Etheostoma cragini (Arkansas darter): 117957284
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Entry
117957284 CDS
T07493
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117957284 (atxn1a)
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GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
117957284
NCBI-ProteinID:
XP_034748814
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Position
14:13866439..13945266
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AA seq
813 aa
AA seq
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MKSNQERSNECLPPKKREIPSSTLPSDIRSPIIPPSSDSQRTENMAWLASVAGGNESDLG
GRRSSSQSDSLQYKSLFSTSDSSSSSSSLRLVSSLPTVYTSPLSQSTVGGTVHYAQLPPN
LQFIAPYAGYISPQLLPPPPPPPPFSSSSSSLAAQRQSHTETVSAPSHASKNDQQRASTG
RTSMPPPSTDPAPHHVQMSTSTRTVPSLHYQGGIHLPPQSLHPHHTLGHGMSQLVVQYTD
APTRKEEVGSRPRELHNGELERDRRFGASPESNLSKPGSKSRDATSSLSSYEGRQLVLHS
DFSTHDPSGLRTSFMLMPNSHHDHQLVPPRASPDNQTSSAHLEKGGIILGKPVNRAPSSS
NITSSFTFSPPLSVDSLKAAVSTLSPQTVIQTTHSATEALSMGLPSASIYHQPPIIGYIA
GGGGSQHTPISYHTSLQQHLLIPGTQPVIIPVSGGGVTTLEPVTSHITSSAQATPFPTTL
PHTYIAATAPKGETREAPSSSYHQAASGAVVQAQLHLPIVSAPPGLVAPSAPPSLSSTVA
PPSLPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISTELKIDSSTVERIEGSHTSPN
FAVVQFSVGEHRAQVSVEVLAEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSVGDVCISL
TLKNLRNGSLKKTLELATPASVPASSYGHLKPPRAAPDAPQSCSGGGSRHSERENGISHR
GRGGSGNRSGGGTNVENGDLVFGVRGSVSKGQVASSAEAGVTKPSGRRKRRWSAPEGRKV
ERFEEEPPLTLPKPSFISREMKVSIEGRSSIGK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggaacgcagcaatgaatgtctgcccccaaagaagagggagatcccc
tccagcacattaccatctgacattcgctcacccatcatcccaccttccagtgacagccag
cgcacagagaacatggcctggcttgccagtgtggctggtggaaatgagagtgacttgggt
ggacgccggagctccagtcagtctgacagcctccagtataaatcgctcttttccacatca
gactcttcatcctcctcttcctcattgaggctagtctcatctcttcctaccgtgtatacg
tcccccctgtcacagtccacagttggaggaactgtccattatgcccaactgcctcccaac
ctgcagttcatagccccatacgcaggctacatctcccctcaactgcttccacctcctcct
ccacctccccccttctcctcctcgtcctcctctttggccgcacagcgacagtcgcacaca
gagacagtctctgctccgtcacacgcctccaaaaacgaccagcagagagcatccactggg
cgtacctccatgcctccgccttctacagaccccgcccctcaccacgttcaaatgtcaacc
tcaacacggactgtgccgtcgcttcattaccaaggaggcattcaccttcctccccagtct
ctacacccccaccatactttgggacatgggatgtcccagcttgttgttcagtatacggac
gcacccactaggaaagaggaagttggctccagacccagagagctccacaatggagagctg
gaaagggatcggcggtttggagcatcccctgagtctaacctctctaagccagggagcaaa
tcacgtgatgccacttcgtctttgtcctcctacgagggccgccagctggttctgcactca
gacttctctactcacgatccctcagggctgagaacctctttcatgctaatgcccaacagc
catcatgaccaccagctggtaccacccagagctagccctgacaatcagacaagctctgca
caccttgagaaaggtggcatcatcctgggcaagcctgtcaatcgcgcaccctcgtcctcc
aacatcacctcctctttcacattttctcccccattaagtgtcgacagcctgaaagccgct
gtcagcacactgtcaccccagaccgttatccagaccacccacagcgctacagaggcactg
tcgatggggctcccctccgccagtatctaccatcagccacctatcattggttacattgca
gggggtggtgggagccagcatacgccaattagctaccacaccagcctacaacaacactta
ctcattcctggcacccaaccggtaattatccctgttagtggagggggagtcaccacattg
gaacctgtaacttcccacataacatcatctgcccaagccacaccgtttcctaccacactc
ccacacacatacattgctgccactgctcccaaaggagaaactcgagaagcccccagcagc
tcatatcaccaggccgcttcaggggcagttgtccaagcccagcttcatctccctattgtt
tccgctcctccagggctggtcgctccttctgctcctccctccttatccagtacagtggcg
cccccctcgctccccccatatttcatcaagggctccatcatccagctggcagatggggag
ctgaaacgcgtggaggacctgaagactgaggacttcattcagagcgctgagatcagcacc
gagctgaagattgactcgtccacagtggagcgcattgaagggagccacacctcacccaac
tttgctgtggttcagttctctgttggtgagcaccgtgctcaggtgagtgtggaagtcttg
gcggagtaccccttcttcgtcttcggccaaggctggtcttcatgctgcccagaccggacc
acccagcttctggagctgccttgcaccaagctctctgtgggcgatgtgtgtatttcactc
accctcaagaatctgaggaacggatctctaaagaagactctggagttggccacccctgcc
tccgtcccagcgtccagctacgggcacctcaaaccccccagagctgctccagacgctccc
caaagctgcagtggaggaggctccaggcacagtgagcgggagaatggcatcagccatcga
gggaggggtggaagtgggaatagaagtggaggaggcaccaatgtggaaaacggggatctc
gtgtttggggtaagagggtccgtttctaaaggtcaggttgccagcagcgccgaagctgga
gtcactaagccatcaggacgaaggaagcggagatggtccgcccctgaaggacgaaaagta
gaaagatttgaggaggagccgcccttgaccctgcccaaaccttccttcatctctcgtgag
atgaaagtcagcatcgagggaaggtcaagtattggcaagtga
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