Etheostoma cragini (Arkansas darter): 117956712
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Entry
117956712 CDS
T07493
Symbol
tap2a
Name
(RefSeq) antigen peptide transporter 2a
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra02010
ABC transporters
ecra04145
Phagosome
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117956712 (tap2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117956712 (tap2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117956712 (tap2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117956712 (tap2a)
Enzymes [BR:
ecra01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
117956712 (tap2a)
Transporters [BR:
ecra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
117956712 (tap2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_22
SMC_N
RsgA_GTPase
AAA_21
AAA_30
AAA_15
AAA_5
AAA_29
AAA_16
ABC_ATPase
Rad17
Motif
Other DBs
NCBI-GeneID:
117956712
NCBI-ProteinID:
XP_034747820
LinkDB
All DBs
Position
14:complement(21831217..21835812)
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AA seq
435 aa
AA seq
DB search
MAGNTTSVTRSTAALISAVCVDLSLFYASGCVVTHSVFGHLARLWVSAALRCLALTAVTL
LILGDLNPLLIRVLTAHSLLLAVLLLAVFETGAKALYREETQCGMLADMRCWLLCTGAAL
AGALFWEVTIPDTEDAAAGKEKKQKARVLFMRVLHLYRPDWLLLLGGLVFLTLAVLCEMF
IPFYTGRVIDILSSQYQPNYPASPNKTVLQDFSLELKAGQMTALVGPSGKGKSTCVSLLE
RFYEQQSGEILLDNEPLKSYDHRFLHKKIAVVSQGPVLFSGSIRDNIAYGLDDCSLDEIQ
EAARKANAHDFIVQLEKGYDTEVGERGGQLSESEKQRIAIARALVRQPQVLILDEITSSL
DAESENKIQQALASCPNQTLLVIAHKLKTIEKADQIVVIGDGRVEERGTHQELMDRKGSY
YKLREKLFSEGNPPQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaatacaacttcagtaacccgcagtaccgctgctttaatttcagcagtttgc
gtcgacctttccttgttttacgcatcgggatgtgtagtgacgcacagcgtgtttgggcat
cttgcgcgtctctgggtttctgcggctctccggtgtttggcgctcactgctgtaaccctg
ctcatcctcggagacctcaacccgttgctgattcgtgttttaacggcgcacagtctgctg
cttgcggttctgctgcttgcggtgtttgagaccggagccaaagctctgtaccgtgaggag
acacaatgcggcatgttggcggatatgcgctgctggctgctgtgtaccggagcggcgcta
gccggtgcgctgttttgggaagtcaccatcccggacaccgaggatgcggccgccgggaaa
gagaagaagcagaaagccagggtgctgtttatgagagtcctccacctgtacagacccgac
tggttactgctgcttggagggctcgtgttcctgacgctcgctgttttgtgtgaaatgttc
atcccgttctacactgggagagtcattgacatcctcagcagtcagtaccaaccaaattat
cctgcgtcccccaacaaaacggtgctgcaggacttttctttggagctgaaggcaggtcag
atgacggcactggtgggtccatctggaaaaggaaaaagcacctgtgtaagtctgcttgag
cgattctatgagcagcagagtggagaaatcctattggacaacgaaccattgaagtcctat
gaccaccgtttcctccacaagaagattgcggtggtgagccaggggcctgtgctcttctcc
ggctccatcagagacaacattgcctacgggcttgatgactgctcattggatgagatccag
gaagcggcacgcaaagccaacgcccacgactttattgtgcagctggaaaaaggttatgat
acagaggtgggggagcgtggcggccagttatcggagagcgagaagcagaggatcgccatt
gctcgagctctggtcagacagccacaggtcctcattctggatgaaataaccagctctctg
gacgcagagagtgaaaacaagattcagcaggccctggctagttgtcccaaccagaccctg
ctggtgatcgctcacaagctgaagaccatcgagaaggccgatcagatcgttgtgatcggt
gacggcagagtggaggagcgagggactcaccaggagctgatggacaggaaggggagctac
tacaaactgagagagaagctcttctccgagggaaaccccccacagtga
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