Etheostoma cragini (Arkansas darter): 117956881
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Entry
117956881 CDS
T07493
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117956881 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117956881 (sfpq)
03041 Spliceosome [BR:
ecra03041
]
117956881 (sfpq)
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117956881 (sfpq)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117956881 (sfpq)
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117956881 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
117956881
NCBI-ProteinID:
XP_034748090
LinkDB
All DBs
Position
14:20510571..20532179
Genome browser
AA seq
700 aa
AA seq
DB search
MSRFNNNRGGFGMNNFQQRRGDGGPGGPMRGGLMGNPHFRNHPFQNQNQNRRGANNNFNR
SPNQGPQTPQKPQSLPIIPPPSPGPALTMKGPMQQQQQQKPAPAQQTPTTPATQPKIQSP
PPKPNMTSPPPNIKPETKNQLASPVGNANGQQQKQQQQQPPPQQSPKPGPQLGPQPGPQL
GPKTGPQLGPKSGPMQGPKSGPQQGPKPGPQQGPKSGPQQGPSSGPYQGQKSSPYQGQKS
GPYQGQKSGPYQGQKSGPPAVKPRQESEKMATDNDAAESDASQSKAFRATLSMLLKPGEK
TYTQRCRLFIGNLPNDITEEAFKKLFAKYGEPSEVFINKSKGFGFIRLESRALAEIAKAE
LDDTPMKNRPLRVRFATHSAALSVKNLSPFVSNELLEEAFSQFGMVERAIVIVDDRGRAT
GKGIVEFASKPAARKALDRCNEGVFLLTTSPRPIVVEPLEQFDDEDGLPEKLAQKNPRYQ
AEREEPPRFARPGTFEYEYSKRWKSLDDMEKQQRQQVEKNMREAREKLESEMEDAYHEHQ
ANLLRQDLLRRQEELRRMEELHSKEMQKRKEMQIRQEEERRRREEEMIRNREIEEQMRRK
RDENYRMGNFMDRDREMRMNPGGALGMGDMPFGGSNQKFSMGGLGFEGQQGMGPASAGLM
SNEMRNERFAQGGPRGMGPGNPGFGRVREEFDGPAKKPRF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgattcaacaataatcgtggtggctttggtatgaataattttcagcaacgcaga
ggagacggtgggcccggcggcccgatgcggggtgggctaatgggaaacccacatttcagg
aaccatcctttccagaatcagaaccaaaacagaaggggagcaaataataacttcaacaga
tcgcctaatcagggaccacagactccccagaagccacagtcgctgcccattattcctccg
ccaagtcctggcccggctctcaccatgaaaggcccgatgcagcagcaacagcagcagaaa
ccagcacctgcccaacagacaccgacaacccctgcgacccagccgaagattcagtcacca
ccgccgaaacctaacatgacctcccctccacctaacattaaacctgaaaccaagaaccag
ctggcgtcgccggtagggaatgctaacggacaacagcagaagcagcagcagcagcagcct
ccaccacaacagagcccgaaacctggtcctcaactaggcccacagcctggcccccaacta
ggcccgaaaactggtccccagctaggtccgaagtctggtcccatgcaaggtccgaaatct
ggcccccaacagggccccaagcctggtccccaacaaggccccaagtctggcccccaacaa
ggcccgtcttctggtccctatcaaggccagaagtcaagcccctatcaaggccagaagtca
gggccttatcaaggccagaagtcagggccttatcaaggccagaagtcagggcccccggcg
gtaaagcccagacaggaatcagagaaaatggcaacagacaacgatgcagcggagtcagat
gcgagccagtcaaaggcgtttagggcaacactctccatgctgctgaagccgggtgagaag
acgtacacacagcggtgtcgtctgttcattggaaacctgcccaacgacattacagaagag
gcgttcaagaaactgttcgcaaaatacggagagcctagtgaggtctttatcaacaaaagc
aaaggctttggtttcatccgattggagtcccgtgcacttgcagagatagcaaaggcagag
ttggatgacacgccaatgaaaaacagaccactgcgtgttcgatttgccacacactccgca
gctttgtctgtgaaaaacctgtcaccatttgtttccaatgagctcctggaggaagctttc
tcacagtttggaatggttgagagagccattgtcattgtagatgaccgcgggcgtgccact
ggcaagggaattgtagagtttgcttccaaaccggcagctagaaaggcccttgatcggtgc
aacgagggtgtcttcctgcttaccacgtcaccccggcctattgtcgttgagcctctggag
cagtttgatgatgaagatggtcttccagaaaaattggcacagaagaaccccagatatcaa
gcagagcgcgaggaacctcctcgtttcgctcgtcccggcacattcgaatatgagtactcc
aagcgctggaagtccctggatgacatggagaaacagcagaggcagcaggtggagaagaac
atgcgcgaggcccgtgagaagctggagagcgagatggaggacgcgtaccatgagcaccag
gccaacctgctccgacaagatttgctgaggcgacaggaggaactgcgccgcatggaggaa
ttgcacagtaaggagatgcaaaagaggaaggagatgcagatcagacaagaagaggagcgc
cgccggcgggaagaggagatgattcgcaatagggagatagaagaacagatgcgccgcaaa
cgtgatgagaactacaggatgggcaacttcatggatagggacagggaaatgagaatgaat
cccggtggcgctttgggcatgggtgatatgccctttggtggttccaaccaaaagttctcc
atgggtggactgggctttgaaggacaacagggaatgggaccggcttcagcaggcttgatg
agcaacgaaatgcgcaacgagcgctttgcccagggtggtcctaggggaatgggtcctggt
aatcccgggttcggcagggtccgcgaagagtttgacggtccggctaaaaaaccccgtttt
taa
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