Etheostoma cragini (Arkansas darter): 117956379
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Entry
117956379 CDS
T07493
Symbol
gatad2b
Name
(RefSeq) transcriptional repressor p66-beta isoform X1
KO
K23194
transcriptional repressor p66
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117956379 (gatad2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117956379 (gatad2b)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117956379 (gatad2b)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117956379 (gatad2b)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
117956379 (gatad2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
HscB_4_cys
FAM76
Motif
Other DBs
NCBI-GeneID:
117956379
NCBI-ProteinID:
XP_034747307
LinkDB
All DBs
Position
14:complement(4275926..4333082)
Genome browser
AA seq
716 aa
AA seq
DB search
MERMSEEALRLNLLKRGLESPSEREEALAKRLKMEGHEAMERLKMLALLKRKDLADLAAL
EVAGPLGDGKGPGASSLHHQSLMGAAYEEKLNGSLRLGGHGSHIGPSKNGKENIMDEPVD
MSAGRRCDADHDRRTPSPDVIILSDNEASSPRTTPRPEERLHQANLDMFKGKTGEERQQM
IKALREELRLEEARLVLLKKLRQSQMQKENVVQKVPVVQNAASSVQPPPIHNSPGLGKLP
VRPGLHNPEPQNLRNAQGHTVIRSAANASLPPMLMSQRVIAPNPSQLQGQRVSSKTGMSR
SSSSSMANAVSYQQVHVLKQQRCMGLTNQQQSSLQTPPRKFLYFQKVLPHEPDVDWAKNW
PWHFGPDRPTTIDHTNASQQVAASQRSGSSAMYMNLAHMQAAGAGGVAGGLGGASAVSPS
TMSSSAGGGVSSMADQASSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAANSEFI
YMVGLEEVVQSVLDSQGKLRGPLGRMEPFFCAQCRTDFTPHWKQEKSGRILCEQCMTSNQ
KKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSPSSAPTGPNASKTDSMIRHHALR
QAPQPQASLQRGLSNSARGVLSNFAQASQLSVASSLMGMTSAKHCGSGGSSSSSSSNRLQ
HDSRRQIYNIPGLNIAYLNPAAVGAHKSSSLADRQREYLLDMIPPRSISQSITGQK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatgtctgaggaggcgctaaggctcaacctgctaaagcgaggcctggagtca
cccagcgagcgagaggaggcgctggccaagcgccttaaaatggagggccacgaggccatg
gagcgcctgaagatgctggcgcttcttaaacgcaaggacctagctgacctggcagccctt
gaggttgcagggcccctgggagacggaaagggtcccggagccagcagcctccaccaccag
agcctaatgggggctgcttatgaggagaaactgaatgggagtctgaggctgggaggccac
ggcagccatattggacccagtaagaatgggaaggaaaacatcatggatgagccggtggat
atgagcgctgggagaagatgtgatgcggaccatgacagacgaactccgtctccagatgtt
atcatcctgtcagacaacgaggcatccagtcccagaacaactcctcgccctgaggaacgc
ctgcaccaggccaacctggacatgtttaaggggaagacgggagaagagaggcagcagatg
atcaaagctctgagagaggagctgcgtctggaggaggcgcggctggtcctgctcaagaag
cttcgacagagtcagatgcagaaggagaatgtggtgcagaaggtccccgtggttcagaac
gctgcatcctctgtgcagcctcctcctatccacaactctcctggcctgggcaagctgcct
gttaggccgggcctgcacaaccctgagccccagaacctacgcaatgcacagggtcataca
gtcatcaggtcagcagccaatgccagcctgccccccatgcttatgtcacagcgagtaata
gcccctaatccttcccagctgcagggccagagggtttcctctaagactgggatgtctcgc
tccagctccagcagcatggccaatgccgtgagctaccagcaggtacatgtgttgaagcag
cagcgctgtatgggtttgaccaatcagcaacagtcatccctgcaaaccccaccccgaaaa
ttcctgtattttcagaaagtactaccccacgagccagacgtggactgggccaaaaattgg
ccctggcattttggcccagaccggccaaccacaatcgatcacacaaatgccagccagcag
gtggcagcttcccagcgctcaggttcgagtgccatgtacatgaacctggcccacatgcaa
gcagcaggggccggtggggtggcaggtggactgggcggagcttcggctgtcagcccgtcc
accatgtccagctcggctggcggaggggtgagctccatggccgaccaggccagcagccag
gcggcggctaagctggccctgagaaagcagctggagaaaaccctgctggagatccctcca
cccaaaccccccgccccactcctccactttctgccctctgccgccaacagcgagttcatc
tacatggtgggcctggaggaggtggttcagagtgtgctcgacagtcagggtaaactcaga
gggccgctgggccgcatggagcctttcttttgcgcccaatgcagaaccgacttcaccccc
cactggaagcaagagaagagcgggcgaattctctgtgagcaatgcatgacttccaatcag
aagaaagctctgaaggcagagcacaccaacaggctgaagaacgcctttgtgaaggccctg
cagcaggagcaggagattgaacagaggctgcagcagcaggcggccctctcccccagctcg
gccccaaccggcccaaacgcctccaagactgactccatgatccgacatcatgcactccgt
caggctccccagcctcaggcctccctgcagcgaggtctgtccaactcagcgcgaggtgtc
ctgtccaactttgcccaggcctcccagctgtcagtggccagcagcctcatgggaatgact
agtgccaagcactgtggcagcggtggaagcagcagcagcagtagcagcaatagactgcaa
catgacagccgtcgccagatctacaacatcccagggttaaatattgcctatctgaaccca
gcggcagttggagcccataagagctccagcttagcagaccggcagagagagtacctgttg
gacatgattccgcctcgatccatatcgcagtccatcaccggacagaaatga
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integrated database retrieval system
