagatgctgcaggactacgaggagcccgtctctgcacccaaacagtcc
ggctccttcaaatacctccagggaatcctggaggctgaggatggaggtgtgtccccaaca
gacagaatgagaaacttaaagtctccaatcaggtctccaatccccaaactgggaagccca
atccccagccccatgtctggtcttcagaagctaccccagtgcacacgctgttgtaatggc
attgttggcaccattgtgaaggcccgggacaagctctaccaccccgaatgcttcacttgc
gatgactgcggcgtcaaccttaagcagagaggctacttcttcatcgaggacagtctgtac
tgtgagacccacgccaaggcccgcgtccagcccccagagggctacgacgttgttgcagtt
taccctaactccaaggtggagctagtctga
DBGET
integrated database retrieval system
