Etheostoma cragini (Arkansas darter): 117957935
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Entry
117957935 CDS
T07493
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117957935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117957935
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117957935
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117957935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
WWE_5
zf-UDP
zf_RING_Vps8
zf-ANAPC11
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
117957935
NCBI-ProteinID:
XP_034749942
LinkDB
All DBs
Position
2:2223699..2248995
Genome browser
AA seq
743 aa
AA seq
DB search
MANSNNMLLASVVVVWEWLNEHGRWRPYSPAVSHQIEAAIRSSDPRGGSVVLGQVDSRLS
PYIIDLQSMHQFRQDTGTIRPVRRSFYDPASAPGQGWQWEWENDAGTWTAYDMEVAIAIE
NAHSRQQPCLDLTPLGFCYLIDFQNMTQVNRQSQRCRRLQRRADMAYPLVSGPLPIPKGS
GAGGGITGALLGVGVSGASSFYSNGSLPASGLGQPCSCQQCMLVLSVKTNTGGAGIQTLG
RRSLTMQRPKNSAAIVSKPLSPSKSATLGRGQQQNSNSNYYQTLPHGLAISKNTASPRRN
AQLFAQSLAALTAGTSTLGISSSSNRPPPPSLPPPQPPSSNPNLIPPSILAKHSSSSANE
SVPTATLITPAKSVTKPPSPVPSPSPMVMKPQRPPTSAATVCHAPLPQRSSLAGLSRPAL
QRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGITGILMSAAALPVCLTRPPKLVLH
PPPVSKSDIKPVPGFGHCCRKTTKKQARKGKTPEEVVKKYLQKVKSPPEEDCTICMEPLG
GPSGYKGPGVGPVSRAESVGRLAQCGHQYHFQCLVAMYNNGNKDGSLQCPTCKTIYGVKT
GNQPAGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGLQGPEHPNPGKPFTARGFPRHCYLP
DSERGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGFPDPG
HLDNVLEELRAQGITEDDGLMEK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggccaacagtaacaacatgctcctggcctctgttgtagtggtgtgggaatggctaaat
gaacacggacggtggcggccctacagccccgccgtctcccaccagatagaggcggccatc
cggagcagtgacccacgcggagggagcgttgtactcggccaggtggacagccggctctcg
ccgtacatcatagatctccagtctatgcaccagttcagacaggacacaggaaccatccgt
ccggtgcggaggagtttttatgacccagcctcagccccaggtcagggctggcagtgggag
tgggaaaacgatgcaggtacatggacggcctacgacatggaggtggccatagccatcgag
aacgcccacagtcggcagcagccctgtctcgacctgacaccactcggcttctgctacctc
atcgattttcagaacatgacacaggtgaacagacagagccagaggtgtcggaggctccag
agacgtgctgacatggcctaccctctagtgtccggtcctctcccaataccaaagggaagc
ggtgcaggaggaggcataacaggagccctgctgggggttggggtgtcgggggcaagctct
ttctactccaatgggagcttaccggcttctggattgggccaaccttgttcctgccagcag
tgcatgctggttcttagtgtaaagaccaatacaggaggagcagggatacagactctaggt
agacgctcactaaccatgcagcggcctaagaattcagcggccattgtctctaaacctctg
agtccgtctaaatcagccactctagggagaggacagcagcagaactccaactccaactac
tatcagacgctgccgcatggtctcgccatctccaaaaacaccgcctctccaagaaggaac
gcccagctgtttgctcagtcgctggctgcactcaccgctggcacctccactctgggtatc
tcctcgtcttccaacaggccgcctccaccgtccctcccgcctcctcagcctccatcttcc
aaccctaacttgatccctccatccattctggccaagcactcctcatcttcagcgaacgaa
tcagtgccaaccgccacattaattacccctgccaagagcgtgaccaagcccccttctccg
gtgccatctccgtcgccgatggtgatgaagccgcagcgcccaccgacgtccgcagcaaca
gtgtgccatgccccgttgccacagagatcaagcttagcagggctgagccgaccagcatta
cagaggattgcgatggcccagtccagagcgctcatagcctcaggtgtgcccaccgtccca
gtgaagaacctcaatggatccagtcctgttcaccctgcactggcggggatcacaggtatc
ctaatgagtgctgccgctctgccggtgtgtctgactagacctccaaaattggtgctacac
cctcctcctgtcagcaagagcgacatcaaacccgtgccaggctttggccactgctgcagg
aagaccaccaagaaacaggctcgcaagggtaaaactccagaggaggtggtaaagaagtac
ctgcagaaagtaaaaagtccaccagaagaggactgtaccatctgtatggagccgttgggg
ggtccgtctggttataagggtccaggagtggggcctgtgtctcgggcagagtcagtcggg
cgactagcacagtgtggacaccagtaccatttccagtgtctggtggccatgtataataat
ggcaacaaggacgggagtcttcagtgtcccacctgtaaaaccatctacggcgtaaagaca
ggcaaccagccggcagggaagatggagtaccacgtgatccctcactctctaccaggacat
cctgactgcaaaaccatacgcattatctacaacataccaccaggccttcagggaccagaa
catccgaacccagggaagccatttactgccagaggctttccccgacactgctacctccca
gacagcgagagaggacgcaaggtattgagactgctcctggtagcctgggaccgcaggttg
atcttctcagttgggacttcgagcactactggagagtctgacaccgttatctggaacgag
gtccatcacaagacagagtttggctcaaacctgacaggccatggcttccccgaccccgga
cacctcgacaacgtcctggaagagctccgagctcagggcatcacagaggatgacggactg
atggaaaagtga
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