Etheostoma cragini (Arkansas darter): 117957527
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Entry
117957527 CDS
T07493
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
ecra03015
mRNA surveillance pathway
ecra03040
Spliceosome
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117957527 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
117957527 (alyref)
03015 mRNA surveillance pathway
117957527 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117957527 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117957527 (alyref)
03041 Spliceosome [BR:
ecra03041
]
117957527 (alyref)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117957527 (alyref)
TREX complex
117957527 (alyref)
Spliceosome [BR:
ecra03041
]
Complex C
Other components
EJC/TREX
117957527 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117957527 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
117957527
NCBI-ProteinID:
XP_034749229
LinkDB
All DBs
Position
15:5966559..5969598
Genome browser
AA seq
272 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQQRGGGRGGRGRGRGGSGGGRGGGGPGRLGVSGGGFAGRGASG
PMRSRQNLSRARGRPTPYSRPKQLPDKWQHDMFDNGFSGFSGPVGGGGGAGVETGGKLLV
SNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIP
LDGRPMNIQLVTSQIDTQRRPMQGLNRGGGGGMNRNRGGGFRGMQRGRGGRGAGGAGGRG
RGGRGGSGSKQQLSAEELDAQLDAYNARMDTS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaatggatatgtctctagacgacattattaagcagaacaggcagcagaga
ggtggaggccgcggtggaagaggtcgaggccgcggaggctcaggcggaggccgaggagga
ggaggccctgggcgtcttggagtcagcggcggaggatttgcaggccgcggcgcatccggc
cccatgaggagccgacagaatctgagccgcgctagaggcagaccaacgccttacagcagg
cctaaacagcttccagataagtggcagcatgacatgtttgacaacggcttcagtggcttc
agtggccctgtcggagggggcggaggagctggtgtggaaactggagggaagctccttgtc
tccaatctcgactttggggtgtcagatgcagacattcaggaactttttgctgaatttggg
actctgaaaaaagctgcagttcactacgaccgatcagggaggagcctgggaaccgccgat
gtccactttgaaagaagggcagatgcccttaaggccatgaaacagtacaatggcatccca
cttgatggacgtcccatgaacatacagcttgttacatcacagattgacacacagaggcga
cctatgcagggtctgaacagaggtggtggaggaggcatgaaccgaaatcgtgggggtggc
ttcagaggcatgcagagaggccgtggaggacgtggtgcaggcggcgccgggggaagaggt
cggggtggccgcgggggtagtggtagcaagcaacagctgtcagcagaagaactcgacgcc
cagttagatgcctacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system
