Etheostoma cragini (Arkansas darter): 117957040
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Entry
117957040 CDS
T07493
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117957040
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Other basic domains
RF-X
117957040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
117957040
NCBI-ProteinID:
XP_034748494
LinkDB
All DBs
Position
1:20406187..20434136
Genome browser
AA seq
1431 aa
AA seq
DB search
MAEEDPQQQQSDRGARSLPGLLTGLQGAEASALQLRIKNSICKSVQSKVENILQDVEKFS
DIEKLYLYLKLPAGPSSSIDKSEQSALSSSRTQQMHAFNWIRHHLEEYPETSLPKQEVYD
EYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRGKSKYCYSGLRKRLFVHMPSLP
TLDLHKTGDELQCDVLESPGQFSSIKEDVRFAACDLVCEWAQKVLKRQFDAVEELARFLI
DSHYISNKSLAALTIMTGTATEVKPPQMVSAFVPTAEAHSFQPHVMTLSSPSVDAKQQLQ
RKIQRKQQEQKLHSPLPGEGQTKRADDSVPCASPTPPSPQPTIGIMVAAVQSPITVQRSR
QLLSPSPMGTVESKMLPINFQMVTQPLQAVKQSPKTPQNILASPLGERTARQRYAQILPK
PATTTAVTLRSPSTMIIGNSPVKTVMTTCHVSPVSLVKMTAISLAPNSSNTTTSFTKAPL
RPASAGTSTSAVAENFSSNQSIRSTSAVPILTPMARPGQTTNNHTIDVELEVEAIHKNSQ
MQNPGTRVFTQEPMANRTGGALQRAASVPIPQSKGFLGLEETSRTNCNRKSSLSPNTLAA
VQNCNNGANNTSTMHLTPCTQNISTVSLLNTNIPPSFVESSSVTAAKEGFFSTKSLRKRS
GLSPDLSPIKRVFMPQQPELEGAAGLGYGIRNMVGNVLRPGAPTRPESAPATREVEMKMN
SLPVHAHWTSSFRATDFFSVAKTQSSVQRTDPSTVMETSTSLTQALIQQRQGHAMANVHA
IPNNSGLQTHSGVSDVRSSATGSLDPQQHSYTQSNPVTEHFMNQASSLSQLSMQTDMDYC
PFDDDVTQDSIVEELVLMEEQMKFNNQQEFGDCVTMQSQHATMPDNIMSTNQTMTAFYHA
ANSHSNPMQTPTPTPTPTPTPTPTEMMGGAQGLSGESPFSRIASTTPVDSVLGNSRHTPV
GTPHSNCSSTVPPSPVECRNPFAFTPINSSITGFHDGSTVSSSPVKPMQRPMATHPDKTR
LEWMNNSYNSSSGSLNKSNSGIGILPSYQGLIGDHFQKPHAFAVPHTRHHDSHFGRLTPI
SPVQQQVASMTNLAKQEGFAVPAPLDNKATNTAATTFQCRSVSPAVHMRNLSGNTGNLPH
IPRSVVSPFNSPVIPEMLNIFVNSQTNLGVSSMAQRSHSVPLNIMMQTEVRHTSGQQCNS
KNITNVLLSKLDGDHDDTIRGLGINNLPSSYTARMNLTQILESDPNLSCSDNHLSLMTSD
STSTCKLQRPNYLIENTINEQMILAAADTRVQSASREQHQQQTQAMLLTLSSQQDQEELQ
QQLDFSTSVRDLLTDNSLTAGSQLMDQVSGVADFPCEIRMASELSSSIHDLNALDTDLLF
DPSQQQGQYQNAAADELVNDALFQQITSETAHSSGLDWLESKDHPTVGLMG
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaggacccccagcagcagcagtcggaccgcggggctcggagcctgcccggc
ctgctcaccgggctgcagggcgctgaggcgagtgctctgcagctcaggatcaagaactcc
atctgcaaatctgttcaatcaaaagtggaaaacattctgcaagatgtggagaagttctca
gacattgaaaaactctacctctaccttaagttgcccgctggtccgagcagtagcattgat
aaaagtgaacagagcgccctgtcctcaagccgcacacaacagatgcatgcgttcaactgg
atccgccatcatttagaggaatacccagagacgtctcttcccaaacaggaggtctatgat
gaatacaagagcttctgtgacaatctgaactatcacccactgagtgctgcagactttgga
aaaatgatgaaaaatgtcttcccgaacatgaaggcgcgtcgacttggcatgagaggaaaa
tcaaaatattgctatagtggactgaggaagaggctctttgttcacatgccatctttaccc
actctggatctccataaaacaggggatgagctccagtgtgatgtcctcgagtcaccgggc
cagtttagcagcataaaggaggacgtgcgatttgcagcctgtgatctggtgtgtgagtgg
gcccaaaaggtgctgaaacgccagtttgatgccgtggaagaattggctcgtttcctaatc
gacagccattacatcagcaacaagtctctggctgctctcaccattatgaccggcacagca
acagaggttaagcctccacagatggtctcagcgtttgtccccactgctgaggctcactcc
ttccagcctcatgtgatgaccctgtcctcaccttctgtggatgcaaagcagcagctccag
aggaagatccagaggaaacaacaagaacagaagctgcactctcctttacctggagaggga
caaaccaagagggcagatgacagtgtgccttgtgccagccccacccctccgtcacctcag
ccaaccataggcatcatggtcgctgctgtccagagccctatcacggttcaaagaagcagg
cagctgttgtcccccagtccaatgggaacagtagagagtaaaatgctgcctattaacttc
caaatggtgacacagccacttcaggcagtgaaacagagccccaaaaccccgcaaaatatt
ctagccagtcctttgggagaacgcactgctcggcagcgctacgcgcagatcctccccaaa
cctgcgaccacgactgctgtcaccttgcgctcgccctccaccatgatcattggcaacagc
cctgtaaagaccgtgatgactacgtgccatgtcagcccagtcagtttggtcaagatgaca
gccatatctcttgcgcccaacagcagcaataccaccacttccttcacaaaagcccctctg
cggcctgcatctgcaggcactagtacttctgcagttgcagaaaacttcagttccaatcaa
agcattaggagtacctctgcagtccccattctgaccccaatggcaaggcctgggcaaact
actaacaatcataccatcgatgttgaattggaagttgaagctatacataaaaacagccaa
atgcaaaatcctggcactcgagttttcactcaagaaccaatggcaaataggactggcggg
gctttacagagggctgccagtgtgcccatacctcagtctaaaggcttcctgggtctagag
gagacatccaggaccaattgcaacagaaagtcctctttaagccctaacacattggccgct
gtccaaaattgcaacaacggcgctaataacacaagcactatgcacttaactccctgcact
cagaatatcagcactgtttctttactgaacaccaacataccaccttcatttgtggaaagc
agcagtgtaactgcagcaaaggaaggtttcttctccactaagagcctcaggaaacgttca
ggcctcagtccagacctttctccaatcaaaagggtttttatgccccagcagccagagcta
gagggcgctgctggtcttggatatgggattagaaacatggttgggaacgtcctcagacca
ggagctccaactagacctgaaagtgcaccagctaccagggaggtagagatgaaaatgaac
tctcttccagtccacgcacactggacttcttctttcagagccactgacttcttctctgtt
gccaaaacacagagctcagtgcagaggacagacccttccactgttatggaaactagcacc
tcacttactcaagcattaatacaacaacggcaggggcacgcaatggctaacgtgcatgcc
atacctaataactccggcctccaaacacattcaggtgtgagtgatgttaggagttcagcc
acagggagcctggaccctcaacaacatagctacactcagtccaaccctgtcactgaacac
tttatgaatcaagcttcatcgttgagccagctctctatgcagactgatatggattactgt
ccctttgatgatgatgtgactcaggacagcattgtggaggagctggtgctgatggaggag
cagatgaaatttaacaaccagcaagagtttggagactgtgttacaatgcaaagccaacat
gctacgatgccggacaacataatgtccaccaatcagaccatgactgctttctatcatgct
gcaaacagccacagcaacccgatgcaaactccaacaccgacaccgacacccacacccaca
cccacacccacggaaatgatgggaggagcccaaggcctctccggagagagccctttctcc
cgcatcgcctccacaaccccagtggacagcgtactgggaaacagtcgtcacaccccagtt
ggtacacctcactccaactgcagcagcactgtgcctcccagtccagtggagtgcagaaac
ccgtttgcatttacacctatcaactccagcatcactggtttccatgatggcagcaccgtt
tccagcagcccggttaagcccatgcagagaccaatggccacccacccagacaagacccgg
ctggagtggatgaataacagttacaacagcagcagcgggagtctaaacaagtcaaacagt
ggaattggaatcctgccaagctatcaaggcctgataggtgatcattttcaaaagcctcac
gcctttgccgtccctcacacaaggcaccatgacagccattttggccgcttgactccaatc
tcgcctgtgcagcagcaggtagccagcatgactaacctagccaagcaggagggctttgcc
gtgcctgcccctctggataacaaagccaccaacacagctgctaccacctttcaatgtcgc
agtgtaagccccgccgtgcatatgaggaacctgagtggaaacacagggaatcttccccat
atccctcgttcagtagtgtctccctttaactctcctgttattcctgagatgttaaacatc
tttgtaaacagccagacaaatcttggggtgagcagcatggctcagaggagccattctgtg
ccgctcaacatcatgatgcaaactgaggtccggcacacgtcgggccaacaatgcaacagc
aaaaacatcaccaatgtccttttgagcaagctggatggggaccatgacgacactattcgg
ggtctgggcattaataatttaccctccagctacactgcacgcatgaacctcacccagatc
ctcgagtctgacccaaacctctcctgcagtgacaaccatctcagcctgatgacctcagac
tccaccagcacatgcaagctgcagaggccaaattacctcatcgaaaatactatcaatgaa
caaatgatcctcgcagcagctgacacccgagtacagtcagcttctagagagcagcatcaa
caacagacgcaggctatgttgctaactttgagctcacagcaggatcaagaagaactacag
cagcagttggatttcagcaccagtgtgagagacctcttgacagacaacagccttactgct
ggcagtcagctcatggaccaggtgtcaggtgtggcagatttcccctgtgaaatcagaatg
gcgtcggagctctccagtagcatccatgaccttaacgcactggacacagaccttctgttt
gaccccagccagcagcaggggcaatatcaaaatgctgctgcggatgagttggtgaatgat
gcgctgtttcagcaaattaccagcgagacggcacattcaagtggtcttgactggctcgaa
agcaaagatcatccaactgttgggttgatggggtga
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