Etheostoma cragini (Arkansas darter): 117957406
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Entry
117957406 CDS
T07493
Name
(RefSeq) transportin-2-like isoform X1
KO
K18727
transportin-2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117957406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117957406
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117957406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
IBN_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_EF3_N
Arm
Cnd1
PDS5
Adaptin_N
MMS19_C
Dopey_N
UNC45-central
INTS7_N
TPR_TTI1_C
RTP1_C1
DUF2573
Motif
Other DBs
NCBI-GeneID:
117957406
NCBI-ProteinID:
XP_034748990
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All DBs
Position
15:complement(7348717..7362446)
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AA seq
889 aa
AA seq
DB search
MEWQPDEQGLQQVLQLLKDSQSPNTVTQRAVQQKLEQLNQFPDFNNYLIFVLTRLKTEDE
PTRSLSGLILKNNVKAHYQNFPSTVADFIKQECLNNIGDPSPLIRATIGILITTIASKGE
LQTWPELLPQLCNLLNSDDYNTCEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMENIDTFIESLFALAADEDSEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDPDENVALEACEFWLTLAEQPICKEMLSGHLAQLTP
ILVNGMKYSEIDIILLKGDVEEDEAVPDSDQDIKPRFHKSRTVTLQHEGGDGEEGEDIED
DDDDDDDTLSDWNLRKCSAAALDVLANVFRDELLPHLLPLLKGLLFHPDWVIKESGILVL
GAIAEGCMQGMVPYLPELIPHLIQCLCDKKALVRSIACWTLSRYAHWVVSQPPDSYLKPL
MTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIQKLMPPLIAKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKTLAQAMMYNQHPDQYEAPDKDFMIVALDLLSGLAEGLGGHVEQ
LVARSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFLHVKPCIAEFMPILGLNLNPEF
ISVCNNATWAIGEISMQMGAEMQPYVGMVLPHLVEIINRPNTPKTLLENTAITIGRLGYV
CPQEVAPQLQQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPAGVVQDFIFFCDAVAS
WVNPNDDLRDMFYKILHGFKDQVGEDNWQQFSEQFPPLLKERLSACYGV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcagccagatgagcagggacttcagcaggtcctccaactgctcaaagactcg
cagtcgcccaacacagtaacacagagggcggtccaacaaaaacttgaacaactcaaccaa
ttcccagacttcaacaactatctcatctttgttctcacacgactcaaaactgaagacgag
ccaactcgctctctgagcggtctgatactgaagaacaatgttaaggcccactaccagaat
ttcccctcaactgttgctgacttcatcaagcaggaatgtctcaacaacattggtgacccc
tcaccgctcatccgtgctactattggcatcctgattactacaattgcctccaagggagag
ctacaaacatggcctgagctgctgccccagctctgcaacttgctcaactccgatgactac
aacacctgcgagggctcgtttggagcactgcagaagatctgcgaggactcctcggagctg
ctggacagtgatgctctgaacaggcctctcaacattatgataccaaaattcctccagttc
ttcaagcactgcagccccaagattaggtcccatgccatcgcctgtgtgaaccagtttatc
attggccgagcccaggccctaatggaaaacattgacaccttcatagagagtctgtttgcg
ctggcagcagatgaggactctgaggttcgaaagaacgtctgcagagccctggtcatgttg
ctggaggtccgcattgaccgcctcatcccccacatgcacagcatcatccagtacatgctg
cagaggacccaggaccccgatgagaacgtggctctggaggcgtgtgagttttggctgact
ttagcggagcaacccatctgtaaggagatgctatctggacacctggcgcaactgacacct
atcttggtaaatgggatgaagtattcagagatagacatcatactattaaagggtgatgtg
gaggaggatgaggcagtaccagatagcgatcaggacatcaagccccgtttccacaagtcg
cgcactgtaactctgcagcatgaaggaggagatggggaagagggcgaggacattgaagat
gacgatgacgatgatgacgacacactgtcagactggaacctgcgaaagtgttcagctgca
gccttggacgtgctggccaacgtgtttcgtgacgagctgctgccccacctcctgccgctc
ctgaaaggcctgctcttccaccccgactgggtcatcaaggagtctggtatcctggttttg
ggggcaatagctgagggttgcatgcagggcatggtgccctacctaccagagctgattccc
caccttatccagtgtctctgcgacaaaaaggccttggtgcgctccattgcctgctggacc
ctgagtcgctatgcacattgggtggtctcccagccccccgactcctacctcaaacccctt
atgacagagcttcttaaacgcatcctggatggcaacaagagggtgcaagaagccgcttgc
agtgcgtttgctaccctagaagaggaggcgtgcacagagctggtaccctacctgagtttt
atcctggacacactggtgtttgcttttgggaagtaccagcacaagaatctccttattctc
tacgatgccataggaactctagcagactcagtgggtcaccacctcaatcagcctgagtac
attcagaagttgatgcccccccttattgccaagtggaatgagctgaaagatgaagacaag
gatctctttccactactagagtgtctgtcgtcagtagcaaccgccctgcagagtgggttt
ctgccttactgtgagcctgtctatcagcgatgtgtcacactagtccagaagacactagct
caggctatgatgtacaaccagcatccagaccagtacgaggctcctgacaaggattttatg
attgtggccttggatctgctgagcggcctggctgagggtttgggtggtcatgtggaacag
ctagtggcccgctcaaacatcatgaccctgcttttccagtgcatgcaggatactatgcct
gaggtgaggcaaagctcctttgctctgctgggtgatctaaccaaggcgtgtttcctccat
gttaagccctgcattgctgagttcatgcccatcctggggctcaacctgaacccagagttt
atttcagtgtgtaacaatgccacctgggccattggcgagatctccatgcaaatgggtgca
gagatgcagccgtatgtgggaatggtgctgccacacctagttgagatcatcaatagaccc
aacacgcccaagactctgctggaaaacacagccattacgattggcagactgggttatgtc
tgtccccaggaggtggcaccacagctgcagcaattcattagaccatggtgcacatcgttg
aggaatatacgagataacgaggagaaagactccgcctttaggggaatctgtgtgatgatt
ggtgtcaaccctgcaggagtggtgcaggatttcatattcttctgcgacgctgtggcctcc
tgggtcaaccccaacgacgacctgagagacatgttttacaagatcttgcacggctttaag
gatcaggtaggggaagacaactggcagcaattctcggagcagttccctcctctgttaaag
gagcgcctatcggcctgctacggcgtctaa
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