Etheostoma cragini (Arkansas darter): 117955505
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Entry
117955505 CDS
T07493
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117955505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117955505
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117955505
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117955505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
PA
Motif
Other DBs
NCBI-GeneID:
117955505
NCBI-ProteinID:
XP_034745936
LinkDB
All DBs
Position
13:1542677..1620233
Genome browser
AA seq
825 aa
AA seq
DB search
MIVPPRRLAGLWPWLLMAALQLVLGQPGLESERPALRAVIKVALLNHEPAGKTITLQGLF
VGGSAGYAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELRETDSLPRPVVLVEAEDAEELMGLVNKNEEAKVRIEIMGEQP
TWPHYDVGILLTIVLAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAISRLETKTYSSQGC
SGSQHHQAPWGSGSSSNSSPVCAICLEDFQDGQHLRIISCAHEFHKECVDPWLLQHRTCP
LCMHNIMGTERQPQRNRLQQSVEQSQSFLHPQPYSSPRNHPFPQHAIPFSMRPHYPRGPS
GHYPSLGHYTSSSPMDAQTLRFLTSRPLASGCGYHLPVEGPGRPHRIGGNCRSSTHHYAS
RRSCHNYRSSCPAQRSASSSRLQHTASVTPQPRGAPAHSRQDDASCSGGSYHTERSGYMA
DGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGPGRAP
RRNSLEADAQARPRSLDSVVNKAGCPEEQPQTVFSHIHFHRHRHHHYEEGEHSQGPSRGS
DEEQGGVAAAAAAAAAAAATPAPLVLDKDLPVCPPKHSPCQCPKPDPTDRPSPGTECQDH
DLSSPAGPPVSCLVPLQLQPHCCHQGHGHTPAPLGRVGGCVLDGTSVRFHQSLDLQDDRS
IHIHYGQGPGFCCSPPELHPALLPVPLILDSGGMEDWPCYAGAHVVWQKRVQQAHSEPQL
LGPGTSMDRPPCRFQHGPGADRNTDICLYCQTLHYNQGSEEESGV
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtccccccgcggcgcctggccgggctctggccgtggctgctcatggcggccctg
cagttggtgctgggccagccgggcctggagtccgagcggccggccctccgagctgtcatc
aaggtggcactgctgaatcatgagccggcggggaagaccatcaccttgcaagggttgttc
gtgggaggaagtgccggctacgcggagggaaaactaatgcagtatcaccctctgtctctg
tgcaacacaagcgaggatgaacgacaagagagtgacttcatcactattgtcaaactggag
cacagggtaccccgctgtctgccgctgctcgataaggctcgcatggcattggacaaaggc
gctcaggctgttatcttcgatgtcagtgatgatgccaacgctgctgctgagctgcgagaa
accgactcccttccccgtcccgtcgtgctggtggaggcggaggacgctgaggagctgatg
ggtttggtcaacaagaacgaggaggccaaagttcgtattgagatcatgggggagcagcct
acatggccacattacgatgtgggcatcctgctcaccatcgtcctagctattctgaccatc
gtcctgatatttgcgttccgctacaagtgcaagtccaacaggacctgggactctgtccat
cagcagaccatgcgggccattagtcgattggagaccaaaacctacagctcccagggctgc
tcgggctctcagcaccaccaggccccctgggggtcgggcagcagctccaactcgagccct
gtatgtgctatctgcctggaggacttccaggacggccagcatttgaggatcatctcttgc
gctcatgagttccacaaagagtgtgtcgacccctggctgctacaacaccgcacctgtccc
ctctgtatgcacaacatcatggggacagagcggcagccccagaggaacagactccagcag
agtgtggagcaaagccagagtttccttcaccctcagccttacagcagcccacgcaaccac
cccttcccccagcacgccatccccttctctatgaggccccactatcctcgtggaccctct
ggacattatccttccctgggccactacaccagctcttctcccatggatgcccaaacacta
cgtttcctaaccagcaggccgctggcgtccggctgtgggtaccaccttcctgtagagggc
ccagggaggccccacaggattggaggtaactgcaggagttccacccaccactacgcatca
cgccggtcctgccacaactataggtcatcctgtccggcccagcgcagcgcatccagctca
agactgcagcacacggcctccgtcacaccacagccgcgtggagcgccggcccatagccgg
caggacgacgccagctgctcgggcggcagctaccacacagaacgcagcggatacatggcc
gatgggccggccagtgactccagctcagggccctgccacggctcctctagcgactcagtt
ctcaattgtactgacgtgtccctgcagggggtttatggcagttggtccaccttccgaagc
tctctgagcagtgattatgatccgtttgtgtattacgggccagggcctgggcgcgcccct
cgcaggaacagcctggaggccgatgcccaggcccggcccaggtctctggattctgtggtg
aacaaagcgggctgccccgaggagcagccgcagactgtgttcagccacatccacttccac
cgccacagacaccaccactatgaggagggggagcacagccagggcccgagcagaggctcg
gacgaggagcaggggggcgttgctgctgctgctgctgctgctgctgctgctgctgcgaca
cctgctcctctagtcctggacaaagacttgcctgtctgccctcctaagcacagtccctgc
cagtgcccaaagccagaccccacagatcgacccagtcctgggactgagtgtcaggaccat
gacctcagcagccctgcaggacctcctgtttcctgtcttgtcccattacagcttcaaccc
cactgctgccaccaggggcacggacacactcccgctcctcttgggcgagtgggtggctgt
gtgcttgatgggacctctgtccgcttccaccagagcctagatctgcaggacgaccgtagc
atccacatccactacggccagggcccgggcttctgctgctcccctccggagctgcaccct
gcattgctccccgtgccactcattctggactctggaggtatggaggactggccttgctat
gccggggcccatgttgtgtggcaaaagcgggtgcagcaggcacactcagagcctcagctc
ttggggcctgggacctctatggacaggccaccctgccggttccagcacggccctggtgcc
gaccgcaacacagacatttgtttgtactgccaaacactacactacaatcagggatcagaa
gaggagtctggtgtgtga
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