Etheostoma cragini (Arkansas darter): 117957636
Help
Entry
117957636 CDS
T07493
Symbol
trip10a
Name
(RefSeq) cdc42-interacting protein 4 homolog isoform X1
KO
K07196
thyroid hormone receptor interactor 10
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117957636 (trip10a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117957636 (trip10a)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
117957636 (trip10a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCH
SH3_1
SH3_9
SH3_2
SH3_3
SH3_4
COG5_N
SH3_16
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
117957636
NCBI-ProteinID:
XP_034749400
LinkDB
All DBs
Position
15:complement(12114533..12130228)
Genome browser
AA seq
598 aa
AA seq
DB search
MDWGTELWDQYDIIEKHTQSGLELVEKYVKFVKERTEIEQNYAKQLRNLSKKYNLKRIGK
DEPECRLSSYQSFLEILNEMNDYAGQRELIAENMMMNICIDLTKYLQELKQERKMYLMEA
KKAQQSLESTYKQLDSSKKRFEREWREAERAAQYAEKTDQDINATKADVEKAKQQAHMRA
HVAEECKNDYAAQLQKYNKEQNQFYFNDMPLIFNKVQDLDERRVRKLAQGYILFSDTEKH
VMPIIGKCLEGMTKAGTNVNERNDSMIVIEQNKSGFERPGDLEFEDYSQGINRASSDSSL
GTPKGPLELLGKNRNKNFWLFSKKSKLSPSTLPPFSTPPAPSPANGPSSPKFGRDPLSYC
LKEINKTVKPRIHSFRTLRRSKFTPERIMPTVTEDFTHLPPEQRRKRLQQKLEEICKELQ
KEVDQSEALGKMKDVYEKNPQMGDPASLASQISQTSQSIERLKGELNKYETWLAEAGGRG
DTLRYKSHTFNNNGAHDILGPDGAHSDESTPDPSQAIYAEFDDDFEDEELTAPIGKCTAM
YSFPGASEGTISMQEGEVLAVVEEDKGDGWTRVRRNNGDEGYIPTSYVTISIQQMKDI
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggactggggcacagagctttgggaccaatatgacatcattgagaagcacacacagtct
ggcctggagctggtggagaagtatgtcaaatttgtgaaggagaggacagagattgagcaa
aactatgccaaacaactgaggaacctttcaaagaaatataacctaaaacgaatcggcaaa
gatgaaccagagtgcaggttgtccagctaccagtcctttttggaaatcctgaatgagatg
aacgactatgcagggcagagagagctaattgctgagaacatgatgatgaatatttgcatt
gatctcaccaagtacctccaagagctcaaacaggagcgaaagatgtatctgatggaggcc
aagaaggcccagcagagtttggagagcacctacaagcagctcgacagtagtaaaaagcgc
tttgagagggaatggagagaagcagagcgtgcagcacagtacgcagagaagactgatcaa
gacatcaatgctacaaaggcggatgttgaaaaagccaaacagcaggctcacatgagagca
cacgtagcggaggagtgtaagaacgactacgctgctcagcttcagaagtacaacaaggag
cagaaccagttctattttaatgatatgccactcattttcaataaagtacaagatctggat
gagaggagagtacgaaagttggcgcaaggctacatcttgttctcggacacagagaagcat
gtgatgcctatcattggcaagtgcctggaaggcatgactaaagccggcactaatgtaaat
gagaggaatgactccatgattgtaatagagcagaacaagtcaggctttgaacgtcctgga
gatttggagtttgaggactacagtcagggcatcaaccgggcctcatctgacagtagcctg
ggcacgcctaaaggcccattggaacttctgggaaagaacaggaacaaaaacttttggctt
ttcagcaaaaagagtaagctctctccctccacgcttccacctttttccacaccccccgcc
ccctcgcctgctaatggaccctcttcccccaagtttggccgggaccctctctcgtactgt
ttgaaggagatcaataagacagtcaaacccagaatccattccttccggacactcaggaga
tcgaagtttactccagagaggatcatgcctacggtgacagaggacttcacccatcttcct
ccagagcagcgccggaagaggttacaacagaagctagaggaaatttgcaaagagctgcaa
aaagaagtagatcagagtgaggccttggggaaaatgaaagatgtttatgagaaaaatcct
caaatgggagaccctgcaagtctggcatcccaaatcagccagacgtcccagagtatagag
cggctcaaaggagagcttaacaagtatgagacttggctggctgaggcaggaggacggggg
gacacgctgcgctataaaagtcacacattcaacaacaatggagctcacgatatactcggc
cccgatggagctcactctgatgaaagcactcctgatccctcccaggccatctacgctgag
tttgatgatgacttcgaggacgaggaactaaccgctcctattgggaaatgcacagccatg
tacagcttccctggagccagtgaagggaccatctccatgcaggagggagaggtgctggct
gtggtagaggaggacaaaggggacggctggacccgtgtccgtaggaacaatggagatgaa
ggctacatacctacatcgtatgtcaccatcagcattcaacaaatgaaagacatatga
DBGET
integrated database retrieval system
