Etheostoma cragini (Arkansas darter): 117957559
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Entry
117957559 CDS
T07493
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
SAM_2
Ank_5
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
Motif
Other DBs
NCBI-GeneID:
117957559
NCBI-ProteinID:
XP_034749266
LinkDB
All DBs
Position
15:16769317..16851829
Genome browser
AA seq
2455 aa
AA seq
DB search
MTMPFSPLSSDEEQQRMLGNNRHLYPGAEDEEEEEEEEEEEMEEEERDEDQEEEENGELE
GEEEDDEEEMVEEVRRGGPSRGSRGEGHRQSGKLAGRPTRDRPVRPGNPGHATNPYSSNP
GPTHQQPANHIQQQQQRRLKERSTGTVPSEDTHIAMMVFRIGIPDIKQTKCLRFNPDATV
WKAKQQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERLLKEYPQSFEKGVPYLEFRY
KTRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMVKFLDKGLDPNFQDPDTGETA
LSLAVQCEPGAGETIRVLVEGGAHIDFRAKDGLTPLHKAVRGHRHTALLVLLSLGASPDY
KDRRGLTPLYHTVLTGGDTSCCETLLFHRAKLGIRDENGWDETHQACQHGNSQHLEHLLF
YGADSSSQNASGNTALHICALYNKESCSRILLYRGANKDTKNSSGQTPFQVAVMSGHFEL
GEIIKNHRDTDVVPFVESPKYAPQRRESTRTLTIPNPHPFLRANSDSSMNLPDWMAVPNA
PGTNIVSVQGYKHTGTLRSSSSPRGARTRSPSRGRIGEKEDRSRQSRRQGPVPASAAGQT
AGQRRRLYSAVPGRVFVATRSNSAQGEREISFSKGDRVKVLSVGEGGYWEGTVRGRTGWF
PSDCVEEVMLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSE
GFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVK
VGHRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLSTPAIALRSKSMTSE
LEEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTISTNEAPGTRGQ
GPKRDRGRSFYGNEPNYGDHSGMGMMSSGLGLGFDRGQYTSGHGPPHGMLRQKSIGVPEE
ERQYLHPPAMKFARSLSVPGPDEIPPPPTTAPPDPPFSSAPPLGWRAKSSQQPSVSVSQS
TSTSAHYQPYSQSVHFTHGGRERAGGPSTGPSDGAVDNTTSYAHAAAHTAQSRTASRKVA
YTGESVGGGIGASGGAKAAGLRRGYSTAVPPSSIATVMPQQQQSTQSQPQRADRSAAGAG
AGGPKGGARRGKGPLVKQSKVEDLRMAQGTLGGKGLVEKSSIPIPTIIVKAPSTSSSGRS
SQGSSVEADAPTSGETDEAKTPHGPPPSTPAPQPPSPPSIPAPPPPSLPSMRAQENLDFT
SQFGAAIVGAARRDRERFHEARRKSASLFMSVEEDVSLGGVSDGITRTQVSQQQQQLNTQ
GESSSTRLRPSKSIDEGMFSGDTFFHHTRSMPPAFGLPEYSTPALDYQPKSVPTDLYTAA
GRQPASSSTTTFIHPLTGKALDPTSPLGLALAARERALRDDSRLRRGTDHHFTRQMSSGM
FPSSTVTSQPVSSTAQSSSSSYLVTSSSLAATTATVGRPPSPRILRGVGSVWSEEGGGGE
REREGGGTREGLRVRFSEDKTVHTHHYQSQPYQPTYKERDRSRDRERELSRERERDKERE
GYMRRAEQAAANAAAAESSAQQASHSQQPRRPTFLRMESQADAYILSLTPPSPPPTSTQQ
TANTTGSTGTAIMVLPPPAPSVDVDDEFVYADPLPPPLQFANSFDRGLSGYSQHGMRPNS
LTSRQQQVPPPPPPPPPPPPPPPPPPPQKESFVSGFPAHTPLPSPQAGDSTASSLTSYDS
EVANLTQSATSPSQTSPNPLPPHSPSTLQPTSIAGPPPPPSVSPPPPPGSYHRPFSMSHP
HHLYNSSHTPGRSSPTPPPHTVAPPPAYRSHPAPSSTAATSAPLRGNASHATTASCAATT
TSAATTTNTSTQLYHERTHTTSSTAITGSRRTGEHHRPPPATKKGESQETVVDSGIEELD
SRSSSDHHLDSILASVRSDRLDRGERGGRMGGGTGEPERGGDFLESYMSYLDGQTFEMQN
ATAAASTYPKTNRFREGGRTSDLHRQTSTAPASFHSHRRREEQEEDEVEEGGDESGRDGY
GVRDMQNLGRPISPYFDRPRTPEMKPLWGEGQMAGDQSGSLLEGKKIYPPASSMKPSIIN
ELSSKLQQRTKDSWSSQRPLGRHRSRNRFSEDSASALSPPSARSLSPSPISLSQPSLSPS
PTPASQYPNWGRSPSPQPQPPAACQPPRSHSPLSPTSYAPYPTSPKHRPVYRTKALEFQF
IPSRDSRKAESHMFQRRRAPSPLISPSERPKLGPPRPSSLPLLPTTPLYSAMYDLRGSIT
PPSPGNPLGDPYFSPSPPLFAPSGAPPPPNSTLVVSRSLSPTHFLSGTSSPPLHPHPPPT
CLSYPHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNEIDGSHLPSLTK
DDYLDLGVTRVGHRMNIERALRTVMDRMSSSPFPISVLSPRDGQTERRRDDGSRS
NT seq
7368 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgccatttagtcccctgtccagcgacgaggaacaacaaaggatgctgggaaac
aatcgacatctttatccaggggcagaggacgaggaagaggaggaagaagaggaagaggaa
gaaatggaagaagaagagcgtgatgaggaccaggaggaggaggaaaatggcgagctggag
ggggaagaggaagacgatgaggaagagatggtggaggaggtcagacgaggcggcccgtca
cgggggagcaggggtgagggacacaggcagtcagggaaattggccggaagacccaccagg
gacagaccggtccggccaggtaaccccggacacgccacaaacccctattcgtccaatcct
ggacccacccaccaacagccagccaatcacatacagcagcagcaacagcggaggctgaag
gagcgcagcacaggcactgtgccttctgaggacacccacattgccatgatggtgtttcgc
atcggtatcccagacataaagcaaacgaaatgtttgcggtttaacccggatgccactgtg
tggaaggccaagcagcaggtgctctgctccctgaccgaatctcttcgggacgtcctgaac
tacggactgttccaacccgccacagacggccatgatgccaagttcctggaggaggagagg
cttctcaaagagtacccacagtcctttgagaaaggagtaccatatttagagtttcgatac
aagacccgggtatacaaacagaccaatctggatgagaagcaactggccaaactgcacact
aaggctagcctgaagaaattcatggattatatccaaaccagcgctgtggacaagatggtc
aagttcttagacaaaggactcgatcccaactttcaggaccctgacaccggcgaaactgct
ctgtccctggcggtgcagtgtgagccgggtgcaggcgagaccatccgggtcctggtggag
ggaggggctcacattgacttccgcgccaaagatggactcacacctttacacaaagctgta
cgaggccaccgccatacagccctgctggtcctgctgtctctgggtgcatccccggactac
aaggaccggcgagggctgacgccgctctatcacactgtgctgacagggggggacacctcc
tgctgcgaaacactgcttttccaccgcgccaaactgggcatcagggacgagaacggctgg
gacgagacacatcaggcctgtcagcatggtaactcgcagcatctggagcacctccttttc
tacggggcagattcttcctcccagaatgcctctggaaacactgccttgcacatctgtgct
ttatacaacaaggagagctgttcacgaattctgctctaccggggagcaaataaagacaca
aagaacagcagtgggcaaaccccctttcaggtggctgttatgtccggccattttgagctg
ggagaaattatcaaaaaccaccgggatacagatgtggttccctttgtggagtctccaaag
tacgccccccagaggcgggagagcacccggacactgacgatccccaaccctcatcctttc
ctccgggccaacagtgacagcagcatgaacctgccagactggatggcggtgccgaatgcc
ccagggaccaatattgtctctgtgcagggctacaaacacacaggaaccctgcgtagctcc
agcagtcccagaggggcgaggacgcgctccccgtcccggggaagaatcggagaaaaggag
gacaggagcaggcagagtcggagacaggggcccgtccctgccagtgcagctggacaaacc
gcaggccagcggagacgcctctacagcgctgtcccgggacgagtctttgtagctactcga
tcaaactctgcccaaggagagcgagaaatcagcttcagtaaaggagacagggtcaaagtg
ttgagtgttggcgagggcgggtactgggaggggacggtcaggggtcgcacgggctggttc
ccctcagactgtgtggaggaagtaatgcttcgaagccaagacaaccgatcagagagccgg
ggagaacgagccaaaaggctgttccgccattacactgtgggatcctatgacagctttgac
gctcccagtgactatataatcaaggagaagacagtgcttctgcagaaaaaagacagtgag
ggtttcggctttgtgttgagaggagccaaagctcagactcctatcgaggagttcaccccc
accccggctttccctgccctgcagtacctggagtcagtggacgagggaggcgtcgcctgg
agagccggtctcaggatgggggatttcctgatagaggtcaatggtcagaatgtggtgaag
gttggtcaccgacaggtcgtcaacatgatccgccaaggtggcaacagcctcatggtcaag
gttgtcatggtaacccgcaaccccgacatggaggagggttcgagaaagaaaatcccccag
cagagcaagaggctgagcactccggctatcgccctacgatccaaatccatgacttccgaa
ttggaggagatggtggagagagctgctaccccttggaaaaaaaaatcagaattcgaatcc
tcacaagttacagagaagaagaggacagtctatcagatggctttgaataaactagatgaa
attcttgcagcagctcagcagacaatcagcaccaacgaggcgcctgggacacggggacag
gggccaaaaagagacagggggcgaagtttctatggcaatgagccaaactacggggatcat
tccgggatggggatgatgtcgtctgggttgggcctcggcttcgaccgtggccagtacacc
tcaggtcacggccctccgcacggtatgctgcggcagaaatccatcggggtgcctgaggag
gagagacagtacctgcatcctccagccatgaagtttgctcgcagtctgtcggttcctggc
ccagacgaaatccctcctcctcccaccacagctccaccagacccaccattctcctctgct
ccgccactaggttggagagcaaagtcatcacagcagccctctgtctctgtttcacagtcc
acatccacctctgcgcactaccagccctactcccagtcagtgcacttcacacatgggggc
agggaaagggccggtggtcccagcacgggccccagtgacggagcggtggacaacacaacc
tcgtatgcacacgcagctgcccatactgctcaaagtaggactgcttcacggaaggttgcg
tatactggggagtctgttggagggggcataggtgctagtggaggggcaaaggctgcaggt
cttaggagaggctacagcaccgctgtccccccatccagcattgctactgtaatgccccag
caacaacagtctacccagagccaaccccagcgagcagaccgcagtgcagctggggctgga
gcaggcggtcctaaaggaggggcccggagaggcaagggccccctagtgaagcaatccaag
gtagaagacctgcgcatggcccagggtacactggggggcaaaggcttggtggagaaaagc
tccatccccataccaaccattattgtcaaggccccttcaaccagcagcagtggacgcagc
agccagggcagcagtgtggaggccgacgctcctacatcaggggagacagatgaagccaaa
acgcctcatggtcctcctccctccactcctgctccacagcccccttctcccccttccatc
ccagcgccgccgcctccatccttgccttctatgcgagcgcaggaaaatctggacttcacc
agccagtttggggctgccattgttggcgcagctcggcgagacagggaacggtttcatgaa
gcccgtagaaagagtgcctcgttgttcatgtctgttgaggaggatgtaagtcttgggggg
gtgagtgatggaataacaaggactcaagtgtcacaacaacaacaacagcttaacacacag
ggtgaaagttcatcaacacggcttcgcccgtccaagtctattgatgagggcatgttctct
ggggatacttttttccatcacacccgcagtatgcctccagcctttggcctgcctgagtac
tccacacctgccctggactatcagcctaagtctgtgcctactgacttgtacacagcagca
ggcaggcagccagcatcctccagtaccaccacattcattcaccctctaacaggaaaggct
cttgaccctacgtcgccactaggcctcgccctggctgccagagagcgtgctctaagggat
gacagcagattgaggaggggaacagatcaccactttacccgacagatgtcgagtgggatg
tttccttcatctactgtcacttctcagcctgtgtcgtcaaccgcccagtcctccagctct
tcttatctggtcacctcatcttctctggccgctaccacagccactgttggacgcccaccc
tcacccagaatcctcagaggagttgggagtgtgtggagtgaggaaggtggtggaggagag
agggagcgggaaggaggagggactcgtgaggggctaagagttcgcttctctgaggacaaa
acggtccacacacaccactaccagtctcagccgtatcagccaacctacaaggagcgggac
cggtcgagggatcgggagagggagctgtcaagagaaagagagagggacaaagagagagag
ggttacatgaggagggcagaacaggctgctgccaatgcggcagccgctgagagctctgct
cagcaggcgtcccattctcagcagcctcggaggcccacatttctcaggatggaaagtcaa
gctgatgcctatatcttgtccctcacccctccctctcctccacctaccagtactcagcag
acagcaaacactactgggagcactgggactgctataatggttcttcctcccccagccccc
tcagttgatgtggacgatgagtttgtctacgcagaccctctcccccctccactacagttt
gctaacagcttcgacaggggactatcagggtactcacaacacgggatgcgccccaacagc
ttgacatcccgccaacagcaggtcccaccccctccacctccacctccacctcctcctcca
ccaccaccccctccacccccacaaaaagaatcatttgtaagtgggtttcctgctcataca
cccctgccctcacctcaggcaggggactccactgcctccagcctcacatcttacgacagt
gaggtcgctaacctgactcagtccgctacgtccccctcccaaacgtcgcccaatcccctt
ccccctcactctccctctactctgcagcccacctcaatagcgggacctccgcctccccca
tcagtctcaccaccgcctcctcctggatcttatcacagacccttctctatgtcccacccc
caccacctctacaacagctctcacactcctgggcgctcttccccaacgcctcccccgcac
acagttgcgcctcccccggcctaccgtagtcacccagcgccctcttccactgctgccacc
tctgctccacttaggggcaatgcctcacatgccacgaccgctagctgtgccgctacaacc
acttctgctgccaccacaacaaacacctccactcagctctaccatgagcgtacacatacg
acatcctccaccgccatcactggcagtcgcaggacaggggagcaccatcgtcctcccccc
gctactaagaaaggagagtcccaagagactgtagtggactctgggattgaggaactggac
agccgcagcagcagtgaccaccacctcgacagcatcctggccagtgtccgcagtgacagg
ctggaccgaggggagagaggaggacggatgggaggtgggacaggggaaccagaaagggga
ggagattttctggagtcttacatgagctacctggacggacaaacttttgagatgcagaat
gccacagctgcagcctccacctatccaaaaaccaacaggttcagagagggaggtcgcacc
agtgatctacacagacaaaccagcactgctccagcatccttccactcacacagacgaaga
gaggagcaggaagaggatgaggtcgaggaaggaggggatgaaagtggccgggatgggtat
ggagtaagggacatgcaaaatttgggacgccctatttcaccgtactttgatcgccctcgc
actcctgagatgaagcctctatggggcgaggggcagatggccggtgaccagtctgggtca
cttttagaggggaaaaagatttaccctcctgcatccagtatgaagcccagcatcataaac
gagctgagcagcaaactgcagcaaagaaccaaggacagctggagcagccagagaccacta
ggaagacacagaagcagaaacagattttcagaagactcagcctcagctttgagccccccc
tcagctcgatccttgtcaccgtctccgatttcattatcgcaaccatcgttatccccgtcc
ccaacccctgcctctcagtaccccaactggggacgatccccatctcctcaacctcaacct
ccagctgcctgtcagcctccacgttcacattccccattgtctccgacatcttatgcccca
taccccacttcccccaaacacagacctgtctaccggaccaaagcccttgaattccagttc
atccctagtcgtgactcccgtaaagcagaatcacacatgttccagcgtaggcgagcaccc
agccccctcatctccccgtcagagaggccaaagctaggtcccccccggccatcatccctt
ccgctcctccccaccacacctctgtacagtgccatgtatgacctccgaggttcaatcacc
ccgccatcacctgggaaccctcttggagatccttacttctcgccctctcctcccctgttt
gccccctctggtgcccctcctcctccaaactctactttagttgtctctcgatccctctct
ccaactcatttcctgtccgggacctcttctccgcccctgcaccctcaccctccgcctaca
tgcctgagttatccccatcttccgcccccttcccctacaaagccttttgcctccaagccg
cttccctactggaccaagtatgacgttgcagactggctaggatacctgaacttgggtgag
cacagagagcgtttcctggacaacgagattgacggcagccacttgccctccttaactaag
gacgactatctggatttgggtgtgacacgagtaggccaccgcatgaacatagaacgggcc
ctgaggaccgttatggacaggatgtccagcagtccattccccatctctgttctctcacct
cgagatggacagactgagaggaggagggacgacgggagtcggagctga
DBGET
integrated database retrieval system
