Etheostoma cragini (Arkansas darter): 117956906
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Entry
117956906 CDS
T07493
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117956906 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117956906 (ctdp1)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117956906 (ctdp1)
Protein phosphatases and associated proteins [BR:
ecra01009
]
HAD phosphatases
Fcp/Scp phosphatases
117956906 (ctdp1)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117956906 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
PTCB-BRCT
RTT107_BRCT_5
Biotin_lipoyl
Nairovirus_Gn
Motif
Other DBs
NCBI-GeneID:
117956906
NCBI-ProteinID:
XP_034748117
LinkDB
All DBs
Position
14:1419948..1488057
Genome browser
AA seq
981 aa
AA seq
DB search
MEDPADSGGGGGGAASEGPAMQVADICWPTGALPLRLLEWKVKPGSLVNLDSVLALCAPI
SQEKGAEVARLPEKKVKSDRAGVVKELCCQLGQVIPPGGVIVRVEECSHPVVMKGLCAEC
GQDLTQLQSTNGNQQTPISTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMV
DLDQTLIHTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKAFLEKIAKLYELHVFTF
GSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVSIIDDREDV
WKFAPNLITVKKYIYFQGTGDINAPPGSREAQMAKKAGGPSSRPAESTEPGGTLGADEQN
NGLSKRPKDQNPSGIEETTTSQSSQEVPTNERTHPAGVVEDESGRGEGKSEAQVGDRTNA
KEDDSSRTLVTNEAQDSCNSSAPSHGSNNLDFDLSSDSDNDSITEKPPSSVSDSEAKSCQ
AKKSGQEGVTQEAGDGAGEGDVKGGSEAETSLDPAEPSGVLLPDPELGNGCSDRREPETE
SQNSEQSGVTMGEELLDQSMEDEEDEEEEEEADIDQDDHLIYLEEVLERIHAEYYARYAA
YLRKETSETPDIRKIAPELKSKTLEGTTIVFSGLYPTNYPMERTREFYHAKALGAKISKN
LVLSSQDPSRTTHLIAARTGTEKVRQAQGCKHLYVVNPDWLWSCLERWERVEEQLYPLKE
DYSKTPRSNSPAALPDIQDSLQKHIFQPAPIQPRPQPAAPEVRTYDPVTGKLIRRGPQAP
RPPPYLQASGSIMLSDHREQSCLRGSSQSQPDDAAGSSQDDEQPGPSRRKRQPSMSESMP
LYMLCKEDLDSMDREVDDMLGEESDNESEGRGKEKPGNEEAEDEEEERQQRQQQQGDGQI
AEGRLGPQAVSSEETIQTPSREASVPASVPRGHKRKHDAAKEEAEESADESSKDSNEEEG
GSSSEADEMAAALELELNDFM
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctgcagattctggcggtggaggcggaggtgcagcatcggagggccccgcg
atgcaggtggcagatatctgctggccgaccggggctctccctctacggcttctagagtgg
aaagtcaaacctgggtctcttgttaacttggactccgtgctagcactgtgcgctcccata
tctcaagagaaaggggcagaggttgccaggctaccagagaaaaaggtgaaatcggaccgt
gctggagtagtcaaggagctttgctgtcaacttggacaagttataccacccggaggcgtc
attgtccgagtagaagaatgcagccatcccgtagtaatgaagggtttatgtgctgaatgt
ggccaggacctgactcagctgcagagcacgaatgggaaccagcaaactcctatctccaca
gcaaccgtctccatggtgcacagtgtccctgaactgatggtcagctccgagcaagccgaa
caactaggcagagaagaccagcagagactccaccggaacagaaagctggtcctgatggtg
gacctggaccaaacgctgatccacaccactgaacagcactgccagcgtatgtccaataag
ggcattttccacttccagcttgggcgaggagagcctatgctccacacacgactgcgccca
cactgcaaggctttcctggagaaaatcgccaaactctatgagttgcatgtcttcaccttc
gggagccgcctttacgcgcacaccatcgctggctttctggatcctgaaaagaagcttttc
tctcaccggatcctttccagagatgaatgcatcgaccctttctccaagacggggaatctt
aggaatcttttcccctgtggtgactccatggtctccattatcgacgaccgagaggatgtg
tggaagtttgcacccaatctcatcactgtgaagaaatacatctacttccagggcacaggg
gacatcaacgcgccccctggatcacgggaagctcagatggcaaagaaagcaggaggcccg
tccagtcggccggcagagagcaccgaaccaggaggaacactcggcgccgatgagcaaaat
aacggcctcagtaaaaggcccaaagaccagaacccttctggaattgaagagaccacaaca
tctcagtcgtctcaggaagtaccgacaaatgaacggacacatcccgcaggggttgtggag
gatgaatcgggacgaggcgaaggaaagtccgaagctcaggtgggagacagaacaaatgct
aaggaagatgatagcagcaggacactggtgacaaatgaggcgcaggacagttgcaactca
tcggcgccgagccatgggtccaataacttggactttgacctttccagtgacagtgacaat
gactccatcacagaaaagcccccctcatccgtaagtgatagcgaggccaagtcttgccag
gcaaagaagtccggtcaggaaggagtcacgcaagaggcaggggacggggcaggggaaggg
gacgttaaaggcgggagtgaagcagaaaccagtttggacccagcggaaccttcaggagtt
cttctcccagaccccgagctgggaaatggctgttcagataggagagagccagaaaccgag
tctcagaacagtgaacagtccggggtgaccatgggcgaggagctgctggaccagagcatg
gaggacgaggaggacgaggaggaggaagaagaagccgatattgaccaggacgatcacctg
atctacctggaggaagtgctggaaaggatccacgccgagtactacgcacgatacgcggcc
tatctgaggaaggagacctcggaaacaccggacattcgcaagatcgccccggagctgaaa
agcaagacactggagggcacgacgatagtgttcagtggcctgtacccgaccaactacccc
atggagagaacccgtgagttctaccatgccaaagcacttggggccaagattagcaagaat
ctggttcttagctcccaagatcccagtcggacaacgcatctcatcgcagctagaactggc
accgagaaggttcgtcaggcccaaggctgcaagcacctctatgttgtcaacccagactgg
ctgtggagctgtctggagcgctgggagagggtggaggagcagctgtaccccctaaaggag
gactattccaagacgccaaggagtaacagtccagcagcactacctgacattcaggattcc
ctgcagaagcatattttccaaccagctcccatccagcccagacctcaacctgcagccccg
gaagttcggacctacgaccccgtcacagggaagctgatccgcaggggccctcaggcacct
cggcccccaccttacctccaggcgtccggatctataatgctctctgatcacagagagcag
tcttgtctcaggggatcttcacagagtcagccagacgacgcagcggggtccagccaagac
gacgagcagccggggccgtctcgtcggaagcggcagccgagcatgtccgagagtatgcct
ctgtacatgctctgcaaggaggatctggacagcatggacagagaggtggatgacatgtta
ggcgaggagagcgacaacgaaagtgagggccggggcaaggagaagccaggcaatgaggag
gcggaggacgaagaggaggagcggcagcagcggcagcagcagcagggagatggacagata
gcagaaggacggctcggtcctcaggccgtgagctcggaagagaccatccagaccccatcc
agggaggccagtgtgccggctagtgtgccaagaggccacaaacgtaagcacgatgccgct
aaggaggaggcggaggaatctgccgacgagtcctctaaagactccaacgaggaagaagga
ggaagcagctcagaggcggacgagatggccgctgccttggagttggagctcaatgacttt
atgtga
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