Etheostoma cragini (Arkansas darter): 117955532
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Entry
117955532 CDS
T07493
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
KO
K04551
ubiquitin B
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
ecra04137
Mitophagy - animal
ecra04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117955532 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117955532 (ubb)
04137 Mitophagy - animal
117955532 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117955532 (ubb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117955532 (ubb)
Ubiquitin system [BR:
ecra04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117955532 (ubb)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of breast milk
117955532 (ubb)
Exosomal proteins of other body fluids (saliva and urine)
117955532 (ubb)
Exosomal proteins of colorectal cancer cells
117955532 (ubb)
Exosomal proteins of bladder cancer cells
117955532 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
117955532
NCBI-ProteinID:
XP_034745976
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All DBs
Position
13:2093320..2101362
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AA seq
307 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV
KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
LRLRGGQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctcactggcaagaccatcacccttgaggttgagcccagc
gatacaattgaaaatgtcaaggccaagatccaggacaaggaaggcatcccccccgaccag
cagaggctgatctttgccggcaaacagctggaagatggccgcaccctctctgactacaat
atccagaaagaatccaccctccatcttgtcctgcgtctgaggggaggtgcaaacatgcag
atttttgtcaagaccctcactggcaagaccatcaccctggaggtggagcccagcgacacc
attgagaacgtgaaggccaagatccaggacaaggaaggcatcccccccgaccagcagagg
ctgatctttgctggcaagcagctggaagatggccgcaccctctctgactacaacatccag
aaggagtccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttcgtcaag
accctcactggcaagaccatcaccttggaggtggagcccagcgacaccattgagaatgtt
aaggccaagatccaggataaggaaggcatcccccccgaccagcagaggctgatctttgcg
ggcaaacagctggaagatggccgcaccctctctgactacaacatccagaaagaatccacc
ctccatttggtcctgcgtctgaggggaggcatgcagatcttcgtcaagaccctcactggc
aagacaatcaccctggaggtagagcctagtgacaccattgagaacgtgaaggccaagatc
caggacaaggaaggcatcccccccgaccagcagaggctgatctttgccggcaaacagctg
gaagatgggcgcaccctctctgactacaatatccagaaagaatccaccctccatcttgtc
ctgcgtctgaggggaggccagtaa
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