Etheostoma cragini (Arkansas darter): 117957753
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Entry
117957753 CDS
T07493
Symbol
ap5z1
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117957753 (ap5z1)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117957753 (ap5z1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Phage_TAC_14
Motif
Other DBs
NCBI-GeneID:
117957753
NCBI-ProteinID:
XP_034749658
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Position
15:complement(3865678..3874207)
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AA seq
818 aa
AA seq
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MYSHGAESLIKQAREIQESELQKFYTRLVKLLQGKELGHETVDSLQRLHLILSATKYTRT
LPPELQKRVQSLLSSPTEHFQVLSSAVLRETPPLSGQEGNYNQENISQLNSHAAALVLAQ
AGSMADLSSLCARLLRGLESRPSEAPAHSLTYTLPILNTILTLSPECLTEDHVTLLSKKL
VDWLRYASITQGGGASAGGFFTGHRSRQPVPTAELDGAVSGDFFTVLCVGQGFTEDQWMN
VYSFSMLRHWLLTYHSVSSGNGTADTANRLQLSLSLSHSLSNDDRSEVDGSVVSMVSATS
STSRLLPPKERLREKSFQYCLRLIEQSDRKAHKKADTDLQKACLVEAVCILDCVCEEDAS
LVFRAFPCIKALFGRLSSDLAFARVLLPIAQFYLNHGEMAAVDCESVWKLVFGRFPAELF
NDHFLAHELLRFLRLNLKSLQLRVPQYTRSFPNLLKFLAWDSPAVVDDFVDLLSSLVTAG
TAVELLHTLLDLPCLSATLVLQVRSTCLPTSEPGGRVLLSPDAYRNPSFRGLFLFLLRGD
AGSGDTIDRLSTLHELLAESADWPRVVQCAQTVPVLLHVYFNTVITGADEKLLTHLILVM
LERSSLLLNIPEYNKEIHRVFSSHLLKFCKLHPSLVVDQSPELLEFAGATANVYSKEEIY
THVVWVLGEYLSVSCDSRCSVRLITSCFEALEAVLFEITSSVPPPGADCPAPRVVTTLMS
ALAKLASRSHDLIPRVSLFLSKLRTLTRGGSVAWCADEEDLVAIVTRGEELWSLLKAPGV
AQSVLTPPPHVTTPQWHRDTNVAMPLRLRALTSLTHSQ
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtactctcacggtgcagagagtttaattaaacaagcaagggagattcaggagtctgag
ctgcagaagttttacaccagattagtcaagctgctccaggggaaagagctcggtcatgag
actgtcgactctctgcaaaggctgcacctcatcctctccgccaccaagtacaccaggacg
ttgcctccggaacttcagaagagggttcaatcactcctctcgtcaccaacggagcatttt
caggtgctgagctcagctgtgctcagagagacaccgccgctgtctgggcaggaagggaac
tacaaccaggagaacatcagtcaactgaacagccatgctgctgccctggtgctcgctcag
gctggatccatggctgatctgtcgtctctctgcgcccggctccttcgcggtctggaaagc
cgaccatcagaggcgccagctcactcgctcacatacaccctgccgattctcaacaccatc
ctcacactcagccccgagtgcctcactgaagatcacgtgaccctcctgagtaaaaagctt
gttgattggttgcgttatgccagcatcactcagggaggcggggcttccgcgggaggattt
ttcacaggacacaggtcacgtcagccggtaccgacagcggagctggatggagcggtgtcg
ggggatttcttcactgtgctgtgtgtgggccagggcttcacagaggaccagtggatgaac
gtgtactccttttcaatgcttcgccattggctcctcacctaccactctgtttctagtggc
aacggcacagctgacactgcaaacaggctacagctcagcctctccctctcccactccctt
tctaatgatgaccggtcggaggtggacggatcagtggtttccatggtttcagcgacttcc
tccaccagccgattgctgcctccaaaagagcgtctgagagagaagtctttccagtactgc
ctacgcctcatcgaacagagcgatcgcaaggcacacaaaaaggccgatacggacctgcaa
aaagcgtgtctggtggaggcggtgtgtatcctggactgtgtgtgtgaagaggacgcctcg
ctggtcttccgagcgttcccatgcattaaggcgctctttggtcggctcagctcagacctg
gcgtttgccagagtcctgctgcccatagctcagttctacctcaaccatggcgagatggcg
gcagtggattgcgagagtgtgtggaagctggtgtttggccgattccctgccgagctgttc
aacgaccacttcctggcacacgagcttctacgcttccttcgactgaacctcaagagccta
cagctccgagtcccacagtacacccgctccttcccaaacctgctgaagttcttagcgtgg
gacagcccagcggtggtggatgactttgtggatctgctgtcatctctggtgacagctgga
actgcagtagagcttctccacactctgctggacctgccctgtctctctgccacactggtc
ttacaagtcaggtcaacttgtttgcccacctctgagccaggaggacgtgtcctcctgtca
cctgatgcatatcgaaacccatctttccgagggcttttcctcttcctgcttcgaggggat
gccggctcaggtgacaccattgaccgactgagcacgctccatgagctgctagctgagagc
gctgattggccgagagttgttcagtgtgcccagactgttcccgtgcttttgcacgtttat
ttcaacacggtcattacgggagccgatgagaagcttttaacacacttgattctggtgatg
ctggagagaagtagcctcctcctcaacatccctgaatacaataaagagatacacagggtg
ttcagcagccacctgctgaagttttgcaagctccacccgtctcttgtagtggaccagtct
cccgagctgctggagttcgctggagccacagccaacgtctatagcaaagaagaaatctac
acacatgtggtgtgggttctgggagagtacctctccgtgtcatgtgactcccgctgctcc
gtgaggctcatcacttcctgttttgaggcgttggaggcggtgctgtttgagatcacttca
tctgtcccaccacctggagcagattgcccagcacccagagttgtcaccacgctaatgagc
gctctggctaagctggcatcacgatcacatgacctcatacccagagtgtctctgttcctc
tccaagctaagaacgctaaccagaggcggttcagtggcctggtgcgctgatgaagaggac
cttgttgccatagtaacgcgaggcgaggagttgtggtcactgctgaaagcccccggtgtg
gctcagagcgtcctgaccccacctccacatgtcacaacaccccagtggcacagagacacc
aacgtggccatgcccctgcgactgcgagccctcaccagcctcacacactcacaataa
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