Etheostoma cragini (Arkansas darter): 117956900
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Entry
117956900 CDS
T07493
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117956900 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117956900 (pex1)
Membrane trafficking [BR:
ecra04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
117956900 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
RNA_helicase
AAA_18
ABC_tran
NPHP3_N
AAA_28
AAA_33
NACHT
DUF815
TIP49
AAA_5
Sigma54_activ_2
ATPase
AAA_24
AAA_2
AAA_29
ATP-synt_ab
RuvB_N
TsaE
Viral_helicase1
AAA_7
Mg_chelatase
IstB_IS21
APS_kinase
ORC-CDC6-like
cobW
Parvo_NS1
CLP1_P
Motif
Other DBs
NCBI-GeneID:
117956900
NCBI-ProteinID:
XP_034748112
LinkDB
All DBs
Position
14:complement(12178709..12189979)
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AA seq
1253 aa
AA seq
DB search
MKIMFSNQGIQPITVVFNNTKNCFLQLSQKLISHLSLNENQALELSSSHGSPVFLSWTLN
RTSSSLDSHKVELSRQLGEKLGLKDGEQGFLRPCHQVSSLHQVFVEPLSSDDWEILELHS
AALEQQLLDQIRVVFQNAVFPVWVDSHTAIYIQIASLSPSVPYGRLEQFTELVVSPKSRA
GIGNHDGSAVRNSEKQHFHRQQNMDLSSLSGPSLESTTPVPQSHQWGGIADLKSLLRYMK
KGSYDPVKELPPVPKVPVLLTDSIYRVCGTPPDSLCAMCHVATAVIHIFPWSHGLNAGPT
GSQSPVTYGLLSKVLSPKESRDRAKQAMEKKKNTGVTKIAGGEDMKDEDAVVVRVVCHGT
EMLANKEKSHSRGEIHSGRVLIPQPLAIRLNIIPHSTVRIKPVKSTIKVASSVRLKPLIP
LPEEDDEEIQTAFLGWLHTQSHEPLACLTARSGTILLHGTDAKLEFALTVLKPEPESDPP
DQLFSLSPAVIQKENIQVEREPVTLPDVKSTDEMSPELPSLSILGGIGELSKTGFDFISH
SLLGSPLSRELGATGGGVQGGALLITGSKGSGKSTLSRALCRKAREDLDAHVELVDCKKL
QGKRAETVRQMLQDIFEQAEWRQPSVVLLDDLDHITGTPTSPEHEHGPEVLLQQHIAQSL
KDVVDEVLVHSRLVCLIITSQSEHSLHPSLTEVQGSHFIQGFAHIQPPTQAQRAEILCRL
ILRKTTLSEGTLQTLDLAAVAKETEGYTPQDLELLLERAVHANTVQRGHSDQGVCLSWRD
FVQALKGFTPPSLWGVDLHTPSGVGLESVGGLKEVRQQLMDTILLPAKYPILFSNLPIRH
RSGILLYGAPGTGKTLLARAVAKDSGMNFISIKGPELLSKYIGASEQGVRNVFQRAQAAK
PCILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPAL
LRPGRLDKSLYCPPPDLEARVEILKALSTGAALAADVDLEQLAAETEQFTGADLKALLYN
AQLEAVHNSMVSRTPHELISGSDSDMSLSSMIFPNNSSGSDDSVGEGDPGVGLDQSMVLL
EPSDLQAEDEHHRRNVWRIYFGSSYESELGNSPISGLNSQCVSGPNSMTHDVTRATGREH
SGSLPPAFMFSLQSGYQELSPEHLERLQQDIKNIKNNYRRANEDGVRVHSASIQPGLLLC
QAHVNSALAVTRPSLSKADWNRYTKLYEAYGGAGDGKSLHSVTFKPGQRVTLA
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatgtttagtaatcagggcattcaacccataactgttgtttttaacaacaca
aaaaactgctttcttcagctctcccagaagttgatatcgcatctttccctgaacgagaac
caggctttggagttgtcctcgtcccatggatctccagtgttcctgagctggactctaaac
agaacctcctccagcctagacagccataaagtggagcttagtcgacaactgggagaaaag
cttggcctaaaagatggagagcagggcttcttgagaccatgtcaccaggtctcatcacta
catcaagtatttgtggagcctctgtcatctgatgactgggaaatcttggagctccacagt
gcagcgctggagcagcagctgttggatcagatcagagttgtcttccaaaatgctgtgttt
cctgtgtgggtggacagccacacagccatctacatccaaatagcttcgctttcgccatct
gtgccctatggccgcttggagcagttcacagaactagttgtctctcctaagagccgtgct
ggaattggcaaccatgatggttctgcagtgagaaacagtgagaagcaacattttcacaga
cagcaaaatatggatctttcctccctctcaggaccgtcattagaaagtaccacccctgtt
cctcaaagccaccagtggggtggcatagctgacctgaagagcctgctgcgctatatgaaa
aagggttcttatgacccagttaaagagttaccacctgtacccaaggtccctgtcctcctc
actgactctatctacagagtgtgcggtacacctccagactcactttgcgctatgtgccat
gttgcaactgctgttattcatatttttccttggagccacgggttgaatgctgggccaact
ggaagtcagtcaccagtgacttatggtctgctctccaaagttctctcccctaaagaatca
agggacagagccaaacaggccatggagaaaaagaagaacacaggagttactaaaattgct
ggaggagaggatatgaaagatgaggatgccgtggtcgtcagggtcgtgtgccatggtact
gagatgctagcaaataaggaaaaaagtcacagcaggggagagatccatagtggaagagta
ctgatcccacaacccctggccatcaggttgaatatcattccacattcaacagttagaatt
aagccagtcaaatcaactatcaaagtagcctcctctgttcgcctcaaaccgctaattcca
ctgccagaggaggacgatgaggagatccagacagctttccttggttggctacacactcag
agtcatgaacctttagcctgtctgactgcacggtctggtaccatcctcctacatggaact
gatgcaaagttagagtttgctttaactgtactgaagccagaaccagaaagcgatcctcca
gaccagctgttttccctatcacctgctgttatccagaaggaaaacatacaggtagaaaga
gagccagtgacattgccagatgtaaaatctacagatgaaatgagcccagagcttccatcc
ctcagtattcttggtgggattggtgagctgagtaagactggatttgacttcatctcccac
agccttttgggtagtcccctctcaagagagcttggtgccactggagggggagtccaagga
ggagctctactcatcaccgggtctaagggaagtggaaagagtactctatcccgagccctc
tgtagaaaagctagagaagatctggatgcacatgtggagctggtggactgcaaaaaacta
caaggtaaaagggcagaaacggtacgacagatgttgcaggatatttttgaacaggcggag
tggaggcagccttcagttgtactacttgatgatttggaccatataactggaacaccaacc
tcgccagagcatgagcatggacctgaggtgctgctgcaacagcacatcgcacaaagtctg
aaggatgtggtggatgaggtgctggttcactccaggctggtgtgtctgatcatcaccagc
cagagtgagcattccctccacccctccctgaccgaggtgcaggggtcccactttatccag
ggctttgcacacatccagccacccacccaggctcaaagagcagaaatcctgtgccgtctg
atactccgaaaaaccaccctatctgaggggaccctacagactctagacctggcagctgtt
gccaaggagacagagggatacacgccccaagaccttgaactacttttggagcgggctgtc
catgccaacactgtacaaagaggacacagtgaccagggtgtgtgtctgtcatggagggac
tttgtgcaggctctcaagggattcactcctccctcgttgtggggtgtagacctccacact
ccgagtggagttgggctggagagcgtgggcggcctgaaggaggtgcgacagcagctaatg
gacaccatactcctccccgctaagtatcccatcctgttctccaatcttcctatccgccat
cgctcaggaatattgctgtacggagctcctggtacagggaagaccctgctagccagggct
gtggccaaagacagtggtatgaacttcatcagcatcaagggacctgaacttctgagtaag
tacattggagctagtgagcagggagtccgtaatgtcttccagagggcacaagctgccaag
ccatgcattctgttctttgatgagtttgactcactggcccctaggaggggccacgacagc
acaggtgtaaccgaccgtgtggtcaaccagctcctcacccagctggatggggtggaggga
ctgcagggtgtatatgtgcttgcagccaccagtcgtccggatctgattgacccagccctg
ctgagacctggacgactggacaagtccctctactgcccccctcctgatctggaggctcgt
gtggagatcctgaaggctctgagcaccggtgcagctctggctgctgacgtggacctggag
cagctggcagcagaaacagagcagttcaccggggcagacctgaaggccctgctctacaat
gcccagctggaggccgtccacaacagtatggtctccaggacaccacacgagctgatctct
ggctcagacagcgacatgagcctgtcctccatgatcttcccaaacaacagcagtggctca
gatgattcggtgggggagggtgacccaggcgtggggctggaccagtccatggttctcctg
gagcccagtgaccttcaagcagaagacgaacaccatcgtagaaatgtttggagaatctac
tttggaagctcctatgagtcagagttggggaattcaccaatttccggactgaactcccag
tgcgtctctggaccaaactccatgacccatgacgtaacaagggcaacaggtcgggaacat
agcggctcactcccccctgccttcatgttttcccttcagagtggataccaagagctcagc
ccggagcacctggagcgcctacaacaagacatcaaaaacatcaagaataactacaggaga
gccaatgaggacggtgtccgggtgcattcagcctccatccagccaggcctgctgctatgt
caggctcatgtgaactcggccctggctgtgaccagaccgtccctcagcaaagctgactgg
aacagatacacaaaactgtatgaagcctatggcggtgctggagacgggaaatctcttcat
tcagtcacatttaaacctggacaacgtgtgactttagcttga
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integrated database retrieval system
