Etheostoma cragini (Arkansas darter): 117955504
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Entry
117955504 CDS
T07493
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117955504
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
Other
117955504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_6
C2-set_3
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
117955504
NCBI-ProteinID:
XP_034745933
LinkDB
All DBs
Position
13:10254723..10308686
Genome browser
AA seq
2116 aa
AA seq
DB search
MGGAEALPISPACLAGQQGWRDLRGAQSPVQHGDPPGQKTAPHTCQDCQIFLKNIPAIYG
MWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPAGGTPSAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIVPGNRFSLTTFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTILDSFQAGEVHAG
QSIELPCIAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLKQEDSGSYACEVTNSF
GSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTINWYSNTEPIIPDQH
ISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVN
PGEPFSLMCGAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRDG
GVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVIGYPYYSIKWLK
DGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVSVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDDQLIVPGSASGVAIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAGVLNCSVEGYPP
PKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACVY
SIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVILQPMTSQSIRVTWRAPRKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKYAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSEPPQNVRAISVTSDEAVITWSEPPRLTLHGVLKGYRVVFWSLFPDGG
GCCGGQAQWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQ
TREDLPGPPAGIKAVPSSSSSVVVSWLPPHKPNGVIRKYTIYCSSPGSGQPAPSEYEANP
EMLFYRITHLTRGKQYHIWSAAVTTAGRGNISSKVTVEPAGKVPAKILSFGGTVTTPWMK
EVRLPCSSVGEPAPTIKWTKDSEDSASPVTADSQRQILSNGTLVLRSVKAEDSGYYTCTA
TNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNT
EEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKDQ
PLLTHINSTHAGLNLQGWTSGGCPITDMMLDFRPKGTWAWQSLKANSTTQLFLSELREAT
WYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTLG
VALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLL
IEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRPG
TNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGSHGITATESDSY
SASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQ
MTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLPL
YMKTDPFFRKQGELHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPAKQQVLTLGHSGL
SSLGASSGTATLPQRTLTMPSSNTAATASTSSTSSNPTNSNKVGGSRDSLLESSSSALGR
LQKQSVGAYSKSYTLV
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggctgaggcgcttcccatttcccctgcatgcttagcggggcagcagggctgg
agagacctccggggagcacagtcgccagtccagcacggagacccgcctggccaaaaaacc
gcgcctcacacttgccaggattgccaaatattcctgaaaaatatacctgctatttatggc
atgtggcttgtaactttactcctgctgtactctctccaagaagtacacagtgaggatgtg
ggctccaccaggctgtactttgtgaatgcctccctgcagagggtaacctactccagctcg
gtgggggtgtccctgccctgtccagcagggggcacccccagtgccatactgcgctggtac
ctggccaccggcgacgacatctacgacgtgccccacatccgccacgtgcacgccaatggc
accctacagctgtaccccttctccccctcggcctacaacagctacatccacgacaacgac
tacttctgcactgccgaaaaccaagccggcaagatccgcagccccaacatccgcatcaaa
gctgttttcagggagccctacaccgtgcgggtggcggatcagcgctcgatgcggggcaac
gtagctgtgttcaagtgcctcatccccgctgccgtgcaggagtacgtcagcgtcgtgtcc
tgggagagagacactgtttccatcgtaccaggtaacaggttctcgctgaccacctttggg
gctctttacatctctgatgttcagaaggaggatgccctctccacataccggtgcatcacc
aaacataagtacagcggcgagacgcgccaaagcaacggagccaggctctctgtgatggac
cccaacgagtcctcacccaccatcctggacagtttccaagcaggggaagtgcacgcaggc
cagagtatcgaactcccctgcatagcaggagggtaccctagccccactgtgcgttggctt
aaagatggtcgcccgctgccctcggatgcccgctggacacggcgtttgacagggctgacc
atcagtgacctgaagcaggaagacagcggcagctacgcttgcgaagtcaccaacagtttt
ggctcaaaggaggtgtctggacagcttcacgttatagatcccctacgagtgaccttgtcc
cctaagaatctgaaaactggcatcagcagcacactgtttttcacctgcactgtggagggc
tctccagaatacaccatcaactggtacagcaacacagagcccatcatccctgaccagcac
atctccatccagggacaacacaacgacaccttgcagattactgcagcacagaagttccac
tctggggcctaccaatgcttcgcctcccgaaagggccacactgctcaggacttttccatt
attctgctagaggatggaactcctcgtattgtgtcttccttcagtgagcgggtggtaaac
cctggcgagcctttctccctcatgtgtggggccaaaggagccccacccccttccatcacc
tggacgctggacgacgagcccgtggtccgggactccacctacaagaccagccagtacacc
ctgtcagacggcttgaccgtgtcacacgtcaacgtcagcagcccgctcattcgagatggg
ggagtgtatcgttgcgtcgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggtccaccccgaatcagacccatgcgggacatcactgcagtggcgggcagg
aacacctacataacgtgccgtgtaattggctacccgtattactccatcaagtggctgaag
gacggcatgcagctgcctgataatcatcgtcaagtggtgtttgagaatggcacccttagg
ctgacggacgtgcagaagggcgcggacgagggcacctacttgtgtagcgtcctgatccag
ccccaggtgtcaatcaaccagaccgttcatgtctctgtcaaagtgccgccgctcatccaa
cccttcgatatcccctctacctcagtggggaagctcatgtacattgcctgtgtggtgtca
tctggggacatgcccatacgcatcacctggcacaaagacgaccagctcatcgtgccaggc
tccgcctctggcgtcgcaatagagaccaaagagttcatgagctccctgcaaatatccaag
gtgacactgaagcacaacggaaactacacctgcatcgccagcaacgccgccgccactgtc
agctgggaaagacagttgattgttactgtgccaccacgttttgtggtgcagcccaacaat
caagattgtatctatggcaaggctggcgttctcaactgctctgtggagggttacccacct
ccaaaagtcatgtggaaacacgccaaaggtgtaggaaaccctcagcagtaccacccagtc
cctctcactggccgtatccagatcatgtcaaacggctctctgctcatccgacacgtgctt
gaagacgaccgagggtactacctctgtcaggcctccaacggagtgggctcagacatcagt
aagagcatgatcctcactgtcaagattcccgccatgatcaccagccaccccaacaccacc
atggcgaggaagggccagaccaaggagctgaactgcacagcacgcggcgagcagcccatc
atcatccgctgggagagaggagacaccgtcatcgatgctgagagaaacccccgttactct
ataaccatcaacaagaagggggacgaagtcatctctacccttaagctcaacccagccgag
cgaggagattctgtcttcttctcctgccacgccatcaactcctatggagagggtcgaggg
ctcatccaacttactgtgcaagaaccaccagatccccctgaactggaagtaagggaggtg
aaggacaggagcatgaacctgcgctggatccaaaggtttgatggaaacagcatcatcaca
agctatgacattgagtacaagaacaagtcagattcctgggatcatatgtatacaaccaga
aacatctcaccgaccaacaaccaggccaacattgtagagttgcacccggcttgtgtttac
agcattcgaatgtactcctacaacaagataggccgcagccttcccagcaaagagctcaca
atcagtactgaagaagcaccgcctgacgggccaccaatggatgttatcctccaaccgatg
acatctcagagcatacgggttacatggagggctcctaggaaggagctgcagaacggggtg
atccgagggtaccagatcggttacagagagaatggtccaggcagcaacggccagtacagc
atagtagagatgaaagctacaggggacagcgaagtgtacaccttggacaacctaaagaag
tatgcccagtacggggtagtggtccaggccttcaacagagccgggacgggtccatccagt
actgagatcaacgccaccacgttggaagatgtgcccagtgagccgccgcagaacgtgcga
gccatctctgtgacgtcagacgaagcggtgatcacgtggtcagagcctccacggctgacg
ctgcacggtgtgctgaaaggctaccgggttgtgttttggtccctcttccccgacggaggt
gggtgctgtgggggccaggcccaatggccaatgcagaaatggggagagatgcagaatatc
accaccacacgggaacaggtggagctgcgagggctggagaagttcaccaactacagtgtt
caggtgctggcctacacacaagctggagacggggtccgcagtaatgtcctgtatatccaa
acccgcgaggaccttcctggtccaccggctggcatcaaggcagttccctcctcttcgagt
agtgtggttgtgtcctggttgcctcctcacaaacccaacggtgttatccgcaagtacacc
atctactgctccagtccggggtctgggcagccggcccccagtgagtacgaggccaaccca
gagatgctcttctatcgtatcacgcaccttacccgtggtaaacaataccacatctggtct
gcagccgtgacaactgccggccgaggcaacatcagctcaaaggtcacagtggagcctgct
gggaaagtcccggctaagatcctgtcctttggaggcacggtgaccacaccctggatgaag
gaagtgcgtctgccctgcagctcagtgggagaacctgcccccacaattaaatggaccaaa
gacagtgaggactcggccagtccggtgacagctgatagtcaacggcagatcttatccaac
ggcacgctggtgctgcgttcagtcaaagcagaggattctgggtactacacctgcacggcc
actaacaccctgggctttgacaccatcatagtcaatctggtggtgcaagttcctcccgat
cagcctcgtctgacagtctccactacctcaacctcttctatcaccctggcttggatccct
ggggacaatgggggaagctccatcagaggatttgtgctgcagtattctgtggataacaca
gaggaatggagggatgtgtttatcagctccagtgaacgttccttcaggctggacaatctg
cgctgtggaacctggtacaaggtcaagctggctgccaagaacagcgtgggctcagggcgc
atcagtgagatcattgaggctaagacacatgggagagaaccagtgttcaataaggatcag
ccgctgctcacccacatcaactccactcatgccgggctcaacctgcagggctggaccagc
gggggctgccccatcactgacatgatgctggactttaggcccaagggtacctgggcgtgg
cagagtctcaaagccaactccaccactcagctcttcctcagtgagctgcgtgaagccacc
tggtacgagctcaaaatgaaggcatgcaacagtgctgggtgtggcaaccagagctcccag
ttcgccaccaccgactatgatggcagtacaatccctcccattaaatcggctcgtggagaa
ggggatgacgtgaagaagctgttctccattggctcccccgtcatcctggtcactcttggt
gttgctttgctcttcattatccgcaagaaacgcaaggagaagaggcttaaaagacttaga
gatgctaagagcctggcagagatgcttatcagcaagaacaatcgcagtatagacactcca
gtaaagggccctcctcaaggaccaaggctccacattgacatcccacgtgttcagctactc
atcgaggacaaggaaggcatcaaacagataggggaggacaaggctgcagtgccagtaaca
gacactgagtttagccaatcagtgaatccacagaacttctgtacaggcgtgtctctgcac
caccaagcccttatccagaactcagggcctttgattgacatgtcagacatccgcccaggc
accaaccccgtgtccaggaagagtataaaatcagcccacagctccaggaacagatattcc
agccagtggacactgagccgaccgagtcagagccagtcgacggcctcggcgcgaactctg
acctccgactggcggacgatgggctctcacggcatcaccgccacagaaagtgacagctac
agcgccagcctctcgcaagacacagataagggtcgcaacagcatggtgtcgacagagagc
gcctcgtccacctatgaagagctggcgagggcctacgagcacgccaagctggaggagcac
ctgcagcacgccaagttcaccattacagagtgtttcatctccgatagctcatccgaccaa
atgaccacaggtaccaatgacccggcagacagcatgacctccctcagcacgccatctgaa
cctggcatctgccgcttcactgcctcgccgcccaaaccgcaggactacgaccgtggtaaa
aacgtggctgtgcccattccccaccgcgctaacaaaagtgaattctgcaaccttcctctc
tacatgaagacagacccgttctttcgcaaacaaggggagctgcatgacccgtgcccggca
gtgccaccgcgggaagcctcgatccgcagcctgacgcagcgggcgtatcacacccagggc
cgtcacaagactctagaccctgccaagcagcaggtcctgacgctgggccattctgggctg
agcagcttgggtgcgagctcgggcactgccaccttgccccagaggactctgaccatgccc
agctccaacacggctgcaacagcttccacttccagcacgagcagcaaccccaccaacagt
aacaaggtggggggctccagagactcgctgctagagagcagctcctctgcactggggaga
ctgcagaaacagagtgtgggggcctactccaagtcatacacactggtgtag
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