Etheostoma cragini (Arkansas darter): 117955921
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Entry
117955921 CDS
T07493
Symbol
slc23a1
Name
(RefSeq) solute carrier family 23 member 1
KO
K14611
solute carrier family 23 (nucleobase transporter), member 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
117955921 (slc23a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117955921 (slc23a1)
Transporters [BR:
ecra02000
]
Solute carrier family (SLC)
SLC23: Na+-dependent ascorbic acid transporter
117955921 (slc23a1)
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Gene cluster
GFIT
Motif
Pfam:
Xan_ur_permease
Motif
Other DBs
NCBI-GeneID:
117955921
NCBI-ProteinID:
XP_034746603
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Position
13:26093039..26107431
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AA seq
610 aa
AA seq
DB search
MDEACKSRDQPAEGRSHKDRVILPMKDVITKRPIRGQGAGSDMIYTIEDVPPWYLCILLG
LQHYLTCFSGTVAVPFLLAEAMCVGRDQNTISQLVGTIFTTVGITTLIQTTVGVRLPLFQ
ASALAFLVPAQAILSLDRWKCPSEETIYGNWSLPLNTSHIWHPRIREIQGAIIVSSSVEL
LIGLCGLPGLLLEYIGPLTITPTVSLIGLSVFTTAGDRAGSHWGLSTLCIFLIVLFAHYL
RETSLPVPVYRRKKGLSSTRVQIFKMFPIILAIMVVWLVCYVLTVTDMLPSDPDCYGHKG
RTDARGDIMASSPWFRVPYPCQWGLPVVTVAAVLGMLSATMAGIVESIGDYYACARLSGA
TPPPVHAVNRGIFTEGVCCIIAGLLGTGNGSTSSSPNIGVLAITKVGSRRVVQYGAGIML
VLGSVGKFTALFASLPDPILGGMFCTLFGTITAIGLSNLQMVDLNSSRNLFVLGFSIFFG
LMLPTYLDTHPNSINTGLAELDQIFTVLLSTEMFVGGFLAFCLDNTIPGSRQERGLVVWR
SPSSSSSSSSSSSSYDLPLGMDVIRRTRWLRRFPISPSFTGFWASDASLRDEEGREEEEA
SDADKSTTRM
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagcctgtaagagccgtgatcagccggcagaggggcggagccacaaagacaga
gttattctgccgatgaaagatgttataacaaaaaggccaatcagagggcagggggcggga
tcagacatgatttacaccatcgaagacgtcccaccctggtatctgtgtattctcctggga
ctacagcattacctgacgtgcttcagcggcactgtggcggtgccgtttctactggccgag
gccatgtgtgtcggccgagaccagaacaccatcagccagctggtcgggacgattttcacc
actgtgggaatcacaactctgatccagaccacagtcggagtcaggcttcctctgtttcag
gccagtgcgttagcgttcctggttcctgcccaagcaatcctcagtctggaccgctggaag
tgtcccagtgaagaaacaatttatgggaactggagtcttcctctcaacacctcacacatc
tggcatccacgcatcagagagatccagggggccatcatcgtctcgagttctgtggagctt
ctgattggtctgtgtgggttgccaggtttgctgctggagtacatcggccctctcaccatc
actccaaccgtctcactgattgggctgtctgtcttcaccacagctggagacagagctggg
tctcactggggcctgtctacactgtgtattttcctcatcgtgctgtttgctcactacctg
agagagacgtcactacctgttcctgtttacagacggaagaaaggcctgtcgtccaccaga
gtccagatcttcaaaatgtttcctatcatcctcgccatcatggtggtctggctcgtttgt
tatgttctcacggtaaccgacatgttgcccagcgaccctgattgctacggacacaagggc
cggacagacgcccgcggggacatcatggcttcatctccctggttcagagtaccctacccc
tgccagtgggggttgccagtggttacggttgctgcggtgttggggatgttgagtgccacc
atggctggcatcgtggagtccattggtgattattatgcctgtgctcggctgtctggagcc
acgccccctccagtccatgccgtcaacaggggaatattcactgaaggtgtctgctgcatc
attgctggtctattagggacaggaaatggctcaacctcctccagtcccaacataggcgtt
ctggccatcaccaaggtgggcagccggcgggtggtgcagtatggcgcaggtatcatgtta
gttttgggatcagtcgggaagttcacggcactgttcgcctcgctgccggatcccattctt
ggaggaatgttctgcacgctgttcggtacaatcacagccatcggcctatctaacctgcag
atggtggatctgaactcgtcaaggaacctttttgttcttgggttctccattttctttggt
ctgatgttgcccacgtacctggacacacaccctaactccatcaacacaggtctcgctgag
cttgatcagatcttcactgttcttctgtccactgagatgtttgttggaggttttctggct
ttttgtcttgacaacacaataccaggatcaagacaggagcgagggctggttgtgtggcgg
tctccctcctcctcttcctcctcctcctcttcctcctcctcctatgatcttcctctgggg
atggatgtgatcagacggactcgctggctcagacggtttcccatcagcccctccttcaca
ggtttctgggcgtctgacgcctctctgcgcgacgaagaggggagagaggaagaggaggcc
tcggacgctgacaagtccaccaccaggatgtga
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