Etheostoma cragini (Arkansas darter): 117957830
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Entry
117957830 CDS
T07493
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
ecra04137
Mitophagy - animal
ecra04144
Endocytosis
ecra04340
Hedgehog signaling pathway
ecra04350
TGF-beta signaling pathway
ecra04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117957830
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117957830
04350 TGF-beta signaling pathway
117957830
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117957830
04137 Mitophagy - animal
117957830
09144 Cellular community - eukaryotes
04520 Adherens junction
117957830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117957830
04121 Ubiquitin system [BR:
ecra04121
]
117957830
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117957830
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117957830
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117957830
Autophagy
Mitophagy
Other mitophagy associated proteins
117957830
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
HECT type E3
117957830
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117957830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117957830
NCBI-ProteinID:
XP_034749782
LinkDB
All DBs
Position
15:2458815..2521091
Genome browser
AA seq
776 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGCKYQRLDLN
KLSPNDSDTVRGQIVVSLQSRDRIGSGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNH
ITRTTQWERPTRPASEYSSPGRPLSCIVDENTPVSTNGATPTTVLPPIDGDHRVQERRVR
SQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCE
ELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPSPSPNGSRGGIE
SQNVSRQNQLKDQAQQAMVSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGH
CRIEVSREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNP
YYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQL
LGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIP
VTQDTKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKI
DINDWKSNTRLKHFTPESNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGA
AGPRLFTIHQIDASTNNLPKAHTCFNRIDIPPYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagtccggcggaatggccctgtgaagctgcgattaacagtcctctgc
gccaaaaacctggtgaagaaggacttcttccgtctccctgatccctttgccaaggttgtt
gtggacggttcagggcaatgccactctacagacactgtgaggaacacacttgaccccaag
tggaatcaacactatgatctatacatcgggaaatcagattctatcaccatcagcgtgtgg
aatcacaaaaagattcacaagaagcagggggctgggttccttggctgtgtccgccttctg
tccaacgctatcaaccgccttaaagacacaggctgtaagtaccagagactagacttgaac
aagttgagtcccaatgacagtgacacagtcagaggccagatagtggtgagcctgcagtcc
agggaccggataggctcaggaggccctgtggtggactgcagtcggctgtttgacaatgat
ctcccagatggctgggaggagcggaggacggcgtctggacggatccagtacttgaaccac
atcacacgcaccacgcagtgggagaggcctaccaggcctgcatcagagtactccagccct
ggtcgtcctctcagctgcatcgtggatgagaacacgcccgtcagcaccaacggggccacg
cccaccaccgtgttgccgcccatcgacggcgaccatcgggttcaggagagacgggtccgc
tcccaaaggcaccgcaactacatgagcagaacccacctgcacacgcccccggacctcccc
gagggatatgagcagaggaccacgcagcaaggccaagtgtacttcctccacactcagact
ggtgtcagcacttggcacgaccccagagtaccaagagatcttagcaatgtgaactgtgaa
gaactgggtcctttgcctccaggatgggagatacggaacactgccactgggagggtttac
tttgtcgaccacaacaaccgaaccacgcagttcacagacccgcgcctctccgccaacctg
catctagtcctgaatccaagtccaagcccaagccccaacggttctcgaggaggcatcgaa
agtcagaatgtcagtcgtcagaaccagttgaaggatcaggcccagcaggctatggtgtcc
cctgctcagctcccggaagaggccgagtgcctcacggtgcccaagtacaagagggacctt
gtccagaagctcaagatcctccgccaggaactgtcccagcagcagcctcaggccggccac
tgccgcatcgaggtatcccgcgaggagatcttcgaggagtcgtaccgccaggtgatgaag
atgaggccgaaggacctgtggaaaaggctaatggtgaagttcagaggagaggaggggctt
gattatggaggagtggccagggagtggctctacctgctgtcgcacgagatgctgaaccca
tactacggcctgttccagtactcccgggatgacatctacacactgcagataaacccagac
tctgccgtcaaccctgagcacttgtcatactttcactttgtgggccggatcatggggatg
gcagtgttccatggccactacatagacggaggcttcactctgcccttctacaaacagctg
ctggggaaacccatcactctggacgacatggagtctgttgaccctgacctgcacaacagt
ctcgtgtggatcctggacaatgacatcacaggtgtgctggaccacaccttctgcgtggaa
cacaatgcttatggagagatcatccagcatgagctcaagcccaacggtaagagcatcccc
gtcacccaggacaccaagaaggagtacgtgcggctctacgtcaactggcgttttctgcgg
ggtatagaggcccagttcctggctctgcagaagggcttcaatgaggtcatcccccaacac
ctgctgaaggccttcgatgagaaggagctagagctgattgtgtgtggcctgggtaaaatt
gacatcaacgactggaagtccaacacgcggctcaaacacttcactccagaaagcaacatt
gtcaagtggttctggaaagctgtggagtccttcgatgaggagcgccgagcccggctgctg
cagtttgtcaccggctcctccagagttcccctgcaaggattcaaggcccttcaaggtgct
gctggcccgcggctctttaccatccaccagattgatgccagcaccaacaacctgcccaaa
gcccacacctgttttaaccggattgacattcctccctacgagcactatgacaaactgtac
gacaagttgctcactgccattgaggagacgtgcggctttgctgtggagtga
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