Etheostoma cragini (Arkansas darter): 117957130
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Entry
117957130 CDS
T07493
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117957130 (irx1b)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117957130 (irx1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117957130
NCBI-ProteinID:
XP_034748610
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Position
14:complement(2736815..2740797)
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AA seq
464 aa
AA seq
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MSFPQLGYPQFLSAEVYGGERPASAREGGAEGGVSSSATAAAVGSMLGMYGSPWAAHNYS
AFLPYGGATDLALITQMGSQYELKDSPGSHPASLPVHAAQGFYPYGQYPYGDPSRAKTAT
RETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTWGR
SAEDRDGRIFSSDNEDEHGKNGSDDEDEEEEIDLETVDIERPEEQRAGEQGSGKGEGEGE
GEGEAGLADGEQASEPKSSESSRTLSVDGLRGVEAAISLNRSPVVKLAVDLSPSRQECQR
PPQSKPKIWSLAETATAPDSAHKPSPAGLPHHAALASAGHPALLPGHGIYTCQIGKMHNW
ANAAFLNANSLLNMRSLLGGAPAGHLPLHGAVPVVRHDARQAAAGRGTSGTEDDSDVESS
GSFSPKRDDEESDHRPNSLKSPFQLITDRPHHGTAPQRVLTTTL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctggggtacccccagttcctcagtgccgaggtgtacgggggcgag
cgaccggcctctgcccgggaaggaggcgctgaaggcggcgtgagctcgtccgccaccgcc
gcggctgtcggctccatgctggggatgtacgggagcccatgggcggcccacaactacagt
gccttcctgccgtacggcggagccacagacctcgccctcataacccagatgggctcccag
tatgagctgaaggacagcccggggtcccaccctgcgtctctacctgtccacgccgcccaa
ggcttctacccgtacggccagtacccgtacggggacccgtccagggccaagacggccacc
cgggagaccaccagcaccctgaaggcctggcttcaggagcaccagaagaacccttacccc
accaaaggagagaagataatgcttgctatcatcacccggatgacactcacacaggtgtcg
acgtggttcgcgaacgcccgcagacgcctgaagaaggagaacaaggtgacctggggccgc
agcgccgaggaccgggacggccgcatcttcagcagtgacaacgaggacgagcacggcaag
aacggcagcgacgacgaagacgaagaggaggaaattgatttggaaactgtcgatatcgag
agacccgaggaacagcgagccggggagcagggctccgggaagggggaaggagagggagag
ggagaaggagaggcaggcctggccgacggagagcaggcctcggagccgaagagctcagag
agcagcaggacactttctgtggacggcctgagaggagtggaggcggctatttctctcaac
agatcgcctgttgtcaaactcgcagtggatctttctcccagcagacaggagtgccaaaga
ccaccgcagagcaaacccaaaatctggtctctggctgagaccgccacggccccggacagc
gctcacaaaccttcccccgcgggccttccgcaccacgcggctttggcctccgccggccac
ccggccttactcccgggtcatgggatttatacttgccagattggcaagatgcacaactgg
gccaacgcggcttttctgaatgccaactctcttttgaacatgaggtcgctcctcggcggg
gcgccggccggacacctgcctctccacggcgcggtgccggttgtgcgtcatgacgcacgg
caggcggcggctggccgcggaacttcggggacggaggatgacagtgatgtagagtcgtca
ggaagcttcagtccaaaaagagatgacgaagagagcgaccacaggcctaattccctgaag
tccccattccagctgatcactgacagacctcaccatgggacagcaccacagcgagttctg
accacgacattatga
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