Etheostoma cragini (Arkansas darter): 117956956
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Entry
117956956 CDS
T07493
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117956956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117956956
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117956956
03012 Translation factors [BR:
ecra03012
]
117956956
04131 Membrane trafficking [BR:
ecra04131
]
117956956
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117956956
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117956956
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117956956
Translation factors [BR:
ecra03012
]
Eukaryotic type
Elongation factors
117956956
Membrane trafficking [BR:
ecra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117956956
Exosome [BR:
ecra04147
]
Exosomal proteins
Proteins found in most exosomes
117956956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
117956956
NCBI-ProteinID:
XP_034748252
LinkDB
All DBs
Position
14:20429084..20432875
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLETSEKMGWFKGWKVERKEGNASGTTLLEALDAILPPAR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVTFAPCNLTTEVKSVEMHHESLA
EAAPGDNVGFNIKNVSVKEIRRGYVAGDSKNDPPKGADNFNAQVIILNHPGQINAGYAPV
LDCHTAHIACKFSELIEKIDRRSGKKLEDAPKFVKSGDAAIVKLIPQKPMVVESFSSYPP
LGRFAVRDMRQTVAVGVIKAVETKDVSGKTTKAAEKAQKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccacctccaccggtcatctgatctacaagtgcggaggaatcgacaagagaaccatcgag
aagttcgagaaggaagccgctgagatgggaaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggctgagcgtgagcgtggtatcaccattgacatcgctctctggaagttt
gagactggcaggtactacgtgaccatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggaacctctcaggctgactgcgccgtgctgattgttgctgctggcgtt
ggtgagtttgaggccggtatctccaagaacggccagacccgtgagcacgccctgctggca
ttcaccctcggtgtgaagcagctcatcgttggagtcaacaagatggactccaccgagccc
ccttacagccaggcccgtttcgaagaaatcaccaaggaagttagcacctacatcaagaag
atcggctacaaccccgccactgttgcctttgtccccatctctgggtggcatggagacaac
atgctggagaccagtgagaagatgggctggttcaagggatggaaggttgagcgtaaggag
ggtaatgccagtggaaccacactgctggaggctctggacgccatcttgcctccagcccgc
cccaccgacaagccccttcgtctgcccctgcaggacgtctacaaaatcggcggtattgga
actgtaccagtcggtcgtgttgagacaggtctcctgaagcccggtatggtcgtcaccttt
gctccctgcaacctgaccactgaggtgaagtctgtggagatgcaccacgagtccctggca
gaggctgcccctggtgacaacgtcggcttcaacatcaagaacgtgtcagtcaaggagatc
cgtcgtggatacgtggctggagacagcaagaacgacccacccaagggagctgacaacttc
aacgcccaggtcatcatcctgaaccaccctggccagatcaacgctggttatgcacctgtg
ctggattgccacacagctcacattgcctgcaagttcagcgagctcatagagaagattgac
cgtcgttctggcaagaagcttgaggacgcccctaagtttgtcaagtctggagatgccgcc
attgtcaaactgatcccacagaagcccatggttgtggagtccttctccagctaccctccc
ctcggtcgttttgctgtgcgtgacatgaggcagacagtggctgttggtgtcatcaaggct
gttgagaccaaggatgtatccggaaagaccaccaaggccgcagagaaggcccagaagaag
aaatga
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integrated database retrieval system
