Etheostoma cragini (Arkansas darter): 117956668
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Entry
117956668 CDS
T07493
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117956668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117956668
03021 Transcription machinery [BR:
ecra03021
]
117956668
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117956668
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117956668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
117956668
NCBI-ProteinID:
XP_034747753
LinkDB
All DBs
Position
14:complement(21043748..21111489)
Genome browser
AA seq
795 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSSLAPRSSPDIRMSKAAEEEKPGAEYPGDSSDSDRN
SPDDQVEPMKTSPFSVSPGPAGSKGKSEQSAEMTHSTVPPATPSQQLQQQQQQLQQQQQQ
LQQQLQQQLQQQQQQQQQQQQQQQQQQQQQQQQHHHTQLMLAGSQLAGLAALLPAQQQLL
LQQAQAQLLAAAVQQSNAAHAAHAAHAAAQHQANQQHQQQQQQNQSQSHQQQQQHQTKQE
QNVPPPTQLALSQPIQLTAQDIQQLLQLQQLVLMPGHHLQSPAQFLLSQPAQAQQPQQGL
LSTQNLIQLPQQSPGGLLTTPPRLGLQAQREKNSDVVVVGSSGGGGGGGGSVASGGGVVT
SVGATSASSSTIASSLASGLTPGAHGGHMGEEPSDLEELEQFARTFKQRRIKLGFTQGDV
GVAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAVDSMLPSPSSLS
SPMLGIEGLSGRRRKKRTSIETNVRVALERNFHMNQKPTSEEILLMAEQLNMEKEVIRVW
FCNRRQKEKRINPSSSTTPPLPSQTSPVVTHKAPCYSPHMISSHGLSQVTTCLSTTAASS
SPSCPMTPVSSAAVGSTSSSVTPPPHSTASPAPPNLGAHGLNTGNTMMGVSTGINQALIG
SNPLATMQALAASSGQLPISSLEGGAAHLLLGGPGGPAIPPSLRPSLFLNRSTLLPMVTC
SMATASTPTMGLVSGGGGGIGGPRLSFSQSPPPGASNLMSPTSCPEESASPCSSPASFCS
FSEASPPPLGGAMAE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtccccttcgtctttcagagaacagcgtccgacttcagcgcc
tggagactcaagtcctcgctggctccgcggtccagccccgatatcaggatgtctaaagca
gcagaggaggagaagcctggggctgagtatccaggggacagttcagactctgacagaaac
agccccgatgaccaggttgagccaatgaaaacaagccccttcagcgtctctcccggaccg
gctggcagcaagggaaagagcgagcagagcgctgagatgacacatagcaccgttcctcct
gcaactccctcccagcagctacaacaacaacaacaacagctacaacaacaacaacaacag
ctacaacaacagctacaacaacagctacaacaacagcaacagcagcagcagcagcaacag
caacagcagcagcagcagcaacagcaacaacaacaacaacaccaccacacacagctgatg
ctggctggcagtcagctagcagggcttgctgctctcctcccggcccagcagcagctgctc
ctccaacaggcccaggctcagctcctggcggccgctgttcagcagtcgaacgccgcccat
gccgcgcatgctgcccacgcagccgcgcagcatcaagccaaccagcaacaccagcagcag
cagcagcagaaccaatcacaatcccatcagcaacagcagcaacatcaaaccaaacaggaa
caaaatgtcccgcctccaacgcagctggccctgtcgcagccaatccagctcacagcccag
gacatccagcagctgttgcagctccagcagctggttttgatgccgggccatcatctccag
tctcctgcccagttcctcctgtcccagccagcacaggcacagcagccgcagcagggtttg
ctctcgacacaaaatctgattcagctacctcaacaaagcccagggggactactgacaacc
ccacctcgcctgggactccaagcacagagggagaagaacagcgacgttgtggttgttgga
agcagcggtggcggtggcggcggcggcggctccgttgctagcggtggcggtgttgtgacg
tctgtgggagccacctcagcgtccagcagcaccattgcttcctcattggcgtccggcttg
actcccggagctcatgggggtcacatgggggaagaacccagcgacctggaggaactggag
cagtttgcccgaacctttaaacagcgccgcatcaagctgggattcacccagggagacgtc
ggcgttgctatgggaaaactgtatggcaacgacttcagccagaccaccatctctcgattt
gaagccctcaacttgagctttaagaacatgtgcaagctgaaaccactgcttgagaagtgg
ctgagtgatgcagaaaccatggcggtagacagcatgctgcccagcccgtcctctctctcc
tcccccatgttaggcatcgagggtctatccggccgacgcaggaagaaacgcaccagcatc
gagaccaacgtgcgagtggccttagagcgcaacttccacatgaaccagaagcctacctcg
gaggagatcctgctcatggcggagcagctcaacatggagaaagaggtgattcgtgtttgg
ttctgcaaccgcaggcagaaagagaaacgcatcaacccctccagcagcaccacccctccc
ctgcccagccagacctcgcctgttgtgacacacaaagccccctgctacagcccgcacatg
atatcgagtcacggtctgtcccaggtcaccacctgcctcagcacaacagctgccagttct
tcaccatcctgtcccatgactcccgtcagctcagctgcagtaggctccacctcttcttct
gtgaccccgcctcctcacagcacagctagccccgcccctcccaacctcggggcccacggc
ctcaacaccgggaacacaatgatgggagtaagcacagggataaaccaggccctcattggc
agcaatcccctggctaccatgcaagccctggcagccagcagcggtcagctgcccatctcc
agcctggaggggggagcggctcacctgcttctgggtggacctgggggtcccgctatacct
ccttcccttcgcccttccctcttcctaaaccgctccaccctcctccccatggtgacctgc
tccatggcaacagcctccacacctaccatgggactggtcagcggtggtggaggtggtatt
ggcggcccgagactctccttttctcagtctccgccccctggtgccagcaacctcatgagc
ccaacttcgtgccctgaggagtccgcatctccttgttcaagtcccgcctctttctgttcc
tttagcgaagcctcgccgccgcccctgggaggggccatggccgagtga
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integrated database retrieval system
