Etheostoma cragini (Arkansas darter): 117955817
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Entry
117955817 CDS
T07493
Symbol
msx2b
Name
(RefSeq) homeobox protein MSH-D
KO
K09341
homeobox protein MSX
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117955817 (msx2b)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
117955817 (msx2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Pox_F17
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
117955817
NCBI-ProteinID:
XP_034746428
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Position
13:16957618..16959958
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AA seq
278 aa
AA seq
DB search
MTSQETFNDIGCSSSEEDSNRSDLAEGTAEEKTSPVVPRHHPFSVEALMSGRKTDGRGGE
SIRCKPERSSVAVSPTGLNSLYLYREACSPPGGSRTSLTAVPLSPVKSEASESEDCVPWV
TKSVFSTQPRHVSPGCPLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSS
LTLTETQVKIWFQNRRAKAKRLQEAELEKFKMASDAKTAAVAAAGGLHNGFTLPLSLGAM
SLYGQSYAAYQHHHRHILPFSPVGMYATPLGYSMYHLS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcaagagacctttaacgacatcgggtgcagttcgtccgaggaggacagtaac
cgttcagacttggcagaggggacggcggaggaaaagacatcgccggtggtgccgcggcat
catccgttcagcgtggaggcgctcatgtccgggaggaagacggacggtcgcggcggagag
tccattcgctgtaaaccggagcgaagctcggtggcggtgtctcccacaggtttaaactcc
ctatatctgtaccgagaggcgtgtagtcctccaggtggaagccggacgagcttaacggct
gtgcctttgtcgccggtcaaatccgaggcatcggagtcagaggactgcgtaccctgggtc
actaaaagcgtgttttccacacagcctcgtcatgtcagtcctggctgcccgttgaggaaa
cacaagaccaaccgaaagccccgcactcccttcaccacgtctcagctcctggccctggag
aggaagttcaggcagaagcagtacctgtccatcgcagagcgggccgagttctcctcctcc
ttgaccctgacggagacccaggtgaagatctggttccagaatcggcgggcaaaagccaag
aggctccaggaggccgagctggagaaattcaagatggcctcagacgctaagacggcggca
gtggcagccgctggaggtttacacaacggctttacattaccgctgtcgctaggcgccatg
tcactctatggacagtcgtacgctgcgtatcagcaccaccacagacacatacttcccttt
tcacctgtaggaatgtacgctactcctctggggtacagcatgtaccacttatcataa
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