Etheostoma cragini (Arkansas darter): 117956537
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Entry
117956537 CDS
T07493
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
ecra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117956537 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117956537 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117956537 (nup153)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117956537 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
117956537
NCBI-ProteinID:
XP_034747511
LinkDB
All DBs
Position
14:complement(13410632..13428262)
Genome browser
AA seq
1513 aa
AA seq
DB search
MTAIRRRRNTDRHSDEKAMAATGGGKIRSRRYHIASKPYAKSKQQQSGLISRVTDTVKSI
VPSWLQKYFKNEDVPEGEGAVLGTELNCQPPPPPNGSEEGPLPLDGRDSPEPSTSNTEPS
TSRASLNFQEYVLSRPPLSRSHLHFPPLDASSPTLGAASSLFSHPSTSLAPGPFSTGFSL
VKEIKDNLSQHEDDNISTTSGFSSRASDKDVPASKTASLPQLWSPETDRTQSGPQHAQSS
MKRPAFNLSVFGTSSNSSLNSTVLNSSQLGDSPFYPGKTMYGGAAAVRSARARPGTPYQA
PVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADARRIPAAAASSPLSASMDGTN
LDVSPFQSKKKRMDTTLPPVQSLVVPAAVSVSGNRSVSFRPTLTPGGVSRTLDRTPKDTP
KRQSPQLPEATPGPSRSTMGSSIPAYPLSSTPAASSVSSGGGKMKRERTTTRPSSKHPEE
EEVCEVLDLPTISLPISTSALPTFSFSSPLPPLPTSTTISTAPNLTPVTPAKETVTNKEP
TTTLTPLSAPYTFSSPIVKATAASPPSFSPSAGFTFSAPVAKLAPSMSNGKLASPIVAAV
KSVASKITEDFEGPFKPAKTLKQGSVLDLLKAPGFASPVRTSPGPDNTLVQIFPQSTAHS
STTSTTTSHSSTVFGDAFKAPPGWSCDVCMVQNKPSDTKCVCCTAPQPNFSSCKSMDNEP
SATTSVGFESSSSMNTTSATTTTAGFGTIFSKPAGTWDCDTCLVLNKPEAVKCVACETAK
PGTGLKPSLTLPSAFSAVKTVSTPTAPLSTGFIGFGDKFKKPEGAWECDTCLVENKAVDT
KCVACMSAKPGASAASSSACSAPVFGLGDAFKKPEGAWDCDVCLVQNKAVDVRCVACQAA
KPGASVVPKAFGSSLVSSAGGTSGSSSGGFKFGTSDSTSGSGLKFGGSLTESSSTGGFKF
GVPFGSSSSETTSKDTTASSGFKFGISSGGFKFGAASSDDKKSDKPATGSGFKFGASGGI
AFGTGSSSSENNSPKGGFTFGLSKPEEKTSNTTSSSVSVTLPASSQEKSDNALSSNDPTS
TNSSTTTTTSTTTGSVFGRLGERSLAATTPQGGSTFGSLQADKESAAPTFTFGKPEEKKE
ATASSAPSAFLFGAANKDGDAAPAASGGFSFSKPSAPAEQPPPAYNFGKPADKSEQSTAV
APKPSFPFGQSATDSSAAPKSAFSFMASNPTNNVNSTTSSSTTLTPSLFGGSSSSQAPVP
SAAPSNFMFGQPATTASDAPPAIAFVFGQSQDSQPAAPSAAPLNSTPAPSQPFLFGAPAS
AAAAAAPPAAAPSFGFGATAAPAAAASSSAPSAAPSPFAFSSASSGGFGANQAPSFGSSF
GSPFTATPSQPPAFGAKPNAAPVFGQQTNSTSVFGAAANSAPGGGFQFGGASAFGATNNA
SGGVFTFGGGSAASPAPPANPSIAAQSGQPGGGFNFSQPPAFNMGSAKSFTASPAGQQAI
AGRKIKTAVRRRK
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcggcgccgaaacaccgatagacactcagacgaaaaagccatggcg
gccacgggtggagggaaaattagaagcaggagatatcacatcgcctctaaaccttacgcc
aagagtaaacagcagcagtcaggcctcatcagtcgagtgacggacacagtaaagagcatc
gttccttcctggctgcagaaatacttcaagaatgaagatgttcctgaaggagaaggggct
gttctggggacagagctgaactgccagccaccacctcctcctaatggcagcgaagaggga
cctcttcccctcgatggacgcgactccccagagccaagcaccagtaacacagagccctca
accagccgggcatccctgaactttcaggagtatgtgctatctcgacctcctctgagtcgt
tctcacctccactttcctccgctggatgcctcctccccgaccctgggggccgccagcagc
ctcttctcgcatccatccacatccttagcccctggacccttttcgacaggcttctctttg
gtcaaagaaatcaaagataacctctctcagcacgaagatgataacatctccaccactagc
ggcttttcctcccgtgcctcagacaaagatgtccctgcttccaaaacggcatcacttccc
caactttggtccccagagacggacagaacacagtctgggcctcaacatgcccagtccagt
atgaaaaggcctgctttcaacctgtctgtatttggaacttcctccaattcatcattaaac
agcacagtgctaaactctagccagcttggagattcacccttctaccccgggaagaccatg
tatgggggagcagctgcggtcagaagcgctcgtgctcgtcctggaacaccgtaccaggcc
ccagtaaggagacagatcaaggccaaacctgctggtgctcagccctgtggggtgacgagt
gccacagcccgacgcatccttcagtccttggagcgcatgtcaagcccactggctgatgcc
aggagaatcccagcagcagctgcctcctcccccctgtcagcgtcaatggatggcacaaat
ctagatgtttcccctttccagtcgaaaaaaaaacgtatggataccacccttccaccggtg
cagagtctggtggttcctgctgcagtatcggtctcaggaaaccgctctgtctccttcagg
ccaacgttgactcctggaggagtgagccgaactctagacagaaccccgaaagacacgccc
aaaagacaatcaccgcaactacctgaagcaaccccaggtccatctcgaagcacaatgggt
tccagtatccccgcatatcctctgtccagcacgcctgcagccagcagcgtgagctctgga
gggggcaagatgaagagagagaggaccacaacacggccttcctctaaacaccctgaagag
gaggaggtgtgtgaggtactggacctaccaactatttcacttcccatcagcacctctgcc
ctgcccaccttcagcttctcctcccctcttccacctctccccacctccaccaccatcagc
acagcccccaatctcacacctgtgactcccgctaaggaaacagtcacaaataaggagcca
acaacgacattgacacccctctctgcaccgtatacattttcctcccctattgtcaaagca
actgctgctagtcctccttccttttccccctcagctgggttcacgtttagtgcacccgta
gcaaagttagctccctccatgtcaaacgggaagttggcctctcccatagtggctgcagtg
aagtcagtagctagcaaaatcacagaagattttgaaggacccttcaaaccagccaagacc
ctgaagcagggcagtgtgctggatcttctcaaagcacctggctttgcctctcctgttcgg
acttcccccggaccagacaacactctcgtgcagatcttcccacaatccacagcccactcc
tcaaccacttcaaccaccacctcccactcttcaacagtgtttggggatgcattcaaagcc
ccgccaggctggagctgtgacgtctgcatggtgcagaacaagccatcagataccaagtgt
gtttgctgtacagccccacagcccaacttctcctcttgcaaatctatggacaatgaacct
tcagccaccacctcggttgggtttgagagcagcagcagcatgaacaccacctccgccact
acaaccactgcaggttttggcacaatattctccaaacctgcaggaacttgggactgtgac
acatgtctcgtcctaaacaaacccgaagcagtaaagtgtgtggcctgcgaaacggccaaa
ccagggacagggcttaaaccctcactgactcttccttctgccttctcagctgttaagact
gtatccacacccacagcccccctttctacagggttcattggatttggagacaaattcaaa
aaacctgagggtgcatgggaatgtgatacatgtttggtagaaaacaaggcagtggacaca
aagtgtgtggcctgcatgagtgctaaaccaggagcttcagctgcatcctcttcagcctgc
agtgctccagtgtttggattgggagatgcattcaagaagccagagggcgcctgggattgt
gatgtctgtcttgtacagaataaggctgttgatgtacggtgtgttgcctgtcaggcagcc
aaacctggagctagcgtggtgcccaaagcttttggttcgtctttggtttcatcagctggt
gggacttcaggttctagttctggaggttttaagttcggcacatcagacagtacgtctgga
tctggtttgaagtttggaggctcattgacagagtcctcatcgacagggggattcaaattt
ggagtcccatttggaagctcctcctcagaaacgacttctaaagacactactgcctcatca
gggttcaaatttggcatctcatctgggggctttaaatttggggctgcctctagtgatgac
aaaaagtcagacaaacctgccacaggttcagggtttaagtttggagccagcggtgggata
gcgtttggaactggatcgtctagctcagaaaataactctcctaagggtggcttcactttt
ggactgtcaaaaccggaagagaaaacatcaaacaccacttcatcctctgttagtgtcact
cttccggcttcctctcaagagaaaagtgacaatgcattatcatcaaatgaccccacatcc
accaactcctccaccaccactaccacatctaccaccactggctctgtatttgggagattg
ggcgagcgaagtttggcggccacaacaccgcaaggtggctctacgtttggatccttgcag
gctgacaaagagtcagctgctcccacatttacctttgggaagcccgaggaaaagaaggaa
gccactgcctcctcggctccatctgccttcctctttggtgctgctaataaagatggagat
gctgcaccagccgcgtcaggaggcttttccttcagcaagcccagtgccccagcagaacaa
cctccccctgcctataattttggcaagccagcagacaagagtgaacagtctaccgctgtg
gccccgaagccctcttttccctttggacaaagtgctacagattcttctgctgctcctaaa
tccgcattttccttcatggctagtaatcccaccaacaacgtcaactccaccacctcgtca
tcaaccaccctgacacccagtctgtttggtggcagcagctccagtcaggctcctgttcct
tctgcagctcctagcaatttcatgtttggtcagcccgctacaaccgcaagtgatgctcct
ccagctatagcctttgtcttcggccagagtcaggacagccagccggctgccccgtcagca
gctcctctgaactctactccagccccatctcagccctttctcttcggtgctcctgccagt
gctgctgctgctgctgctcctccagctgctgctccatcctttggctttggagccacagca
gcccctgctgccgctgcctcctcttcagctccatctgcagctccctctccatttgcattc
agctcggcctcctctggtggattcggggccaaccaggctccttcattcggttcatctttt
ggatcccccttcacagcaacaccttcccagcccccagcgttcggagccaaacccaatgcc
gcccctgtctttggacagcaaaccaactccacatctgtcttcggggcagctgctaattct
gcaccaggtggaggctttcagtttggaggagccagtgcatttggagccacaaacaacgcc
tcaggaggagtgtttacttttggagggggatcagcagcttctcctgcccccccagccaac
ccctccattgcagcccagtcaggacagcctggaggtggattcaacttttcacaacccccc
gcattcaatatggggtcagcaaagtccttcaccgcttctcctgctggacagcaagcgatt
gctgggcgaaagatcaagactgcggtgcgacgcagaaagtag
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integrated database retrieval system
