Etheostoma cragini (Arkansas darter): 117957568
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Entry
117957568 CDS
T07493
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecule (CAM) interaction
ecra04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117957568 (lrrc4ba)
04517 IgSF CAM signaling
117957568 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117957568 (lrrc4ba)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
NGL family
117957568 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Pam3_Gp34
Motif
Other DBs
NCBI-GeneID:
117957568
NCBI-ProteinID:
XP_034749305
LinkDB
All DBs
Position
15:16965044..17000210
Genome browser
AA seq
733 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGSELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEIGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPVLKGKYIGELDQSHFTCFAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGDKESALVAINETFIRVYPGP
TPSGHLWPEGVPTTASSLSAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGANGRGSGISGGSTVT
QSGSSIGGGQNLRLHHPEIVNLPNLARSEHLNHYYKPHHFNNNMMSLGMGTGTGVGLNNN
NNPSSCSQSQNTSISCSQVTTSGGTPTGGTLPCPVPLPQLGLHSSLKGLMGKSQNEPLLF
KSGSKENVQETQI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagcttctactgcggctcctcctccctgggtcggagttggtgggagccgcttcctcctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcagaacctg
gaggaggtgcctgaaagcatatcagtcaacacacgatacctcaacctgcaggagaactcc
atacaggttatcaagtccgacactttcaagcacttgagacaccttgagatcctccaactc
tccaagaatcagatccgtcagattgaaattggagcattcaatggcctccccaacctcaac
acattggagctctttgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctacgggagctgtggctgcgcaacaaccccattgagactctgccaggctatgcc
ttccaccgtgtgccctcgctacgtcgcttggacctgggtgagctcaagaagttggatttc
atctcagacgcagccttcgtgggcctcattaatctacgctacctgaatctgggcatgtgt
gggctgaaggacattcccaaactgacagcgcttgtacgtttggaggagctggagctgtca
ggaaaccgactggagatcatccgacccgggtcctttcagggccttgtgtccctacgcaag
ctgtggctaatgcactcacaggtgtccgtcattgagcgcaacgccttcgatgacctgaaa
agcctggaagagctcaacctgtcccataattccctgcactccttgccccatgacctgttc
acgcctcttcaccagctggagagggtacacctcaaccacaacccttggatctgcaactgt
gatgtgctttggctaagttggtggttgaaagagacggtgcctagcaacaccacctgctgt
gcccgctgccacgctccccctgtcttaaagggcaagtacattggagagcttgaccagagt
cacttcacctgttttgcgccggtcattgtggaaccccctacagacctcaatgtcaccgag
ggtatggctgctgagctcaagtgtcgcacaagcacctccacaacatctgtcaactggatc
accccgaatggaacactaatgacccatggctcctaccgggtgcggatatccgtcctgcat
gatggtacactcaacttcacgaatgtcactctgcgtgatacgggccagtacacctgcatg
gttaccaatgctgctggcaataccacggcaactgctgtactcaatgtcaccgccgctgat
gccagtgtcaactacacctactttacaacagtcacagtggaaacagtcgagacccctgga
gataaagagtctgcattggtagccatcaatgaaacattcatacgggtttaccctggcccc
acgccctcgggccacctgtggccagaaggtgttcctaccactgcctcctctctgtcagca
ggctggtcctcctcctctcctcgggccacccgacccacgttcactgtgcccatcactgag
ccaggcttctcaggcttggatgatgtgatgaagaccaccaaaatcatcattggctgcttc
gtagccataaccttcatggcagcagtgatgcttgtggtgttctacaagttgaggaaacag
caccagctgcacaaacaccacggccctgcacgcgctattgagatcatcaatgtggaggat
gagctgggggctggggcaaatggtcgtggcagtggcatctcaggaggctccacggtgacg
cagagcggaagtagcataggagggggccagaacctcaggcttcaccacccagagatagtc
aacctgccaaacctggcccgatcagagcacctcaaccactactacaaaccccatcacttc
aacaacaacatgatgagcctaggcatgggcacaggcactggtgtgggtctcaacaacaac
aacaacccctcatcttgctctcagtctcagaacacgtctatatcctgttcccaggtgaca
accagtggaggaacgcccacaggtggcaccctgccctgccctgtgcccctgccccagttg
ggtctccatagttctctgaaaggccttatggggaaaagccagaatgagcccctgcttttt
aagagcggctccaaggaaaatgtacaagagactcaaatttga
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