Etheostoma cragini (Arkansas darter): 117957754
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Entry
117957754 CDS
T07493
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
ecra04137
Mitophagy - animal
ecra04144
Endocytosis
ecra04340
Hedgehog signaling pathway
ecra04350
TGF-beta signaling pathway
ecra04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117957754 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117957754 (smurf1)
04350 TGF-beta signaling pathway
117957754 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117957754 (smurf1)
04137 Mitophagy - animal
117957754 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
117957754 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117957754 (smurf1)
04121 Ubiquitin system [BR:
ecra04121
]
117957754 (smurf1)
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117957754 (smurf1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117957754 (smurf1)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117957754 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
117957754 (smurf1)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
HECT type E3
117957754 (smurf1)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117957754 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
117957754
NCBI-ProteinID:
XP_034749660
LinkDB
All DBs
Position
15:complement(3802968..3820756)
Genome browser
AA seq
729 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQEGRLQSQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQAKESSQAPPMDVGGEEGGGGGVGGGGDGDVAARYERDLVHKLKLLRHE
LSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWL
YLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGHYING
SFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFLQH
ELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDHKEL
ELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGSTRVP
LQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAV
EETCGFAVE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgcctgccagatccatttgccaaggtt
gtggtggacggatcaggtcaatgccactctacagacacagtcaagagcacactggacccc
aaatggaatcagcactacgacctctacattggaaagacagactccatcaccatcagtata
tggaaccacaagaagatccataaaagacagggggcgggcttcctgggctgcatacgactg
ctttccaacgccatcagcaggctaaaagacacaggataccagcgtctagatctatgtaag
ctgaacccctcggacagtgacgcagtgcgggggcagatagtagtgagcttacagacgcga
gaccgtatcggcagcggaggccctgtggtggactgcagaggccttttggaaaatgatggg
cctgtgtttgagggatgtttcagtgaagagccgctgccctactccgaccccactggtgcg
gcggggggcgggaactgtcggcttgactcacccagtcaggagggccgtcttcagtcgcag
cgaatcagagggcaggactccagaggccatggacacacccctcagaacagaccgcatggg
caccaaccgcccgacctgccagagggatatgagcaacgaacaacagtgcagggccaggtg
tacttccttcacacacagacaggcgtcagcacctggcacgaccctcggataccgcgggac
ctggccagtgtgagctgtgaggagcttgggcctctgccagtgggctgggaggtccggagc
accgtgtcaggccggatctactttgtggaccacaacaaccgaacaacacagtttacagac
ccacgcctacacaccattatcagccagcaatcccaagcgaaggaatcctcgcaagccccc
ccgatggatgtggggggtgaggaagggggaggtggaggggtgggcggcggaggagatgga
gatgtggcagcgcgctacgagagagacttggtccataaattgaagctgctacgccacgag
ctgtccttgcagcagcctcaagcaggacactgtcgcatagaggtgtcccgagaggagatc
tttgaggagtcatatcgacaaataatgaagatgaggcccaaggacttgaagaagcgtctg
atggtgaagtttaggggagaggagggcctggactacggtggggtggccagggagtggctg
tacctgctgtgtcatgaaatgttgaacccctattacggcctgttccagtactccacagac
aatatctacacactacagatcaaccccgactcctccatcaaccctgaccacctgtcatat
ttccactttgtgggccgtgtgatgggcctggctgtttttcatggtcactacatcaacggg
agcttcacgctgcccttctacaaacagctgctaggcaaacccatccagctcaacgacctg
gagacgaccgacccggagttgcacaagagccttgtctggatattagagaatgacatcacg
tcagtcctcgaccacactttctgcgtggagcacaacgcctttgggaagttcttgcaacat
gaactcaaacctaatggccgcaatatccctgtcactgaggagaacaaaaaagaatacgtc
agactttatgtaaactggaggtttatgcgtggaattgaagcccagtttctggctctacaa
aagggattcagtgaacttatcccccagcacctcctcaaacctttcgaccataaagaactt
gagttaatcattggtggactgggaaaaatagatcttgcagactggaagacgaacacccgc
ctgaagcactgcacaagtgaaagcaacgtggtgcggtggttctggcaggcagttgaggcc
ttcagtgaggagaggagggggcgcctcctgcagtttgtcacaggctccaccagggtcccc
ttacaagggttcaaagcgctgcagggttctacaggttctgcaggaccaaggctcttcacc
atccatttgatagacgccaacacagacaacctgcccaaggctcacacctgttttaaccgg
atagacatccctccctacgagtcttacgagaagctctatgagaaactgctgacggctgtg
gaggagacctgcggctttgctgtggagtga
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