Etheostoma cragini (Arkansas darter): 117956872
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Entry
117956872 CDS
T07493
Symbol
sdc3
Name
(RefSeq) syndecan-3 isoform X1
KO
K16337
syndecan 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecule (CAM) interaction
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117956872 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117956872 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ecra00535
]
117956872 (sdc3)
Proteoglycans [BR:
ecra00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
117956872 (sdc3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Trypan_PARP
SprA-related
Saf4_Yju2
Motif
Other DBs
NCBI-GeneID:
117956872
NCBI-ProteinID:
XP_034748069
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Position
14:complement(12304533..12334650)
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AA seq
473 aa
AA seq
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MMKLPWLLALTALLAHTATGQTWSPSIDDEGSARDEFYDDEDLYSGSGSGFPEVSKSPTS
VGVSLTTEEPLLLSTTQATGPAPSASPAVEPSPDPEEPTATQLPTEADGESGVFWERERE
LEKEKELERERENEQERLRELEKEREREKQLERERERERERERVREMEREREKERERERE
REREREREKERERQKERELERERELERIKATSQTTAVPRSPAAIPVVTTNPATSPAESTA
PSAGWDDLSTTEEEEDVYLSPEPSTFFPGFDMETTTEEDTSTTTETTPEPTTAAPTTTAA
TTVKIRVPFRPRVPMTTATLAVPTERTSRPQQPTATQEGNNEAGAAGPSGDFEIRDDRRN
DLGRGIMPVDPDLIGNTVDGGSSAAQLPQKNILERKEVLIAVLIGGLLAVVFADFLVIAV
IVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgccttggctattggcgctcacagcgctgcttgctcataccgccacggga
cagacgtggtcgccgtctatcgatgacgaaggctcggcgagagacgagttctacgacgat
gaggacctttactcaggctccggctctggctttcctgaggtcagtaaaagtccgacatct
gtgggtgtgtccttgaccacagaagagcccctcctcctctccaccacccaagcaaccggc
cccgccccctccgcctcacctgcagttgagccgagccccgacccggaggagcccactgcc
acccagctgcccaccgaggccgatggagaaagtggtgtgttctgggagagagagagagag
cttgagaaggagaaagagttagagagggaaagagagaatgagcaagagaggctgagggaa
ctggagaaggagagagagagggagaaacagttggagagggagagagagagggaaagagag
agggagcgggtccgagagatggagagagagagggaaaaggagagagagcgtgagagagag
agggaacgtgagagagagcgagagaaagagagagagaggcagaaagagcgtgagcttgaa
agagagagagagcttgaacgaatcaaggccacctcgcagaccaccgccgtcccacgatcc
cctgctgccattcccgtggtaaccaccaacccggcaaccagccctgcagaaagtacagcg
ccctctgccggttgggatgacctgagcaccacagaagaagaagaggatgtctacctgtca
cctgaaccctcaacgtttttcccaggcttcgacatggaaaccaccacagaggaagacaca
tccaccacaacagagactacccctgagcccacgacagctgcacctaccaccaccgccgcc
actactgtcaaaatcagggtccccttcaggcccagagttcccatgacaacagctactctt
gcggtgccaacagagaggactagccgcccacagcagcccacagctacacaggagggtaac
aacgaggcgggtgctgcgggaccgagtggagattttgaaatccgtgatgatcggcgtaat
gatcttggtcgaggtataatgccagtggatcctgatctgattggtaacacagtggatgga
gggagctctgccgcccagctgccacagaagaacatcctggagagaaaagaagtcttaata
gctgttctgattggtggactgctggcggtggttttcgctgatttcctggtcatcgcggtg
atagtgggaggagtagtgggcgccttgtttgctgccttcctggtgatgttgctggtgtac
aggatgaagaagaaggacgagggcagctacacactagaggaacccaaacaggccaccgtc
acctaccagaaaccagacaagcaggaggagttttacgcgtaa
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