Etheostoma cragini (Arkansas darter): 117955714
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Entry
117955714 CDS
T07493
Name
(RefSeq) transcription factor SOX-2-like isoform X1
KO
K09271
transcription factor SOX15/30
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117955714
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117955714
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117955714
NCBI-ProteinID:
XP_034746272
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Position
13:16103299..16106013
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AA seq
393 aa
AA seq
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MDVYPKKREREQRLPTGNTGQDPAATTAFQIFQTGDAGQLPTLAGTGYRPRSSICETYMA
LVGTSSEFEGGKLPPISTFFNELLYKVVSAEDRGSGIRSETVPSGSCPEAGSQVSAEQLL
SSGDQIFLLQVTEKLHKRQACPAGGENRLKPDPVDPTHSLGGDAPVTTYTIPPTEEDLKR
LQSGQDKNGHIKRPPNAFIVWSHIHRNALRKTRPRANMSDISIVLGCEWSKLSEEQKGPY
YEMAHKLKYMHRQQFPDYEFRPQKKKDIECLSSGQGAGQDPGASFSPVQSQLQGPSMYPY
PAMRAHRVSYCPASCPYHRMGPYSRVQSNCPRFFYGYPNVYSSMEEVRNYHNTLHRTASE
SIEQPDVVSSQQLSVNNNTKCKYEHDVDVVGLL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatatcctaaaaaaagggaacgagaacagcgtctgccaaccggaaacacgggc
caggacccagctgcgacaaccgcttttcagatctttcaaaccggagatgctggtcagctt
cccacgctggccgggaccggatataggcctaggtccagcatttgtgaaacctacatggcc
ttagttggaacaagttctgaatttgaaggtggaaagctaccacccatatcaacttttttt
aacgaactactttataaagttgtgtcagcggaggatcgtggcagcgggatcaggtcagaa
actgtcccttcaggttcatgtccagaagcaggttctcaggtcagtgcagagcagctgctt
tcatctggggaccaaatattcctgctccaagtcaccgagaagctgcataagagacaggcc
tgtccagctggaggagaaaacaggctgaagccagatccagtcgaccccacccactcactc
ggaggtgatgcaccggtcaccacttacaccatcccgcccacggaggaagatctgaagcgg
ttgcagtctggccaagacaagaatggacacattaaacggccaccaaatgcctttatcgtg
tggtctcatatccaccgaaatgccctgcgtaaaacccgccctagagccaacatgtctgac
atcagtattgtgctgggctgtgagtggtccaagctcagtgaggaacagaagggaccctac
tatgaaatggctcacaaactgaaatacatgcataggcagcaattccctgattatgagttt
cgcccccagaagaagaaagacatagagtgtttgtcctcagggcagggagcaggacaggac
cctggcgcttccttttctccagttcagtcccagttgcagggccccagcatgtacccatat
cctgccatgagggcccacagagtcagctactgcccagcttcttgcccatatcatcgaatg
ggcccctactccagggtccagtccaactgtccaaggtttttttatggatacccaaatgtc
tacagctcaatggaggaagtgaggaattaccacaacactctgcatcgaaccgcatcagaa
agcattgagcagccggatgttgtctccagtcagcagctttcagtcaacaacaacacaaag
tgcaaatatgagcatgatgttgatgttgttggactgctctag
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