Etheostoma cragini (Arkansas darter): 117956577
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Entry
117956577 CDS
T07493
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117956577 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecra01007
]
117956577 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117956577 (vars2)
Enzymes [BR:
ecra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
117956577 (vars2)
Amino acid related enzymes [BR:
ecra01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117956577 (vars2)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117956577 (vars2)
Prokaryotic type
117956577 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
117956577
NCBI-ProteinID:
XP_034747584
LinkDB
All DBs
Position
14:complement(8274364..8321674)
Genome browser
AA seq
1082 aa
AA seq
DB search
MWRAGRALSCRLPGEGVARLCSGIPHKPPSSSQSNSSPRTKAEKLRRRREREEAILSSQH
STAEDKAVKWTQKQKIVYTAPTPAGTKKDTSLLFPSSYSPEYVESSWYQWWEKEGFFGPE
QHERLSHSVDQTFSLCIPPPNVTGTLHLGHALTVAVEDVLVRRKRMQGYRVLWLPGCDHA
GIATQTVVERRLLKERGKHRQDFTRQEFLHEVWKWKNERGEEIYQQLRALGASLDWSRAC
FTMDPGFSRAVTEAFVRLCDSGLIYRSEALVNWSCALESAISDIEVDSKELSGQTLLSVP
GYENKVEFGTMLTFAYPIEGHEGEVAVSTTRPETMLGDVAVAVHPDDPRYQAVHGKQCRH
PFTNRLLPIIADSMVDMELGTGAVKVTPAHDHTDFLLSQRHSLPQFTVIGGDGTMTPSCG
QWLQGVKRFDARQLVVDALVEKKLFRGRKDHAMTLPICSRSGDIIEPLLKKQWFLRCDEM
AKKAIQAVEEGQLEIIPQYYTKTWKNWLSNTSDWCISRQLWWGHQIPAYRVELPNSADKQ
EEHWVWGQSEDEARQRAAVRYGVKPEDVTLTQDPDVLDTWFSSGLFPFAMLGWPEQTSDL
KRFYPNSILETGSDLIFFWVARMVMLGTELTGQLPFKQVLLHSLVRDKHGRKMSKSLGNV
IDPLDVIHGVSLERLQEKVKEGNLDPREQLVAMEAQRKDFPTGIPQCGTDALRFALCSHK
TQGEDISLSISQVLSCRHFCNKMWQALRFTLGVLGANTTPVTTLEETCAVSSMERWICSR
LYSTVVQCEQAFEVYELHTVTSALYSFWVHSLCDVYMECVKPVLIQRQDGGAVVQTNTEP
SVTARQVASSVLYHCVSMSLALLSPFMPFITEELWQRLQPHGPGAAAPPSALCLQPYPCS
SQLAHWHFPEEERDFLLVQEVIRVARSLRSHCGMTKEKPAMWAVCSPGQAQILLHFGSAV
RTLGRISSLHVHCPQRADLFSVHSTPPPKGSLIGVVDHTCQLHLHIQSGMNIENQMVQLS
QRRDKLIPKLEKLLCRVQSPDYLTKVPAHVRQQMDTKMAALQQELESVEEQLKVLQKIQT
SP
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtggagggcaggtcgtgctctgagttgcaggctgccaggagaaggagtagctagactt
tgttccggcatcccgcacaaacctccctcctcttcccagtccaactcttctccccggacc
aaagcagagaaactgaggcgtagacgagagcgggaggaggccatactgtcaagtcaacac
agtactgctgaagataaagctgtgaaatggacccagaagcagaagatagtgtacactgct
ccaacccctgctgggacaaagaaagacaccagtttgctgttcccttcctcatatagtcca
gagtatgtggagtccagctggtaccagtggtgggagaaagagggtttcttcggtccagag
caacatgagagattatctcactctgtggaccagaccttctccctgtgtatccctccgccc
aatgtgacgggcacgctgcacctgggacacgctctcactgtggctgtggaagacgtgctg
gttcggaggaaaaggatgcagggctaccgagtgctgtggctgcctggatgcgaccatgca
gggatcgcaacacagacggtggtggagcggaggctgctgaaagaaagagggaagcacaga
caggactttaccaggcaggagtttctacatgaggtctggaaatggaagaatgagagaggg
gaggagatctaccagcagctgagggcattgggagcctctcttgactggagccgagcctgc
ttcaccatggatccaggcttcagcagggcggtgacggaggcctttgtaaggctgtgtgac
tcggggctgatttatcgctcggaggcgttggtcaactggagctgtgctttggaatctgcc
atctccgacattgaggttgactcaaaggagctgtctgggcagaccctgttatctgttcct
ggttatgaaaacaaggtggagtttgggaccatgcttacctttgcataccctatagaaggc
cacgaaggcgaggtggcagtatccactacccgtcctgagactatgctgggagatgtagct
gtagctgtccaccctgatgaccctcgctatcaggctgttcatgggaagcaatgcagacac
cccttcaccaacagactcctgcccatcatcgctgactccatggtggacatggagctagga
actggtgcagtgaaggtaacccccgctcatgaccacactgacttcctgctgtcacagaga
cactcactgccacagtttactgtgattggaggagatgggaccatgacgccctcctgtgga
cagtggctgcagggagtgaagcgttttgatgcccgacagcttgttgtggatgctctggtt
gagaagaagctgttcagaggaaggaaggatcacgccatgactttacccatttgcagccgc
tcaggagacatcattgagcccctcctgaagaagcagtggttccttcgctgtgatgaaatg
gctaaaaaagctatacaggctgtggaggaaggacagctggaaattatccctcagtattac
accaagacgtggaagaactggctgtccaacaccagtgattggtgcatttccaggcagctt
tggtggggtcatcagatccctgcgtaccgagtggagcttcctaattctgctgacaaacaa
gaggagcactgggtatggggacaaagcgaggacgaggcccgacaaagagctgctgtcaga
tatggagtgaagccagaagacgtcactttgacccaggaccctgatgtgctggatacgtgg
ttctcctctgggctgtttcccttcgccatgcttggctggccggagcagaccagtgacctg
aagcgcttctaccccaattccattctggagacgggcagtgacctcatcttcttttgggtg
gcgaggatggtgatgctgggcacagagctgactggacagctgccctttaaacaggtcctc
cttcactctctggtgagagataaacatggcaggaaaatgagtaaatctctggggaatgtt
atcgacccgctagatgttatacatggagtctctctggagagactccaagagaaagtaaag
gaggggaacctggaccccagggagcagctggttgccatggaagcgcagaggaaggacttc
cccacagggatccctcagtgtgggaccgatgcgctgagatttgccctttgctctcacaag
acgcagggagaagacatcagtctgtccatctctcaggtcctgagctgcagacacttctgt
aacaagatgtggcaggcactgagattcacactgggagtactgggtgctaacacaacccca
gtgacaacactggaagagacgtgtgcagtgagcagcatggagcgctggatctgctccaga
ctctacagcactgtggttcagtgtgagcaagccttcgaggtctacgagctgcacacggtc
acatccgcgctgtactccttctgggtccacagcctgtgtgatgtctacatggagtgtgtg
aagccggtgctgatccagcggcaggatgggggggccgtggtccagacgaacacagagccc
agtgttacagctaggcaggtcgccagtagtgtcctctaccactgcgtgtccatgtctctg
gccctgctctctcctttcatgcccttcatcactgaggagctgtggcagagactccagcca
cacggacctggagctgctgcccccccgagcgctctgtgtttacagccttacccttgctcc
tctcagctggcacactggcatttccctgaggaggaaagagatttcctgttggtgcaggaa
gtcatccgagtggcccgctcactacgatcccattgtggcatgaccaaagaaaaacctgcc
atgtgggcagtgtgttcacccggccaggcccagatcctgctgcactttggctcagctgtt
aggactttaggacggatctccagtctccatgtccactgtcctcagagagcagacctcttc
tctgtccactccactcctccacccaaaggaagcctcattggtgtggtggaccacacgtgt
cagctacaccttcacattcagagtggaatgaacattgaaaaccagatggtgcagctctcc
cagcgcagagacaagctgattccaaagctggagaagctcctgtgcagagtgcagtcccca
gactacctaaccaaggttcctgctcatgtcaggcagcagatggacactaagatggcggct
ctgcagcaggagctggagagcgtggaggagcagctaaaggtcctgcagaagattcaaact
tcaccataa
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