Etheostoma cragini (Arkansas darter): 117957426
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Entry
117957426 CDS
T07493
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03320
PPAR signaling pathway
ecra04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117957426 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
117957426 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ecra01004
]
117957426 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117957426 (slc27a1a)
Lipid biosynthesis proteins [BR:
ecra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117957426 (slc27a1a)
Transporters [BR:
ecra02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
117957426 (slc27a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
117957426
NCBI-ProteinID:
XP_034749033
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All DBs
Position
15:11632809..11639389
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AA seq
649 aa
AA seq
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MHNAASVSASLGSMGLLRLFGVSWSWSLAAGLGMYLGTRSWKYFYIAARTAKRDIIGLYV
LLRVKMALWRYMRNGSNIPSIFAQTVKRHPNKPALIYEATGETWTFSQLDELSNAVAHWA
RGQGWVSGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRHDSLLHCIGVSGSRAIV
FGAELADAMLEISSSISQSMVRFSTGGDLSAEHQARLVAQALDPILASSPRHPPSPCVPP
KGMNDRLFYIYTSGTTGMPKAAIVVHSRYYRIAAFGYFAFRMSPVDIIYDCLPLYHSAGN
IMGVGQCLIHGLTVVVKKKFSASRFWEDCIKYNCTVVQYIGEICRYLLSQPVRPSEKEHK
VRLAVGNGLRPSVWEAFTERFRVAQIGEFYGATECNCSIANMDGKVGACGFNSRILPNVY
PIRLVMVDEDSMELVRDSRGLCVPCRPGEPGLLVGRINQQDPLRRFDGYANQDATRKKIA
NNVFKKNDSAYLSGDVLVMDDMGYMYFRDRGGDTFRWRGENVSTTEVEGVLSSLLGQTDV
AVYGVAVPGVEGKAGMAAIADTTGSFDCKGFLQKVQHALPSYARPVFLRISPHVDTTGTF
KIQKTRLQSEGYDPRLTTDQIYFLNTRAASYEAVDEELYNAIVEGRMSL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgcggcgagtgtctcagcctctctggggtccatgggactattgcgtctcttt
ggggtgtcctggtcctggagtctagcagcaggccttggaatgtatttgggcacgagaagc
tggaaatacttctacattgcagcacgcaccgccaagagagacatcattggcctgtatgtg
ctgttgagagtgaagatggctttatggcgctacatgcgcaatggaagtaacattccttcc
atattcgcccagacagtaaaacggcatccaaataaaccagcactgatctatgaggcaaca
ggggaaacgtggacgttcagccagctggacgagttgtctaatgcagtggcccactgggca
agaggtcagggttgggtctcaggggatgtggtggccctcttcatggaaagcaggcctcta
caggtggcgctttggctgggcttggccaaggtcggggttgaagctgcacttatcaacttc
aacctccgccatgattccctcctgcactgtatcggggtgtcggggtcacgggccattgtg
ttcggagctgagcttgctgatgccatgctggagatcagttcctccatcagccagtccatg
gtacggtttagcacaggaggagacctcagtgcagaacatcaggcccgactggttgctcaa
gcgcttgacccaattctagcctcttcgcctagacatccaccttcaccttgtgttcccccc
aaaggcatgaacgaccgcctattttatatttacacatctggcaccacaggaatgcccaag
gctgccatcgtggtacacagtcgttactacagaattgctgcttttgggtatttcgccttt
cgcatgagtcctgttgacatcatctatgactgcctgccactctatcactcagcaggtaat
atcatgggagtcggtcagtgtctgatccatgggctcactgtggtagtgaagaagaaattc
tctgccagccgcttctgggaagactgcattaagtacaactgcactgtggtgcagtatatc
ggggaaatctgccgctacctgttgtctcagccagtacggccgtcagaaaaagagcacaaa
gttcggctggcggtggggaatgggctacggcccagtgtgtgggaggccttcacggagcgt
tttagggtggcgcagattggcgagttctatggagctactgagtgcaactgcagcattgcc
aacatggatggcaaggtgggcgcctgtggattcaacagtcgcattctccccaacgtgtac
ccaatccggctggtgatggtggacgaggacagcatggagttggttcgtgacagccggggg
ctctgtgtgccttgccgccccggggagccagggcttctggtgggccgcatcaaccaacag
gacccattacggcgttttgatggctacgctaaccaggatgctacaaggaagaaaatagct
aacaatgtgttcaagaaaaatgattctgcatatttatcaggtgacgtgctggtgatggat
gacatgggctacatgtacttccgtgaccgcggcggagacacgttccgctggcgaggagaa
aatgtctccaccaccgaggtggagggggtactcagcagtctactgggtcagactgatgtg
gctgtgtatggcgtggcagtgccaggtgtggaaggtaaggcaggcatggctgctattgca
gacactacagggagttttgactgcaaaggtttcttgcagaaagtccagcatgctcttccc
tcttatgctcgccccgtgtttctgcgaatctccccacatgtggacaccacaggtacattt
aaaatccagaaaaccaggctgcagagtgagggatatgacccacgtctcaccactgaccag
atctattttttgaacactagagccgcttcttatgaggctgtagacgaggagctatacaac
gccatagtggagggaagaatgtctctatga
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