Etheostoma cragini (Arkansas darter): 117955744
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Entry
117955744 CDS
T07493
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117955744 (supt6h)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117955744 (supt6h)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117955744 (supt6h)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117955744 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
117955744
NCBI-ProteinID:
XP_034746324
LinkDB
All DBs
Position
13:complement(15627137..15644474)
Genome browser
AA seq
1748 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFLEEDDEEEEENTEDQDERGNLRGLIDDGDEE
EEGEEEGPAGSASGAGSDSEEEVRHRRKKRNYDDYLDEDDLDLIEENLGVKVKRRKKKYD
RVKTLDDDEEDDDEKDLIADEIFHGDAEGELEEGEAVDEPLHHADDDEEGEDEESDIDDF
IVDDDGQPITKKKGKKFSGYTDAALQEAQEIFGGDFDFADFDADTYDQGEEEEEDQDEEG
WDRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDD
ELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFE
VPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFRKMQSYQYEQISADP
DKPLADGIRPLDTADIERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKASKKRLKKI
KEVSEDGEEEELEVEEEEEPKAPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENL
RDSYQRHETEQFPAEPVELAKDYVCSQFSTPETVLEGTRYMVAMQIAREPLVRHVLRQTF
QERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGEQFLKMCLAEDEGLLSIDIC
IDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQMAKELK
SKLITEAKESIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSR
DTPVFCALINGEGEVVDFLRLPYFMKRRNAFKEDEREKKAHDIENLKRFLSGKKPHVVAV
AGENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSEVDFRDYPPLL
RQAVSIARKIQDPLMEYAQVCSSDDDILCLKLHPLQEHVVKEDLLCALYCEFINRVNEVG
VDVNKAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFIN
CAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALE
EILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVVYRVPNTEEVF
NLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPELS
EVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKI
DIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQEEELKKKQQRTPYIKRVI
AHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKEN
AFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQECNWGSKEKMEELLVKT
KREKPTFIPYFISACKDLPGKFILGYQPRGKPRVEFVTITPDGFRYRSQVFPTVNGLFRW
FKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNAIAAV
TGQGQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPS
QQALGTPQYPGSTPQSSHSHTTHGHPHGSHVSHHGHHTSHQGHSSGTPSSSTSSRGRTPQ
QQPPKASGSNASAVDWGKMAEQWLKEKEAEGRKKAQRMTPRPSPSPMIESTPMSIAGDAT
PLLDEMDR
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttattgagagcgaggctgaggagtcagaagaggagtttgaagagaaagac
ctaaagcctaaaaagacccagaggtttttggaggaagatgatgaagaggaggaagagaac
acagaggaccaggatgaacgaggaaatttacgtggacttattgatgatggagatgaggag
gaggagggggaggaagaaggacccgcaggaagtgcaagtggagctgggagtgactcagaa
gaggaagtaaggcatcgacgtaaaaagcgcaattatgacgactacctggatgaagatgat
ctggacctaatcgaggaaaacttgggtgttaaagtgaaaaggaggaagaagaaatatgac
cgcgtaaagacactcgatgatgatgaagaagatgatgacgagaaggacttgattgcagat
gaaatctttcatggtgatgcagagggcgagctggaagaaggggaggctgtagatgagcct
cttcaccatgcagatgacgatgaagaaggagaggatgaagagtcggatatagacgatttc
attgtggatgatgacggccaacctataaccaaaaagaagggcaagaagttttcaggatac
acagatgcagccctccaggaggcccaagaaatttttggtggggactttgactttgctgac
tttgacgcagacacatacgaccagggtgaggaggaggaagaggaccaggatgaagagggt
tgggaccgacctaagaagcagaccaagcggaggcaagggaggaagagcatctttgaaatc
tacgagcccagcgagctggagagtagtcacatgactgaccaagacaatgaaattcgctct
acggacatgcccgagaggttccagttacgatccattcctgttaaacctgctgaggatgat
gagctagaagaggaagcagagtggatcttcagacatggcttctccactcttactatttct
atgcaggagagcacagattatctagaccgggggaccacgacaaacttcagcaggaaaggc
cccagtacaattgccaagatcaaagaggccctcaacttcatgaggaatcaacaatttgag
gttccattcatagctttctacagaaaagaatatgtggagccggaactgaacattaatgac
ctgtggaaggtgtggcagtgggatgaaaagtggactcaactgaagactcggaagcagaac
ctgacccgtctgtttcggaagatgcagtcctaccagtatgagcagatctcagctgatccc
gacaaacctttggctgacggcatccgtcctctggataccgctgacatagagaggctgaaa
gatgtgcagactcttgaagagctgggtgatgtgtacaaccactttctgctctactatggc
cgagacatccccaagatgcagaatgctgccaaggctagtaagaagaggcttaagaagatc
aaagaagtgtctgaggatggtgaagaagaggaattggaggtagaagaagaagaagaacca
aaagcacctgacctcaagctggcttctcgtagagatatgtatagcatttgtcagagcgta
ggacttgatggcttggctaaaaagtttgggttaactccagagcagtttggagaaaatcta
cgagacagttaccagcgtcatgagacagagcagttcccggctgagcctgtagagttggcc
aaagattatgtttgcagccagttcagcactcctgagacagtgctagaaggaaccaggtac
atggtggccatgcagattgctcgtgaacctctggtcagacatgttctccgacagaccttt
caggagagggccaagatcaatatcaagcctacaaaaaagggcaaaaaggaggtagacgag
gctcattttgcctactccttcaagtatcttaagaacaaacctgtaaaagagctgaacggg
gaacaattcttgaagatgtgcctggcagaggacgaggggctgctttccattgacatctgt
atagaccttataggggtcaaagggtatgctggggaccagacatactttgatgagatcaaa
cagttctactacagggatgagttcagtcaccaggtgcaggagtggaacaggcagcgaacc
ttagccatagagagagctctcactcagttcctctaccctcagatggcgaaggaactcaag
agcaaactcatcactgaggctaaagagagcattgtcaggtcctgctgtcgtcggttgtat
aactggctcaaggtggctccttaccgaccagatcagcaggttgaggaagacgatgatctg
atggatgagagtcagggcaaagggattcgggttctgggtgtagcctatgcgcccagcaga
gacacaccagttttctgtgctctgatcaacggggaaggggaggtggttgactttttgcgt
cttccttatttcatgaagaggaggaatgcctttaaggaggatgagagagagaagaaggcc
cacgacattgaaaatctcaagaggtttctgtcaggcaagaaacctcacgtggtagctgtc
gctggggaaaaccgagatgctcaaatgatcatggaggacatcaagaggactatcagcgaa
cttgagcaagagtcctctctgcctgctgtgggagttgaacttgttgacaatgaattggcc
acactgtacatgaacagcaagaagtctgaggttgattttagggattaccctcccttgcta
cgacaggcggtgtcgatagccaggaagatccaggatccgctgatggaatatgctcaagtt
tgcagcagtgatgatgatattctctgcctcaaactacacccgctacaggaacatgtggtg
aaggaagatttgctctgtgctctttactgtgaattcatcaaccgtgtcaatgaggttgga
gttgatgtgaacaaagccattgcccatcctcacactcagagcctggtccagtatgtctgt
ggcctgggacctagaaagggctcccacctgctcaagattctgaagcagaacaacactcgt
ttggaaaacagaacccaactggtcacgatgtgtcacatgggaccaaaggtttttatcaac
tgtgccggtttcatcaagattgacacggcatcgctcggggacagtacggactcctacatc
gaggttctggacggctctcgtgtccatcctgagacgtacgagtgggctcgcaagatggct
gtggatgccctcgagtacgatgagtcggcagaagatgccaacccagctggagctctggag
gagatcttggaaaatccagaacgtctcaaagatcttgacctggatgcctttgctgaagag
cttgagagacagggttatggcaacaaggggattactctgtatgatattcgtgcagagctg
agctgcaggtacaaagatttgagagttgtctacagagtccccaacactgaggaggtcttc
aacctcctcaccaaggagactccagagaccttttatattggtaagctgatcaccagtata
gtaactggcattgctcaccggcggcctcagggagagagctacgaccaggccatacgtaac
gattctacagggctgtggcagtgtcccttctgccagcaggacaactttccggaactcagc
gaggtgtggaatcactttgacagcggttcgtgtccaggtcaggccattggcgtgcggtcc
agattagataatggcgtccagggattcattcccaccaagtttcttagtgacaaagtggtc
aaacaccctgaggagagggtcaaggtgggcatgacagttcactgccgcatcatgaaaatc
gacattgagaaatttagtgtcgacctcacatgccgaacctcagatttgatggacaaggcc
aatgagtggaagctccccaaggacagctactatgactttgatacagagtctgaagaccaa
aaacaagaggaggagctaaaaaagaaacaacagagaacaccatatataaagcgtgtgatc
gcccaccccaacttccacaatatcagttttaaccaggcagagaaaatgatggagaccctg
gaccaaggagacttgatcatcagacccagcagcaagggagagaaccacctcacagtcacc
tggaaggtggctgatggcatctaccagcatgtggatgtaagagaagaaggcaaagaaaat
gcattcagcttagggcacacactctggatcaataatgaagagtttgaagatctggatgaa
atcactgctcggtacattcagccaatggcatcatttgcccgggatctactggggcataaa
tactttcaggagtgcaactgggggagcaaggagaaaatggaggagttattggtcaagaca
aagagggagaagcctacttttattccttactttatttcggcatgtaaagatctgccagga
aaattcattctgggctaccagcctcgcggaaaaccacgagttgagtttgtgaccatcact
ccagatggtttccgctaccgttcacaggtatttcctacagtgaacggactattccgctgg
tttaaggaccattaccaagagcctgttccaggcatcactcccagcaacagcagccgaaca
aggacacctgcgtccctcaacgccaccccagccaatatcaacatcgcagacttgacacga
gctgtcaacgccctcccacgcaatatgacctctcagatgttcaatgccatcgccgcggtc
acaggccaaggccagaaccccaacaccacccccgctcagtggggctccagccagtacggc
tacggtggcagcacaggaggaggaggagggagctcctctgcttatcatgtatttgcaaca
cctcagcagcccatggcaacacccatgatgacacccagctactcctacaccacaccgagc
cagcaggccctgggcacgccccagtaccccggctccaccccgcagtcctcccactcacac
accacacatggccacccacatggaagccatgtgtcacaccacggccatcacactagtcac
caaggccattcatccggcacgccgtcgtcctccacctcatccagaggacgtactccacag
cagcaaccgccaaaggccagcggcagcaacgcctctgcagtggactggggcaagatggcg
gagcagtggctgaaggagaaagaagcagaggggcggaagaaagcccagaggatgacgcca
cgaccgtcgcccagccccatgatcgagagcacacccatgtcaatcgcaggagacgccacg
cccctgctggacgaaatggaccgatag
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integrated database retrieval system
