Etheostoma cragini (Arkansas darter): 117957135
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Entry
117957135 CDS
T07493
Symbol
nedd4a
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4a isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
ecra04144
Endocytosis
ecra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117957135 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117957135 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
117957135 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117957135 (nedd4a)
04121 Ubiquitin system [BR:
ecra04121
]
117957135 (nedd4a)
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117957135 (nedd4a)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117957135 (nedd4a)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117957135 (nedd4a)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
HECT type E3
117957135 (nedd4a)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
117957135 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
117957135
NCBI-ProteinID:
XP_034748653
LinkDB
All DBs
Position
1:20427016..20459053
Genome browser
AA seq
1275 aa
AA seq
DB search
MARRLRLHFASRRSNTDPLSESLSSHGEQSRVGVSARSPAESLAHSSVHLKVTHLSPNYA
NLQQYSSVFVPKVNTGGFNKKSILQISLQPYGKLSGELNGNIKDGDPGASEGGAGSGSDG
SSCSSMASDAGYCSSNSIFEPEALEKHRTTQERGLLNRKSKVPLRRCSSLVIFPKSPCST
PPASPVSPVALPVLPPARGSYQSSLQTSASEFLQDKELNCKESTTTAARGRRLPKGSSSS
ELKDTKHIVQCNIPRQDEPKVKMEDMSKIRELSSTVDRLNRHSSSVLLHFAHQRPMMSAK
GATTTATFNMEYPEDPNPATHLEGEPHPHKKLYRSTSACLFSSTKLSEKAHKVCSLEKGQ
ERPDENHCYRAIQRSFSLEVPYANTGISCHVSNPKLSSPLSPHVHIHLSPCCPAKLPSFI
SDVNTSHKGNNTPQSPVQNTKTRDDFLGQVDIPLNQIPTENPNTERPYTFKDFLLHPRSH
KSRVKGHLRLKMTYQPKNPDSEEETTEQTEDMDPGWEFLEAQDMSGPRQNQLLPALPSGW
EERQDNLGRTYFVNHESRTTQWKRPTIQNVDVEMQRRQNNNIDAEHAIITRRQISDHDEN
TAQESPESWEIITEDMSTLYHSNNHLTSSPPHGPAEFHPSRAELRNTHISRATAGELRTY
QTDHTNNSSHSSLRGNAQTSTGEEHPVNPVLIPTSTGLPPGWEEKRDSKGRRYFVNHISQ
TTSWTRPLIQKTSDAPVALAAAAAAATQSGAGVAQSLTPPLPSMSPEESPQHTPSPDATH
KSGFLPAGWEVRSAPNGRPFFIDHNTKTTTWVRKQQASDVLFPLIEDPRLKIPVNTRKRP
PLDPSDLGPLPPGWEERVHSDGRIFYIDHNTRTTQWDDPRLQNSAITGPAVPYSRDYKQK
YDYFRKKMKKPADIPNRFELKLKRNAVLEDSYRRILSVKRADLLKARLWVEFEGEKGLDY
GGVAREWFFLMSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMA
VYHGKLLDAFFIRPFYKMMLQKPITLQDMESVDSEYFNSLKWILENDPKDLDLRFTIDEE
LFGQTRQHELKLGGAEIVITNENKKEYIHLVMQWRFVNRIQKQMSAFKEGFFELIPQDLI
KIFDENELELLMCGLGDVDVNDWRENTKYKNSYCSNHVVIQWFWKTVLLMDAEKRIRLLQ
FVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTSDKLPRAHTCFNRLDLPPYESFEELREK
LHIAIENAQGFDGVD
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcggctgcgcttgcattttgcatcaaggagaagcaacacggaccctctgtca
gaaagcctcagcagccatggtgagcagagcagagtcggtgtgtcagcccgtagccccgca
gagagtctggcgcacagttctgtacacttgaaggtgactcatttgtcaccaaactatgct
aatttacagcagtactcttcagtattcgtacccaaggttaacaccggaggatttaataaa
aagagcattctgcagatctcgctgcagccctatggaaagctcagtggagagcttaatggc
aatataaaggatggagacccgggggccagtgaaggaggagcaggcagtggctctgacgga
agctcgtgcagcagcatggccagcgatgccgggtactgcagcagcaacagtatatttgag
ccagaggctttagaaaagcacaggaccacccaggagaggggtctactcaaccgcaagtcc
aaagtcccgctgagacggtgctcctccttggtcatatttccaaagagcccctgcagcacc
ccaccggcttccccagtcagtccagtggctctacctgttctcccaccagccagggggtct
tatcagtcatctcttcagacatctgccagtgaattcttacaagataaagaattgaattgc
aaagagtccaccaccacggcagcaaggggccgacgtcttccaaaaggaagctcttcatca
gagttgaaggacaccaaacacatagtgcaatgtaatattcctagacaggatgaaccaaaa
gtaaaaatggaggacatgagtaaaataagggaactttcctcaactgtagacagactgaat
cgtcactctagcagcgtgctgctgcactttgcccaccagagaccaatgatgtctgcgaag
ggagctacaaccaccgctacattcaatatggaatatcctgaggatcctaacccagccaca
catcttgagggtgaaccccaccctcacaaaaaactgtatcgtagtacttctgcttgtttg
ttctcctcaactaaactgtcagaaaaagcccacaaggtctgttcattagaaaaaggacag
gaaaggcctgatgaaaaccattgttatcgtgccatacaaaggagcttttccctggaggtg
ccctacgctaacactggaatttcatgtcacgtttcaaatccaaaactcagtagccctctc
tctccacatgtgcacattcatttgtctccttgctgcccagctaagttgccgagctttatt
agtgatgtaaacacaagccacaaaggaaataacacaccacagagcccagttcaaaacacc
aagacacgtgatgactttctgggacaggtggatatccccttaaatcagataccgacagaa
aatcctaatacagaaaggccatacacattcaaggattttctgctccacccacgaagccac
aagtccagagtcaaaggtcacctgcgtctcaaaatgacctaccagccaaaaaaccctgat
tcagaggaggaaacaacagaacagactgaggacatggatcctggttgggagtttctggag
gctcaggacatgtcaggtcccagacaaaaccagctgctgcccgctctgccctctggttgg
gaggagcggcaggacaacctgggaagaacctactttgtcaatcatgagagcagaaccaca
cagtggaaacgacccacaattcagaacgttgatgtggagatgcaaagaagacagaacaat
aacatagatgcggagcatgctattattacacgcagacagatctcggaccatgatgagaac
accgcacaagagtctcctgagagctgggagatcattacagaggatatgtccaccttgtac
cacagcaataaccacctcacatcaagtccaccccacgggcccgcagagttccacccgtcc
cgtgctgagctgagaaacactcatatttctcgggccacagctggcgagctgcgcacttac
cagacggatcataccaataattcaagccattccagtctcagaggaaatgcccagacttca
acaggagaggaacatcctgttaatcctgtgctaattccaacctcaactgggctgcctcca
ggctgggaggagaagcgagacagtaaagggagacgctactttgtcaaccacatcagccaa
accacttcatggacacgacctctcattcagaaaacctcagatgcaccagtagcactagca
gcagctgcagcggcagcaacacagagtggggcaggtgtagcccagagcctgactccaccc
ttgccatccatgtccccagaggaatctcctcagcacaccccaagccctgacgccacacat
aaatctggcttcctgccagctggttgggaggttcgcagtgctcccaatggaagaccgttt
ttcatcgaccacaacactaagacaactacctgggtgagaaagcagcaggcttcagatgtg
ctttttcctctgatcgaagatcccaggctaaagatccctgtgaacacgagaaagagaccc
ccacttgacccatctgatcttggccctctgccgcctggctgggaggagagggtccacagt
gatggcaggatattctacatagatcacaataccaggaccacacaatgggatgatcccaga
ttacagaactcagctataactggaccagcagtgccttattccagagattataaacagaag
tatgactacttccggaagaaaatgaagaaaccggctgacatcccaaaccgctttgagctg
aaactgaaacgtaatgcggtgctggaggactcgtaccggcgcatcctctcagtgaagagg
gcggacctgctgaaggcaagactgtgggtggaatttgagggagaaaaaggactggactat
ggtggcgtggccagggaatggttcttcctcatgtccaaggagatgttcaacccgtactat
ggactgtttgagtattctgccacggacaactacacactgcagattaaccccaactcaggt
ttatgtaatgaggaccacctgtcctacttcaagttcatcggccgtgtggcaggcatggcc
gtatatcacggcaaactgctcgatgcattcttcattcggcctttctacaagatgatgctg
cagaagcccatcactctccaggacatggagtctgttgacagtgaatatttcaactccttg
aagtggattttggagaacgacccaaaagacttggacttaaggttcaccatcgatgaagag
ctgtttggacagactcgccagcatgaattgaagctgggtggcgcagagattgtcatcact
aatgaaaacaagaaggaatacatccatctggtgatgcagtggaggtttgtgaacaggata
cagaaacagatgtctgccttcaaagagggattctttgagttgatacctcaagatctgatc
aagatctttgatgagaatgagctcgagctgctcatgtgtggtcttggcgatgtggatgtg
aatgactggagagagaacaccaagtacaagaacagctattgctccaaccacgttgttatc
cagtggttctggaaaacggttctgttgatggatgcagaaaagcgaatcagactcttacag
tttgtgacaggaacatcaagggtcccgatgaatggctttgctgaactctatgggtctaac
ggaccacagctgttcactattgagcagtggggaacaagtgataaactcccccgagcccac
acatgcttcaatcgactggacctgcctccttatgagtcttttgaagagctgagggaaaaa
cttcacatcgccattgagaatgcacaaggcttcgacggggtggattag
DBGET
integrated database retrieval system
