Etheostoma cragini (Arkansas darter): 117956137
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Entry
117956137 CDS
T07493
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117956137 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117956137 (zgc:163098)
Spliceosome [BR:
ecra03041
]
Complex A
U2 snRNP components
U2 related factors
117956137 (zgc:163098)
Complex B
117956137 (zgc:163098)
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Motif
Pfam:
Surp
cwf21
RRM_1
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
117956137
NCBI-ProteinID:
XP_034746945
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Position
13:complement(11580963..11594603)
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AA seq
876 aa
AA seq
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MADRKGKPVTPIKTLTKKEQEELKKKEEEKAAEVFEEFLASFESSKKSAVKTFVRGGIVN
ATKEEEAAEDTKSKLYRPATKFVPVSQHVSPVSSSESKKSAFKRKTEEKKKSNLELFKEE
LKLIQEEREERYKKKKNDSGGGGGFGDLDTPLSGRSSLYDDLTVPTTTNLYISCISPKMN
EEILCKEFGKYGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERALASLDGKVIMGL
EMKLGWGKPARIPPQPLYTPVGVRATPPPPSGLPFNAQPRDRFRNDFTKPLGMSKGELDK
TLSEAVVKVVIPTERNLLFLIHRMIEFVVREGPVFEAIIMNKEKSNPDYKFLFDNKSQDH
VYYRWKLFSILQGQSPTEWRTADFRMFRGGSMWRPPIINNYSQRGEDREEVVEEDASPEE
ELKKGQLRAEHRQRLETLLKELTPGREDIGNAMLFCLQRADAAEEVVGHITESFSLLQTP
LQKKIARLYLVSDILHNSCAKVASASYYRKYFETKLTQIFGDLNAAHKNIQARLQAEQFK
QKVMSCFRAWEDWAIYPEPYLIHLQNIFLGFAKAVEESTEKVKEAPFCVDGAPMDRPPID
GLPLHRAPVDDLDGCPLGWDPLDGVPVDDIDGVPLGVAIDDIDGMPLEESNVPLSRVPLS
KWETTGDAGIFSQAKTESKWDMVVEHNSDDKVNVSVNSQDGVEDSDSDSSEDSGSSSDFQ
SSLTSFQMSESKRKRLRELEVKVMKIQDELESGKRPRKTGMSIQQQVEHYRNKLQEKEFK
KDEEKNERSTSKSKDKSKEDRRDKDKSKRSEDGARRRGWSKDPDDQTRKSRSISPLKTRS
PKWSKRSRSPSPDRKAGKSRSRSPHRSHKKAKKSKH
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagaaagggaaaacctgtcactccgatcaaaacactcacaaagaaagaacaa
gaggagctcaagaaaaaggaggaagaaaaagcagcggaggtttttgaagaatttttggcg
tcttttgaaagcagcaagaaaagcgcagtgaaaacctttgtccgtgggggtatcgtgaat
gcaactaaagaggaggaagccgcagaggacaccaaaagtaagctgtatcgacctgctaca
aagtttgtccccgtgtcccagcatgtctcaccagtatcatccagtgaaagcaagaagtct
gcatttaaaagaaagacagaagaaaagaagaagagtaatcttgaactcttcaaagaagaa
cttaaactaatacaagaagagcgagaagaaagatataaaaagaagaaaaatgactctggt
ggtggtggaggatttggagatcttgacacaccattatcaggacggtcatcattatatgat
gacctaacagtgccaaccaccactaacctctacattagctgcattagcccaaagatgaac
gaggagattctctgcaaagagtttggtaagtatggtcccctagccagtgtgaagattatg
tggccccgaacagacgaggagcgctgcaggacctccaacagagcctttgtggctttcatg
acacggaaagatgcagagagagccttggcttcacttgatggtaaagtgattatggggttg
gaaatgaagctggggtggggtaaaccagctcgcattccacctcagcctctctacacaccg
gtgggggtgagggccacaccgccacccccatcgggtctgcctttcaatgctcagccaagg
gatcgcttccgcaatgacttcaccaagccgctgggcatgtccaaaggagagcttgacaag
actctgtccgaagccgtagtcaaagtggttatcccgaccgaaaggaatctattattcctc
attcacaggatgatagagtttgtggtgcgtgaaggccctgtgtttgaagccataattatg
aacaaggagaaaagcaatccagactacaagttcctttttgacaacaaaagccaagatcat
gtatactatcgctggaaactgttctccatcctccagggacagtccccaacggagtggagg
accgcagattttcgtatgttccggggaggctccatgtggagaccccctatcataaacaac
tactcccagagaggggaagatagggaagaggtggtggaggaggatgcttcccctgaggaa
gagttgaagaaagggcagctccgagctgagcacagacagaggctagagactttgctcaaa
gagctcacgccgggcagagaagatattggcaatgccatgctgttctgtcttcagcgagca
gatgcagcagaggaagtagtgggacacatcacggaatctttttccctgcttcagacgccc
cttcagaagaagattgccagattgtaccttgtgtcagacatattgcacaactcgtgtgcc
aaagtggccagtgcatcctattatcgtaaatattttgaaacaaagctaacacagatattt
ggagaccttaatgcggcgcataaaaacatacaagccaggctgcaggcagaacagtttaag
caaaaggtcatgagttgttttagagcatgggaggactgggccatatacccggagccttat
ctaatccaccttcaaaacatctttctgggcttcgcaaaagcagtggaggaatccacagag
aaagtaaaggaagcccccttctgtgtggatggtgcgccaatggacaggccacccatcgat
gggttacctttacacagagctcctgtggatgaccttgatggctgccccttaggctgggac
cctctagatggagtccctgttgatgacatagacggtgttcccttaggagttgctattgac
gacattgatggaatgcccttggaggagagtaacgttcctctctccagagtgcctttatcc
aagtgggagacgacgggtgatgctgggatattttctcaagccaaaactgagtccaagtgg
gacatggtggtggagcataacagtgacgataaagtgaatgtaagtgtcaactcgcaggat
ggagttgaagactcagacagcgacagtagtgaggactctggcagttcgtcagacttccag
agctccctcacaagttttcagatgtctgagagcaagaggaaaaggttgagagagctggag
gtaaaggttatgaagattcaagatgagttggaatctggcaagaggccgaggaagactgga
atgagcatacaacaacaagtggagcactacaggaacaaactgcaagagaaggagtttaaa
aaagatgaagaaaagaatgagagatcgacatcaaagtctaaagacaagtcaaaggaggac
agaagggacaaagataagagcaaaagaagtgaagacggggccagaagacgaggatggagt
aaagatcccgatgaccagacccgaaaatcgagaagcatctctcctttaaagacaaggtct
cccaaatggtcgaagcgttcccgatccccgtctccagaccggaaggcggggaagtctagg
tcacggtcgccgcatcgctcccacaagaaggcaaaaaagagcaaacactga
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