Etheostoma cragini (Arkansas darter): 117956325
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Entry
117956325 CDS
T07493
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117956325 (snx13)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117956325 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
117956325
NCBI-ProteinID:
XP_034747207
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Position
14:complement(11284662..11310755)
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AA seq
979 aa
AA seq
DB search
MSNIPQQRISSTSQQTQASLSIWGWGGLGVVLFLVTFGPFAVFYLAFYIFCFIGGGFAVT
LLYGKINSEKHLEKCEQSYLPPTQIGILKTLDEMKLEMKPIKIDRRLTGSSFIDEPLQQV
IQFALRDYIQYWYYTLSEDESFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFAT
HLRVFRKAQDRLAEREDKQRDITEELVDSFFEAEVEMERKICRDVVCTSHKDEEGFLRDL
CELLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNY
EAFMNILKLTDKPPELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETR
IQRLHSGKEVDALKLAANFGKLCVIPLDHILIHNIALQFFMDFMQAAGAQAELFFWLTVE
GYRVTAQQQLEAMQGWQKDGKKQPCATKGLLKAAALGVYEQYLSDKASPRVQVDEASVTT
LGEKIQKDDPTPEIFDEIQRNVYDMMLRDERYYPSFKQSPLYVRMLAELDMLKEPSYRGS
DDGDGESFNGSPTGSINISLDDLSNSCHDESMHLHAFISDTADACLPGFWGAAGVCNDHG
KTYALYAITVFRRNHDGSEDCWKTYRRYSDFHDFHMRITEQFENLTSILKLPGKKTFNNM
DRDFLEKRKKDLNAYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVN
PLRSSMRNVSNAVKGLPDSLAEGMTKVSDNMGRMSERLGQDIKQSILKVPPLLPKSDIDP
EHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTIN
RKIVDHVDYLTSPEQVADYVKKFRDSYWPNGILAETAPRRDKSIRMRTRIAAKTSLLGIM
PDELKHIIGADTTRKGILRVFDMFQYQPTNRRLVYVFLEGFLETMFPQYKFPELFVKLHS
RSPRIHRYSQKLKSSSLKR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacatccctcaacaacgaatttcttccacatcacaacaaacacaggccagtctg
tccatctggggatgggggggtcttggagtcgtgctgtttctcgtcacctttggacccttt
gccgtgttctacctggccttttatatcttctgcttcattggagggggctttgcggtcact
ctgctatatggaaagatcaactcagagaaacacctggaaaagtgcgagcagtcttacttg
ccacccacacaaattggtatactaaagacattggatgagatgaagctggagatgaagccc
ataaagattgacaggagactgactggctccagtttcatagatgaaccactacaacaggtg
atccagtttgctctgagagattatatccagtactggtactacactctgagcgaggatgag
tccttcttattggagatcagacagacgctgcagaatgccctcgtccaattttctacacgg
tccaaagaggtggactggcagccttactttaccactcgcctggtggacgactttgccacc
catttacgtgtctttagaaaagcccaggatcgcctcgctgaaagagaggataagcaaagg
gacataacagaggagctggtggactccttctttgaggctgaggtggaaatggaaaggaag
atttgtcgagacgtagtgtgcacttcacacaaagatgaagaaggttttcttcgggacttg
tgtgaattgcttctgtatctgttactacctcctggagatttccataacaagaacatgaga
tacttcctaagggaggtgctggcgcgtggtgtgctacttcctctgatcaaccagcttagc
gacccagattacatcaaccagtttgtcatctggatgatacgggactccagctgtaactat
gaagccttcatgaacatcctgaagctgacagataagcctcctgagctagaagcggtcaag
gacaaggtgctagaagagctgcagtacctccgctctctggacaccgcaggagatgacatc
aatgtgattaagaaccagattaacagtcttctgtttgtgaagaaggtgtgtgagaccagg
atccagagacttcactctggcaaggaggtggatgccttgaagttggctgccaactttgga
aagctgtgtgttatcccactggatcacatccttatccacaacattgccctgcagttcttc
atggatttcatgcaggcagcaggggctcaggcagagctgttcttctggctcacagtggag
ggctacagggtgacggcacagcagcaactggaggccatgcagggctggcagaaagatggc
aaaaagcagccctgcgccaccaaggggctgctaaaggctgctgcactgggtgtctacgaa
caatacctctcggacaaggcgtctcccagggtgcaggtggacgaggcatccgtaacaaca
ctaggggaaaagatacagaaagacgaccccacaccagagatatttgatgaaatccagaga
aatgtgtatgacatgatgctacgtgatgagcgctactacccctcattcaagcaaagtccc
ctttacgtccgcatgctagcagagctggacatgttgaaagagccgagctatcgggggtct
gatgacggtgatggagagtccttcaatggctctcccacaggaagcataaacatatctttg
gatgacttgtcaaactcctgccatgatgaatctatgcacctacatgctttcatctccgac
acagctgacgcttgtctccccggcttttggggtgctgcaggggtttgcaatgaccacggt
aagacctacgcgctgtacgccatcactgtgttcagacgcaaccatgacggcagtgaggac
tgctggaagacctaccgtcgctactcagacttccacgacttccatatgaggatcactgaa
cagtttgaaaacctgacgtcgatccttaagctgccagggaagaagacattcaacaacatg
gacagagacttcttggagaagagaaaaaaagacctcaatgcttacctacagttgctgctc
aacccagaaatggtgaaggcctgtccaactctgattccttatgtctatgacttcctagag
aacaaggcctacagcaagggcaagggggaatttgcacgcaagattgacacatttgtaaat
cctctgaggagttccatgagaaacgtgtccaacgcggtgaagggcctgccagatagtctg
gctgagggcatgaccaaggtgtctgataacatgggacgcatgtcagaaagactgggtcag
gacatcaaacagtccatactcaaggttccaccactcctccccaagtctgacattgaccct
gaacactgtcgagtctctgctcagcttgatgacaacgtggatgataacatcccgctgagg
gtaatgctgctactaatggacgaagtgtttgaccttaaggaaaaaaaccagtggttgcgc
aggaacattaagaacctactgcagcagctcatcagggccacgtatggagacaccatcaac
aggaaaattgtggatcatgtggactacttgacctcacctgaacaggttgcagactacgtc
aagaagttcagggattcctactggcccaacggtattctggctgagacggcgccccgtcgt
gacaagagcatccgcatgagaacacgaatagctgccaagaccagtctgctgggcatcatg
ccagacgagctgaagcacatcatcggagcggacaccacaagaaagggcatactccgcgtc
ttcgacatgtttcagtaccaacccacgaaccgtcggctagtctacgttttcctggagggc
ttcttggagacgatgttcccccagtacaaattccccgagctctttgttaagctgcactcc
cgctcaccacgcatccacagatatagccagaaactcaaatcctcctctctcaagaggtga
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