Etheostoma cragini (Arkansas darter): 117957554
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Entry
117957554 CDS
T07493
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117957554 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117957554 (nup85)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117957554 (nup85)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117957554 (nup85)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117957554 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
117957554
NCBI-ProteinID:
XP_034749255
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Position
15:7639357..7646929
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AA seq
652 aa
AA seq
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MEELDVEPAITNIPAASDGKHLGFAWGPGDILAYETLYMPSSAKGSGCSFIHEVRKDEDI
YSPILRKLFNESHHIFVGLQTIREDLPSKNKKTQFVSISKNYRSVIRACMEELQQVAVST
KVAKVATQYGNQVSILLAIELIWNLCEVLFIDAAPAGPLLLHLLDWVRLHKGDVDEKARE
VLQSESPAEHHDYWDVVVSYVLQGRFEEARQMLVKQAILQPAASNMYKLMDTLLSKMPFY
NPGGTQTLTEFDVKWRHWHEEVDRCLQDNSFASNQHLEIICKILVGDEDTLLEHKELLST
WYHFLVTRLLFCHPTVKPIELHYYAQSCMTMFLDLRSVPEPLDSILLAAFEFDIHQVIKD
CSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVDY
FDNCPEFGHVYLELQIERVPLETERKALKVLRICEQRQMSEQVRSICKIMAMRALRNNRL
GSALSWSIRAKDAAFATLISERFLQDYCARGTFSDLDLIDNLGPAMLLSDRLTFLVKYRE
FHKLYEEKRFSEAAKLLLSLITAKIAPQSFWMTLLTDALPLLEQKEVIFSADQTHELMFC
LEELTSSLNTTAPGTDRTMQDEDIEQTKVELLRLALARNLAMAIVKEGTVEA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttagatgttgagccggcaatcaccaacattcctgcagccagtgatgggaag
catttgggatttgcatggggtccaggtgatatccttgcgtatgagaccctttacatgcca
tcaagtgctaaaggatcaggctgctccttcatccatgaggtcagaaaagatgaagacatt
tattcccccattttacgcaaactcttcaatgagtcacatcacatctttgttggccttcag
acaattagagaggacctccccagcaagaacaaaaaaacccaatttgtcagcattagtaaa
aactatagatctgtgataagagcctgtatggaggagcttcagcaagttgcagtttctaca
aaagttgcaaaagtagccacgcaatatggaaatcaggtgtccattctgttagccatagaa
ctgatctggaatctgtgtgaagtgctgttcattgatgctgctcctgcgggtcccctgttg
ctccacctcctagactgggtacggttacacaagggtgatgtggatgagaaggccagagaa
gtgctgcaaagcgagagccctgctgagcaccacgactactgggatgtggtggtgagttat
gtgctgcagggcaggtttgaagaagccagacagatgctggtgaagcaggccatcctacag
cctgctgccagcaacatgtacaagctgatggacactcttctcagcaagatgcccttctac
aatcctggtggcacccagacgctgacagagtttgatgtgaagtggagacactggcatgag
gaggtggaccgctgcctgcaggacaactcgtttgccagcaaccaacatctggaaatcatc
tgcaagatcctagttggggatgaagacactttgctggagcacaaggagctactgagcacc
tggtaccacttcctggtcactagactgctcttctgccaccccacagttaaacccattgag
ttacactactatgcacagtcttgcatgacaatgtttctcgacttaaggagcgtcccagag
cccctggacagcatcttactggctgcctttgagtttgacatccatcaggtcatcaaggac
tgcagcattgctctcaacaactggtggtttgtggcccatttgacagatctgttggatcat
tgcaaactcctccagtctcacaatctacactttggctccaacttgagagagtttctgctg
ttagaatatgcttctggtctcttcactcatcacagtctgtggcagttggccgtggactat
tttgacaactgcccagagtttggccatgtctacctggagctgcagattgagcgcgtacct
ttagaaacggagcgcaaagccctcaaggtgctcaggatctgcgagcagaggcaaatgtcc
gagcaagtgcggagtatctgtaagatcatggccatgcgggccctgaggaacaacagactg
ggctccgctctctcctggagcatcagggccaaggatgctgcctttgccacactcatttca
gagaggtttctacaggattactgtgccagagggaccttctctgatttggacctgatagac
aacttgggtccagcaatgctgctcagcgacaggctcactttccttgtgaagtaccgtgag
ttccacaagctgtacgaagagaagcgcttcagtgaggcggccaagctgctcctctccctc
atcacggccaagatcgccccccaaagcttctggatgactctgctgactgacgccctgccg
ctgctggagcagaaagaggtgatcttctcagcagaccaaacccatgagctgatgttctgt
ttagaggagctcacttcctcattgaacaccacagctcccggcacagacaggaccatgcag
gatgaagacatagagcagaccaaagtggagctcctgagacttgctctggccaggaatctg
gctatggctatagtcaaagagggaactgtcgaagcatga
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