Etheostoma cragini (Arkansas darter): 117955530
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Entry
117955530 CDS
T07493
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117955530 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117955530 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117955530 (ncor1)
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117955530 (ncor1)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
117955530 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
117955530
NCBI-ProteinID:
XP_034745965
LinkDB
All DBs
Position
13:complement(2024949..2079420)
Genome browser
AA seq
2407 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPPHSVQYTFTGTRHQQDFAIPDYRNHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSISSQSEHEALDSKRPRMETVAEAHITRTPPTAGGIVL
PMNHTGQDSLRATVDFKKESQFNVKLESQSSVGPTLHLGSEQDASPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLLDDP
MKVYKARQFMNVWTEHEKEIFKEKFIQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQQITRPSQEEKTDDKNEEDKSEKSDKKEEEEKKDEEEKDEKEDSR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPPA
PEPALPDPPQLPKSDPMQKSMKEPTKPQTPVVSMDANKAGAGETGETSRWTEEEMEVAKK
GLVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGDG
LATVSPDDDDDDDDEDDNAEDSEGGDNSSDTESAPSPSQSADSKRTDRTAGDAHSSDQDK
GQASNGKPLEPLYGELCVKEEKSPESETGSQEEKARMTSYVGSVHPKTEPQDVDMKTGEV
QVKMEPELKERGEKGDHGERHREINSDNDSSATCSADEDVDAEPERQRMFSMERPTLLNP
PGSVLVSSPKQTQLNIQQMQHRAANIPPMVHGPFGGVPISGFAMLQHQIKAVHESAHQEE
KQRQDQGDLERRAPFNTRSPTVIDRDGKPLPYMPYDMKLALDQEVHSGRPGSPYRLSPRE
LSKASPQPDPNASRYSVPPVLHPAPNQLVQSMADGVRVTFSRPSRPPNIPSPPPLIPTTK
PTDKPSFIQGGSISQGTPGTYLPSHAVYGPEGTKSNVGSISLGLPRQQDPNKPGAAVPSI
QDGRGNQAKMGEGLTMRGSITQGTPALPQSSIAADLLKGTITKLATEDLSSQDKARGEQL
SKGHVIYEGKSGHILSYDAIKNPRENTRSPRSGLELKRTYDMMEGPMSRGHPGREGAPFE
GLISRALPREGLHGDSKERPLITGSIMQGTPRTAAETYEDAMKYGKQIKIESPPIRSFEG
GIGKGKPYEGVNTIKEMGRSIHEIPRQEQSGQDICKTPELSDRRVIEGMSQMHPLNQSTI
KHNVKSLITSPSKHPHSMPQLEAMERAKYEENKAVRHTVVNSTASVLRSTHQEAGKSQLS
PSMYEDANARRTPVNYSTNPVSRGSPMLGRTPEGVGSSAKSAAHERKSAMTPTQRDSVPA
KSPVSGGDPVGSHSPFDPHHRPVGPGEVYRAHLPPHLDPSMAFHRVLDPAFMFPRQPSPT
GYHNTYQLYTMENTRQTILNDYITSQQMQVIRPDMARGLSPREQPVAMPYAAGARGIIDL
AQMPPTILLPHPGGTGTPTLERIAYLPGSQPPFPLRAFNPTSISPGHQAHLAAAAAASAE
RERDREQQEKEREREQREREQREREIRERERTNEYIRGGVPEQPGRPGSRGYLHSPSPSL
RTQQDVVVQQQQQQRPSIFQGKSVITSLMPHTAAATATAQSSSRYSTAADALAALVDAAA
SAPQMDVSKVKENKHEREDEMSSSAAARRAASLSELHEAERRSMQSPYGAMSLPGGKPHP
AYSEGPGVGIKDKGHPTSKSRIEEELRTRGKTTITAANFIDVIITRQIASDKDSRERGSQ
SSDSSSSLSSSRYDNTGGGAIEVISPASSPVQPQQDKPEEGQQQAAAAGMRPYDISRYRP
SGEPPQPSPQHPPSSQIDSYSQVPKTHRVMTLADHISHIITQDFARNQDPPPVSSSSSAT
FQSLMPPVSSSGRAKVSSRYSPENQVQAPHHQRSTSRVSPENAPDKPRARPGKSPERGGR
QMENYEPISPPQSYQGMDKQEMVGPPPQRREADNSELRTDSRSPGSVSYLPSFFTKLENT
SPMVKSKKQEIFRKLNSNSGAGDSDVGNAQPGTEIFNLPAVTSSSSINTRNHSFSDPASN
LGLEDIIRKALMGNLEEKPEDHQGGLGAQGAINNTPCTGSEARQEANRSPSMGKQKPGKA
NSRKSKSPNLGQSYTGGERPSSVSSVHSEGDYHRQAQAQPQWSWDDRPSSTGSMQFPYNP
LTMRILSSTPPTSIASPSIQSQQQKQQQQQQQQQQPPPPPTGAPVAQQRVWQSLLSEQYE
TLSDSDD
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccgcccagccagggcagcttcagcagtgagcagagccgg
tacccaccacattctgtccagtacaccttcactggcacacgccaccaacaggatttcgcc
atccctgactatcgaaatcacatgcaagatccacagggtcggagaagaccatctttactg
tctgaattccaccctggaacggaaaggcctcctgagagacgccatggttacgaacagcag
tttcactccatctcatcccagtctgaacatgaggctttggattctaaacgtcctcgcatg
gagactgttgctgaggcccacatcacccgcacgcctcctactgctgggggtattgtcctg
cccatgaaccacacaggacaggacagtctaagagccactgtggacttcaaaaaggaatct
cagtttaatgtcaaactggagtcccagtcctcagtaggtcctacactacacttgggcagt
gagcaggatgcctctccttccaaactatccaaggaggagctgatccagagtatggaccgt
gtggacagagagattgctaaagtggagcagcagatcttcaaactgaagaaaaagcagcaa
caacttgaggaggaagcagcaaagccagtggagccagaaaagccagtgacccctccccca
gtggagcacaagcatcgcagcatagtccagatcatctatgatgagaacaggaaaaaagct
gaagaggcccataaaatactggaaggtctcggtcctaaggttgagctgcccctttacaat
cagccctcagacacaaaggtgtaccatgacaacatcaagaccaaccaagtcatgaggaag
aagctaattttgttttttaagaggaggaaccacgctcgaaaacaaagggaacagaagatc
tgccagcgttacgaccagctgatggaagcgtgggaaaaaaaggtggagcgaatggagaac
aaccccagacgcaaagccaaggagagcagaacacgggagtactatgaaaggcagttccct
gagatccgcaagcagagagagcagcaggagcgcttccagagggttggacaaagaggaacg
ggcctttctgcaacaatagcaagaagcgagcatgagatttctgaaattatagatggtctt
tctgaacaagagaacaatgaaaaacagatgagacaactgtcagtcatccctccaatgatg
tacgactctgagcagcggcgagtgaagtttatcaacatgaacggcctgttggatgaccca
atgaaggtgtacaaagccaggcagttcatgaatgtttggaccgaacacgaaaaggagatc
tttaaggagaagtttatccaacaccccaagaactttggccttattgcctcctatctggag
agaaagtgtgttgctgactgtgtcctttactactacttgaccaagaagaaccataactac
aagacgctggtgaggcgaaactatggaagacggagaggaaggaaccagcaaataacacgt
ccctcacaagaagagaagactgacgacaaaaacgaagaggacaaatctgagaaatctgac
aaaaaagaggaagaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagg
gacattggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggaacaa
aacacgccgcgtggcaggaagactgccaatagccagggccgccgtaagggaaggatcacc
acacgctccatggccaatgaggctgcatctgtggcggctgaggaggcacctccccctgcc
cctgagcctgccttgccagatcctccgcagctcccgaagtctgatccaatgcagaagtcc
atgaaggagcctacaaaaccccagactccagtagtttccatggatgctaataaagctggt
gctggtgaaaccggagaaacttctcgctggaccgaggaggagatggaggtcgccaaaaaa
gggctagttgagcacgggcgaaactggaccgccattgccaaaatggtgggcaccaaaagt
gaggcacagtgcaagaatttctatttcaattacaagagacgtcacaacttggacaacctg
ctccagcagcataagcaggacacacggcgggctcgtgctgataggtctcaaggtgacggt
cttgccacagtgtcacctgatgatgatgatgatgatgacgatgaagatgacaatgcagag
gacagtgaaggcggtgacaacagctcagatacagagagtgctccctccccctctcagtct
gccgactccaagagaacagaccgcactgcaggagatgctcattcctctgaccaggacaaa
ggtcaggccagtaatggaaagcccctggagcccttatacggagaactttgtgtcaaggaa
gagaaaagcccagagagtgagactggatctcaggaggaaaaagccaggatgacttcctat
gtaggctcagtgcatcccaaaaccgaaccgcaagatgtggacatgaagaccggagaggtt
caggtcaagatggagcctgagcttaaggagagaggagaaaagggagatcatggtgagagg
catagggagatcaactcagataatgactccagcgccacctgcagtgctgacgaggatgtg
gacgcagagcctgaaagacagagaatgttctccatggaaaggcctacgctcctcaaccct
ccaggctcagtgctggtgtcctcacccaagcaaacccaactcaacatccagcagatgcag
caccgggcagctaacatcccacctatggtgcatggtccctttggtggtgtgcccatcagt
ggctttgccatgttgcaacaccagatcaaagcagtgcacgagtccgcacaccaagaggag
aagcagaggcaagatcagggagacctggagcgcagagcgcccttcaacacccgcagcccc
accgtaatagacagagatggtaagcccctaccctacatgccttatgacatgaagctggct
ctggaccaggaggtccattctggccggccaggctctccctacagactctcccctagggag
ctgagcaaggcctcaccccaacctgaccccaatgcctcccgctacagtgtgccaccagtc
ctccatcctgcccccaaccagcttgtccagagcatggcagatggagttcgcgtcacattc
agcagacccagtcgacctcccaacattccctctcctcctccactcattccaaccaccaag
cccacggacaagccctccttcatccaaggaggctccatttcccagggaactcctggaaca
tatctgccatcccatgctgtctatgggccagaggggactaagagcaatgtgggctccatc
tctctgggtctgcctcggcagcaggatcctaacaagcctggagctgcagttccatccata
caggatggcagaggcaaccaagcaaagatgggtgaaggtctgactatgagaggatccatc
actcagggcacaccagctctgccccagtccagcattgctgctgacctcctgaagggcaca
attacaaagttagccacagaggacctgagcagtcaagacaaggcaaggggtgaacagctg
tctaagggtcatgtcatctatgaaggcaagagtggtcacatcctatcctatgatgccatc
aagaaccccagggaaaacacccgcagccccagatcaggccttgagctgaaacgcacgtac
gacatgatggagggacccatgagcaggggacatcctggcagggaaggagctccattcgag
gggttgattagcagagccttgcccagagaaggtctacatggagattctaaggaaagacca
ttgatcacaggatccattatgcaaggaacacctagaactgcagcagagacttatgaagat
gccatgaaatatggaaaacaaataaagatagagagcccaccaatccgctcctttgaaggg
ggtattggcaagggcaaaccctacgagggagtcaatactatcaaagagatgggacgctcc
attcatgaaatccccaggcaagaacagtctggccaggacatctgcaagacccctgaactg
tcagacaggagggtaattgagggcatgtctcagatgcaccctctcaaccagtctactatc
aagcacaacgtcaagtccctcatcaccagtccgtctaagcatccccacagcatgcctcag
cttgaggccatggaacgagccaaatacgaggagaacaaggcagtacgccacactgtggtc
aactctactgcctccgtcctgcgctccacacaccaggaggccggcaaatcccagcttagc
ccaagcatgtatgaggacgccaacgctcgcaggacccctgttaactacagcaccaatccc
gtctccagaggatcacccatgttgggacgtacaccagagggtgttgggagctctgcgaaa
tctgctgcacatgaaagaaagagtgccatgaccccgacacagagggacagtgtcccagcc
aaatccccagtgtcaggtggtgaccctgtaggctctcacagtccatttgacccccaccac
cggcctgttggtcctggggaagtttacagagcccacctgcctccacatctcgaccccagc
atggcctttcacagagtgctggatcctgcattcatgttccccaggcagccatctccaaca
ggctaccacaacacctaccagctgtacaccatggagaacacgcggcagacaatcctcaac
gattatatcacttctcagcagatgcaagtcattcgacctgacatggccagagggctgtca
ccacgggaacagcccgtcgctatgccttacgcagccggagctcgagggattattgatcta
gcccagatgcctccaactatcctgttgcctcaccctgggggaacaggtactcccactttg
gaacgcatcgcctacctccctggatctcagccccctttccctcttagggctttcaaccca
acctccatatcgccaggccaccaagcccaccttgctgctgcagccgctgccagtgcagag
agggagcgtgacagggagcagcaggagaaagagagggaaagggagcagcgggagagggag
cagcgggagcgagaaatacgagagcgggagagaaccaacgaatacatccgcggaggtgta
ccagagcagccaggccggccagggagtcgaggttatctgcattccccctctccctcgctc
aggacacagcaggatgttgtggttcagcagcagcagcagcagcggcctagcatcttccag
ggcaagagtgtcatcacctctctgatgccccatacagcagcagcgacagcaacagcacag
agtagctctcgctacagtactgcagctgatgctctggctgctctggtggatgccgcagcc
tctgccccgcagatggacgtgtccaaggtgaaggaaaacaaacatgagcgggaggacgaa
atgtcttcgtcggccgcagctcggcgagcagccagcctctccgaactgcacgaggcagaa
agaaggtccatgcagtcaccctacggtgctatgtctttgcctggaggtaaaccccatcca
gcttactctgagggccctggagttgggatcaaggataagggccatccaacctcaaagtct
cgcatcgaagaggagcttcggactcgtggaaagacgactatcacagctgctaacttcatc
gatgtcatcatcacacgacagatagcctcggacaaagactcacgagagcgaggctctcag
agctctgactcgtccagcagcttgtcatccagtcgatacgacaacaccggtggaggagcc
attgaggtgattagtcctgctagttcaccagtccaaccgcaacaggacaaaccagaggaa
ggacaacaacaggcagcagcagctggcatgcggccctatgacataagtcgttaccggcca
tcaggggagccaccacagcccagtccccagcatcccccctcttcccagattgacagctac
tcacaggttcccaagactcaccgggtcatgaccttggcagaccacatttcgcatatcata
acccaggactttgcccggaatcaggaccctcctcctgtctcctcctcatcttcagccaca
ttccagagcttgatgccacccgtgtcctcttcagggcgagccaaggtgtccagccgctac
agtcctgagaatcaggtccaggcccctcaccaccagagatccaccagcagagtttctcca
gagaatgcccctgacaagcccagagccaggccaggaaaatctccagagcgaggcggcagg
cagatggagaactatgaacccatctctccaccacagagctaccaaggcatggacaaacag
gagatggttgggcccccgccccagaggcgagaggctgacaactccgagctcaggactgac
tcacggtccccggggagtgtcagctatctgccttccttcttcaccaagttggagaacacc
tcgccaatggtaaaatccaagaagcaagagatctttcgtaagttgaactccaactctggt
gccggtgattctgatgttggaaacgcacaaccaggcacagagattttcaacttgcctgct
gttacaagctccagcagcatcaacaccaggaatcactcttttagtgaccctgccagtaac
ctgggcctggaggacatcatccgcaaagccttgatgggcaacttggaggagaaaccggaa
gatcaccaaggcggacttggggctcagggagcaatcaacaacacaccctgcacaggcagt
gaagcacgccaggaggccaaccggtcacccagtatgggaaagcagaaaccgggcaaagcc
aacagccggaaatccaagtcacctaacctgggtcagtcctacactggaggggagcgtccc
tcctcagtgtcctccgtccactccgagggagattatcaccgacaagcccaagcccagccc
caatggagctgggacgaccgaccctcatccacaggatccatgcagttcccttacaacccg
ctgaccatgcgcatactgagcagcacgccacccacctccatagcttccccctccatacag
agccagcaacagaagcagcagcagcagcagcagcagcagcagcagccgccgccccctcca
actggagccccggtggcccagcagcgcgtgtggcagtctctgctgtcagagcaatacgag
accctgtctgacagcgacgactga
DBGET
integrated database retrieval system
