Etheostoma cragini (Arkansas darter): 117955527
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Entry
117955527 CDS
T07493
Symbol
f11r.1
Name
(RefSeq) F11 receptor, tandem duplicate 1 isoform X1
KO
K06089
junctional adhesion molecule 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecule (CAM) interaction
ecra04517
IgSF CAM signaling
ecra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117955527 (f11r.1)
04517 IgSF CAM signaling
117955527 (f11r.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117955527 (f11r.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117955527 (f11r.1)
04090 CD molecules [BR:
ecra04090
]
117955527 (f11r.1)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
CTX family
117955527 (f11r.1)
CD molecules [BR:
ecra04090
]
Proteins
117955527 (f11r.1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
V-set
ig
F13C5_C
C2-set_2
Syndecan
S1FA
MLANA
ASFV_P17
Motif
Other DBs
NCBI-GeneID:
117955527
NCBI-ProteinID:
XP_034745960
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All DBs
Position
13:11010441..11020648
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AA seq
327 aa
AA seq
DB search
MSTFCSLFQESSKKQTQSCCWKRKKLVEMHVSGLVSVALFFFAATGVSGFSVTTSNPDVQ
VKENDGTDLKCTYSADFGSSPRLEWKFKDLKDSQSYVVFDGKPTSPYASRVTLYGSNLRF
SKVTRVDNGVYYCEVTGNDGHFGEVEVKLTVLVPPSPPLCRIPDSVTTGGVAMLSCNDAA
GSPPPQYNWYKDGVLLPADPNKISGFKNATYRLNAKTGNLEFPALTKMDSGQYFCEAFNT
AGPPQRCAVKSMEVRDLNTGGIVAGVIVALLLVILLVLGVWYANKKGYLPKKKESKPKPS
VVYQPTSLHGGGEEEDGEFKQKSSFVV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcactttctgttcccttttccaggagtccagtaaaaaacagacgcagtcgtgttgt
tggaaaaggaagaaactggtcgagatgcatgtcagcggtttggtttcggtggctttgttc
tttttcgcagcgacaggtgtaagcggcttttcagtcaccaccagcaaccccgatgtgcag
gtgaaagaaaatgatgggactgaccttaaatgcacgtattcagccgactttggttcaagc
cctagacttgagtggaagtttaaggatctaaaagactcacagtcgtatgtggtctttgat
gggaaaccaacatcgccgtatgccagccgagtgacattgtacggtagtaatctgagattc
tccaaagtgacccgcgttgataatggagtgtattactgcgaggtgactggcaacgacggc
cactttggggaagtcgaagtgaagctgactgttctggtgcctccatctccgcccctgtgt
aggatccccgactcggtgacgaccggcggggtggccatgttgtcctgcaatgacgctgcc
ggctcaccgccgccccaatacaactggtacaaagatggcgtccttctgcctgctgatcct
aacaagatttctggtttcaaaaatgccacctacaggcttaatgcaaagactggcaacctg
gagtttccggctttaaccaagatggactccggtcagtacttctgtgaggctttcaacact
gctggtcctcctcagcgctgtgcagtcaagtcaatggaagtccgtgacttaaacactgga
ggaattgttgctggggtaatagtggctctgctgctagtgatcctgctggtacttggcgtt
tggtatgccaacaagaaaggatacctgcccaagaagaaggaaagcaaaccaaagcccagc
gtggtctaccagcccacgtcattgcatggtggtggtgaggaagaagatggggaattcaaa
cagaagtcatcattcgtggtttag
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