Etheostoma cragini (Arkansas darter): 117957211
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Entry
117957211 CDS
T07493
Name
(RefSeq) uncharacterized protein LOC117957211
KO
K06252
tenascin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117957211
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117957211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117957211
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117957211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
FN3_Tor_3rd
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
117957211
NCBI-ProteinID:
XP_034748699
LinkDB
All DBs
Position
14:23988484..24027716
Genome browser
AA seq
2576 aa
AA seq
DB search
MFSSVLVLVLVLVLAAPVLLTPSASHQLQVRGQRAPRDTRQDSIKVVISEGCVTQGESSD
VTRGGKEIDLTPGSPLILTHKINLVPSGSGSGSCGCEADLAALRERLERLEREVSSLREK
CGGPEGGCCTSKESKAFLIDHLQKGDHLLLPLCTPFTPRLQIPFISPAKEQKNVPGRWFT
LGPVMPSSHWLQSAPVNPRRQTQRPLTHRPLLLQLPGQPLAAQSGPAKPTSQAHTPFTHF
PRLLQLLGQALPEQSGPLNPSSHTHSPSIQRPLLLQFPEQAVSAQSSPVKPLWHTHLPST
HLPRSPQSLRQDLSEQSGPLNPSSHTHAPSIQRPLLLQLPGQAVSEQSAPVKPLWHTHLP
LTHFPRLLQSSGQAFFFEQSLPVNPGWHTHSPLTQRPLLLQLPGQAVSEQSAPVKPLWHK
HLPLTHFPWLLQSSGQAFLEQSGPENPGWHTHSPSIQRPLLLQLPGQAVSEQSAPVKPLS
HTHFPSTHLPRSKQSFGQILSEQSGPLNPSSHTHSPSTQRPLLLQFPGQAVSEHSAPVKP
LWHTHFPSTHLPWLLQPSGQPLREQSGPVKPGSHRHRPSTHRPLSLQFPGQLVRLQSGPL
KPEKQTHLPSTQRPWSLHSLGHSSISGLMEQPAPEAEGTDALNKGDDTQRHVLLPLPLIL
SYGVLETPPAVPLPLISSYPVPETSPAVPLPLISSYPVPETSPAVERVPTTPHLVLPSPR
DLSCKTSPAIPLLLISSYGVLETPPAIPLLLISSYPVPETSPAIPLPLISSYGVLETPPT
VPLPLILSYRKESDPQIRVQVEGGLTSYTQTGLAAGQDYTASVTGEVGGKRGAETSAEFS
TLIFGPTNLRVVKTTSTSAVVQWEPSQGEIDRYRLTVAPNDGSGKSQEMTVPAGQDSAHL
QQLVAGRVYDITLVAEKGASQSKPATTQATPGKTLPRVAMAASTMQVPLAPGQNISDGDQ
ELNPALEVFDQQSSREDGSESDGPNRHSTSSVTARTKPLFSRKMPVNGTKLKVAERPTLY
RKPNGTLRFNTTRVVPGWRNVGQGSLRKSPVGQKKKEPMLPKKPKPGVPTSEGRTTALHE
RDPSVDALSTRRRHDENKALSAVSGTDSDTYRQSSSEEPIVGVDSERQPDVGVAGQENHT
APVSPGPTGTVQSQEKKCMNKVKVTHIRLPHQGRGSGCKGDGTELVRKTAGSDQGSSETD
DLKPSSAETDLDYTPGPLHKLLKDTFDGLNIKTFSVHLSEPSNLSLDAETVRKQIISGLK
PLPPSFSWSSSSSSSTLQSPSRSSAKPTSSSVPSSPSSLASPSLAPSSSTAPSSLTWSMA
SPSTLPSPPSSSSLSSSDKSGSVGSNEPDVDNSQSATDVKSPEDMKLTSSEKGGVHLFQR
TPSKHGYVRRPGPNAGLFQNKTRLNLRLPHHLTPRLNLIPRRETETGPTSTNELSSSPSS
SDLEDSSTVDVSASLRNTSGDKDGATKPSSSGVQQNQEKMPTERGRFPVRRFPGYLHRPN
LGPLQNKTRPNSSQLPPPSRPLNPASETRRQHVSSTEATVTLSSVAKESHSAEGTAPKEG
ENEDRVVTSMSTKFNQTLRRSEAFSTHRPTTKAMGSKGTYFRRSQLSDGRSQNKTRTNLR
PPQHPHRGPMRKPSPARKQTGGITVGSQISHLEKDSTLEIPDDQSGGQDALMPPQGVQIR
RLGEQGQDTAVRPQTNKLEEGDGAPIQTTRSGEEETSTLDSKADSDTHKDGVNAGKHPGA
TSRGKPTLKQTSDSRHGDPRSVKLPKRQPPTPTRSMTAQNPTRIRHPHNGGNTRTEDKTR
NIAKKLFESKTESIDSQLQMGSDGPSSIVTREPLDYVGVTNRTSDGFTLVWDSPEDKYKN
FVVTSKDIGKDEGPKKDSKKDQEEEEQEVSRKEAKDHEEEQEDLRKEAKDHEEEQEDLRK
EAKDQEEEKEDLRKEGGNEEEEVTQQPTKETHSENGSSEHENKVPESVSMPVPRIQSGST
AKPVAGTDNTFKKVISGSSRSFQFENLPPQTEYTVTLLGKGPGLLSRLHKLVISTGPEPP
TDIAFSAVTENSLTVSWTKPKTPISGFKVTYTHTDHGEPVSVTVDSGDSTLGLSQLSPGS
SYEVSIISILGLDESDPIKDSVMTLPDPPKDLRAVNVTDTKALLLWRPALAAVDKYAIVY
GSGTDAELRITVSGNAAEQQLSGLDGSTTYTVTISSLLGSTESSGASTSFTTTGGSGRGG
GGPSDLQANDVTPRTALLSWKPPLTPTVGYRLTYQTEGQGPKEVVVDASVTEYNLTRLQP
GSKYVVQLQAGAGGRYTAPISTHFTTGTLKFPFPSDCSQELLNGIRTSGEVEIFPHGKLG
TPMMVYCDMETDGGGWTVFQRRTDGSVDFFRGWKDYTKGFGSLSGEFWLGLENLYNLTAM
TPMSLRVDLRDKGDAVFAKYSTFELIKRNYKLSVGGYSGTAGGRTRGSAGVWFQNARAKL
RRSLTADDSQVNSPSAPYRGVTVATGSPSYSPPDQSQPFSFNTSTIDQLQLSLLTAPLSS
PPASPGASQSAFFLDYDSQSAPGCVSSLEAFEDFGEAGGGPEGDVDSDSSHRRHYC
NT seq
7731 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctccgtccttgtccttgtcctggtcctggtcctggctgctccggtcctcctg
accccgtcggcctcccaccagttacaggtcagaggtcaaagggcacccagggacaccagg
caggactccatcaaggtggtgatctcagaaggctgcgtcactcagggggagtcgtccgat
gtcacccggggaggtaaagagatcgacctgacccccggatcccctctgatcctgacccat
aagatcaacctggtcccgtcgggttcggggtccgggtcttgtggttgcgaggcggacctc
gccgccctgcgtgagcgcctcgagaggctggagagggaggtgtcgtccctcagggagaag
tgtggaggacctgagggaggctgctgcacctccaaggagagcaaagcatttctgatagac
catctccagaaaggagaccacctgcttcttcccctctgcacaccattcaccccgaggtta
cagatcccatttatctcacctgccaaggagcaaaagaatgtgccagggagatggtttacg
ttgggtccggtcatgccgtcctcacactggctgcagtccgctccggtgaaccctcgccgg
cagacgcagcgccctttgacgcaccgccccttgttgttgcagttaccgggacaacctttg
gcggcgcagtccggcccggcaaagcccacgtcgcaggcgcacaccccgttcacgcacttc
ccgcggttgctgcagctgttgggacaagctttgccggagcagtccggtccgctgaatcca
tcgtcgcacacacactctccgtcgatacagcgccccctgctgttgcagttcccagaacag
gcggtctcggcgcagtcctcaccggtgaagccgctgtggcacacgcatttgccgtccaca
caccttccgcggtcgccgcagtcgttaaggcaagatctttcagagcagtccggtccgctg
aatccatcgtcgcacacacacgctccgtcgatacagcgccccctgctgttgcagttgcca
ggacaggcggtctcggagcagtccgcaccggtgaagccgctgtggcacacgcatttgccg
ttaacacacttcccgcggttgttgcagtcatccggacaggccttcttctttgagcagtcc
ttgccggtgaacccaggttggcacacgcactctccgttgacgcagcgccccctgctgttg
cagttgccaggacaggcggtctcggagcaatcggcgccggtgaagccgctgtggcacaag
catttgccgttaacgcacttcccttggttgttgcagtcctccggacaggccttccttgag
cagtctggaccggagaacccaggttggcacacgcactctccgtcgatacagcgccccctg
ctgttgcagttgccaggacaggcggtctcggagcagtccgcgccggtgaaaccgctgtcg
cacacgcatttcccgtccacgcacctgccgcggtccaagcagtcatttgggcaaattctt
tcagagcaatcgggaccgctgaatccatcgtcgcacacacactctccgtcgacacagcgc
cccctgctgttgcagtttccaggacaggcggtctcggagcactctgcaccggtgaagccg
ctgtggcacacgcatttcccgtccacgcacctgccgtggttgctgcagccgtcggggcag
cctctgcgcgagcagtcgggaccggtgaagccggggtcgcacagacaccgtccgtccacg
caccggccgctgtcgttgcagtttccgggacagctggtccggctgcagtcgggtccgctg
aaaccggagaagcagacgcacttaccgtccacgcagcgtccctggtcgctgcactcgttg
ggacactcgtccatctcaggcttgatggagcagcctgcacctgaagcagaagggacagac
gcgttaaacaagggagacgacacacagagacacgtcttactcccgctacccctcatcttg
tcctacggggtcctagagacccctcctgcagtcccgctacccctcatctcgtcttacccg
gtcccagagacctctcctgcagtcccactacccctcatctcgtcttacccggtcccagag
acctctcctgcagttgaacgtgttcccactacccctcatctcgtcttacccagtcccaga
gacctctcctgcaagacctctcctgcaatcccactactcctcatctcgtcctacggggtc
ctagagacccctcctgcaatcccactactcctcatctcgtcttacccggtcccagagacc
tctcctgcaatcccactacccctcatctcgtcctacggggtcctagagacccctcctaca
gtcccactacccctcatcttgtcctacaggaaggagagtgacccgcagatccgcgtgcag
gtggagggcggcctgaccagctacacccagacgggcctggcagccggtcaggattacacc
gccagcgtcaccggggaggtcggcggcaagaggggggccgagacctccgccgagttcagc
accctcatctttggtcccaccaaccttcgagtcgtcaagacgacctcgacgtctgcggtg
gtccaatgggagccgtcccagggtgagatcgaccggtaccgtttgaccgtcgcgcccaac
gacggatcggggaagagtcaggaaatgacggtcccagccggccaggactccgcccacctc
cagcagctggtggcggggcgtgtgtacgacatcaccctggtggcggagaagggcgcgagt
cagagcaaaccggcaaccactcaggccactccagggaagacgttaccaagggttgccatg
gcagcttcaaccatgcaggtcccactagcacctggacaaaatatcagcgatggagaccaa
gagttgaacccagcgcttgaagtctttgaccaacagagtagtagggaggatgggagcgag
tccgatggaccgaatagacactccacgagctctgtgactgcgagaactaaacctctgttc
agcagaaagatgccggtgaatggcaccaagctcaaagttgctgaaaggcccacgttgtac
aggaaacccaacggcactctccggtttaacacaaccagagttgtgcctgggtggcgaaac
gttggccaaggatctttgagaaagtccccagtggggcagaagaagaaagaaccaatgtta
cccaaaaaacctaaaccaggtgtccccacgagcgaaggcaggacaacagctttgcatgaa
agagatccgagtgtagacgcattgagcaccaggaggaggcatgatgagaacaaagctttg
tctgcagtgtctgggaccgattcagatacatacagacaaagtagctcggaggaaccaatt
gttggcgtcgactccgaaaggcaaccagatgttggcgtggcaggccaagaaaaccacact
gctccagtgtctccagggccaactgggaccgttcaaagccaagagaagaaatgtatgaat
aaagtcaaagtgacgcacatcagattaccccatcagggcagaggcagcgggtgtaaaggg
gatggcacagagctggtaagaaagacagcgggttcagatcaaggctcctccgaaaccgat
gatttgaaaccctcgtctgcagagacggacctcgattacacaccaggtcctttacataaa
ctactgaaggacacttttgacggtttgaatatcaagacgttttctgttcacctgtccgaa
ccatcaaacctttctcttgatgcagaaacagtgaggaagcagatcataagtggactcaag
ccattgccaccatccttttcctggtcatcatcatcttcttcatcaaccttacaatccccc
tcacgttcatcagctaaaccaacatcctcctcagtgccatcatccccatcttcgttagca
tcaccttcacttgctccatcttcatcaacagcgccatcatcactaacatggtcaatggcg
tcaccctctactttaccgtcccctccatcatcatcctccctttccagctcagataaatca
ggttcagttggaagcaatgaaccagatgtggataacagccaaagtgcgactgatgttaaa
tcacctgaagacatgaaactaacgtcctcagaaaaaggtggcgtacatcttttccagcgc
acgccgtcgaaacacgggtacgtacgtcgcccgggtccaaacgctggactatttcagaac
aaaacacgtctaaatctgagacttcctcaccatttgactcctcgtttgaatctcatccct
agaagagagacggagaccggtcctacgtctacaaatgaattgtcttcttcaccgtcttca
tctgatttagaggattcttccacagttgatgtaagcgcatccctgaggaatacgagtgga
gacaaagatggcgcaactaaaccctcatcctctggagttcaacaaaaccaggaaaagatg
ccaacagaaagaggacgattcccagttcgccgttttcctggatacttgcatcgtccaaac
ttgggaccactacagaacaagacccgtccaaattcgagccagctgcctcccccctctcgg
cctttgaatcctgcatcagaaacaaggagacagcatgtatcttccactgaagcaacagtc
actttatcttctgttgccaaagaatcccattcagctgaaggtacagcgccaaaggaaggg
gagaatgaagacagagttgtgacaagcatgtccactaagttcaaccagaccctcagaaga
agtgaagcgttttccacccatcgcccaactaccaaagctatggggtcaaaggggacttat
ttccgtcggtcgcagctgtctgatggacgttcccaaaacaaaacccggacaaacttaaga
ccacctcaacatccacatagaggtcccatgcgcaagccttccccagccagaaagcaaact
ggaggcattactgttggaagtcaaattagccatttagaaaaggatagcacccttgaaatc
ccagatgaccaatcaggagggcaggatgccctcatgcctcctcaaggagtccaaattaga
cgattaggtgagcaaggccaagacactgccgtcagaccacagactaacaaattagaagag
ggggacggtgccccaatccaaactaccagatctggggaagaagagacaagcaccctagat
tcaaaagctgactctgacacccacaaagatggagtcaatgctggcaaacatcctggagct
acaagtcgaggtaaaccaactcttaaacaaacatctgattcaagacatggagacccaaga
tctgtcaaacttccaaagagacaaccacctacaccaacaagaagtatgaccgcacagaat
cccacccggataagacacccccacaacggtgggaacacaaggacagaggacaaaaccaga
aatattgcaaaaaagttgtttgagagtaaaactgagagtattgattctcaacttcagatg
ggatcagatggtccttcttcgatagtcacaagggaacctctggactatgtgggagtgaca
aaccggacatcagatggatttacgctcgtgtgggactcacccgaagacaagtacaaaaac
tttgttgtcacaagcaaagacattgggaaagacgaaggcccaaaaaaggacagcaagaaa
gatcaagaagaagaagaacaagaagtctcaaggaaggaggcaaaagatcatgaagaagaa
caagaagacttgaggaaagaggcaaaagatcatgaagaagaacaagaagacttgaggaaa
gaggcaaaagatcaggaagaagaaaaagaagatttaaggaaagagggtggcaatgaagag
gaggaagttacgcaacaaccaaccaaagaaactcattcagaaaatggaagcagtgaacat
gaaaacaaagtacctgaaagcgtctccatgccagttccaaggatccaaagtggctcaaca
gccaaacccgtagcaggaactgacaacaccttcaaaaaagttatttctggttcatctcgc
tcgttccagtttgagaatctgcctcctcagaccgagtacaccgtgaccttgcttggaaag
ggtcctggtcttctctccagactgcacaagcttgtcatcagtacaggcccggagcctccg
accgacatcgccttcagcgcggtgacagaaaactctctgacggtgtcgtggaccaaaccc
aagacccccatcagtggttttaaggtcacctacacccacacagaccacggtgagccggtg
tctgtgaccgtggactcgggcgactccaccctcggcctatcacagctctcgcctggttct
tcctacgaggtcagcatcatctccatcctcggattggacgagagcgatccaatcaaagac
tctgtcatgacactccccgacccgcccaaagacctccgggccgtgaacgtcacagacacc
aaggccttgttgctatggcgtccagcgctggccgccgtcgataaatacgccatcgtctac
ggctcggggacagacgcagagttgaggatcacggtgtctggaaacgcggcggagcagcag
ctcagcggcctggacggctccaccacctacaccgtcaccatcagcagcctgctgggcagc
accgagagctcgggggcctccaccagcttcaccaccaccgggggctctgggagagggggg
ggcggtcccagcgatctccaggccaacgacgtgaccccccgcaccgctctgttgtcatgg
aaaccacccttaaccccgacggtcggctacagactgacctatcagaccgaaggtcaaggg
ccaaaggaagtggttgtggacgcctcggtaaccgagtacaacctgaccagactccagccc
gggtccaagtacgtggtgcagctgcaggcgggggcgggggggcgctacacggcgcccatc
tccacccacttcaccaccggcaccctgaagttccccttcccctctgattgctcccaggag
ctgctgaacggcatcaggacctccggcgaggtggagatcttccctcatggaaaactcggg
acgccgatgatggtttactgcgacatggagacggatgggggaggctggacggtcttccag
aggaggacggacggctcagtggacttctttagagggtggaaggactacactaaaggattt
ggtagtctgagtggagagttctggctgggcctggagaacctgtacaacctgacggcgatg
acccccatgagtctacgcgtggacctgcgagacaaaggtgacgcggtgttcgccaagtac
tcgaccttcgagctgataaagaggaactacaaactgagcgtgggcggatacagcggcacc
gcaggtgggaggacacgaggctcggctggcgtgtggtttcaaaacgctcgggccaaactg
agacgctccctcaccgccgacgactctcaggtcaactcgccctccgctccctacagaggc
gtaaccgtggcaaccggctccccatcttactccccgcccgaccaatcacagcccttctct
ttcaacaccagcaccatcgaccagctgcagctctccctgctcaccgccccgctcagctcc
ccgccggcgagcccgggcgccagccaatcggccttcttcctggactacgattcccagagt
gcaccagggtgtgtctcctctctggaggccttcgaggactttggagaggcaggaggagga
ccagagggagatgttgattctgatagttctcatagacggcattactgctaa
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integrated database retrieval system
