Etheostoma cragini (Arkansas darter): 117957970
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Entry
117957970 CDS
T07493
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ecra00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117957970
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
117957970
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecra01003
]
117957970
Enzymes [BR:
ecra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
117957970
Glycosyltransferases [BR:
ecra01003
]
O-Glycan biosynthesis
Glycosaminoglycan
117957970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
117957970
NCBI-ProteinID:
XP_034750019
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All DBs
Position
2:24229945..24310916
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AA seq
950 aa
AA seq
DB search
MVGGLCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEDRENGGSNVREKRDRVAG
NKAAGSDYFQHGVQRPRQHLSPPGKGTSRHIQQPDGYYSHRPKEKNRVDSNNENSVPKDF
ENIDNSNFGARSQPHRQSVGATSSKQQQQQREHLQQKVHSQQQAWRDNSPSLGRSSNEVL
PVGHQPLAVGNNASYPGDQGVAGVSHQHYRASQAQQAQSQHRHQHPHKRQATAAPLEVTY
DQPPKCEISGKEAISALSRAKSKECRQQIAEVYCRHKEGQLMPEKVTRYCPLEGKANANV
QWDEDSVESFPSKPVRIAFVLVVHGRASRQFQRLFKAIYHTSHYYYIHVDQRSNYLHRQV
HAMAAQYPNVRVTPWRMATIWGGASLLTMYLRSMADLLAMRDWSWDFFINLSAADYPIRT
NNQLVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMWRLGDRKIPEGISVDG
GSDWFLLNRMFIEYVINSKDDLVTNMKRFYAYTLLPAESFFHTVLENSAHCESMVDNNLR
ITNWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTVRPTFFARKFEASVNQEIVNQ
LDAYLFGPFPQGTQALKSYWENVYEEPDGVATLSDTQLTYFHSFSRLGLARAAASLQGNP
KDHSCRYFPMGHPVSVHLYFQSDQFQGYLVKHHATNLATSKLETMETWVVPKKNFKLATP
PSSTFSRLQFAEIGTEWDAKERMFRNFGGLMGPMDETVGMQKWNKGPNITVTVVWIDPTN
VIAATYDILIDASAEFTHYRPPLNQPLRPGVWSIRILHHWSPVAEMHFLIAPLAYNKHQP
IRQEDTLKLHNGPAKNSYMEQSFHGLNPVLNLPVSLGYVEQAKRNAALTGPELERWVDSL
VGELWEAADICAVGPTACPVMQACPKNPWSSLSPDPKSQLGMPRADGRIR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggcttgtgtgcacgcaggttggcccgccggtcgcggtccgccttgatagca
gccctcacggtgctgctcgtgcagacgctaattgtgtggaacttcagcagcctcgactcc
ggcgaagacagggaaaacggaggctcaaatgtgcgggagaagagggaccgggtcgcaggc
aacaaagccgctggcagcgactatttccagcacggggtccagcgtccgcgacagcatctt
tctccgcctgggaaggggacgtctcgccacatacagcagccggatggatattactcgcac
cgcccaaaggagaaaaatagagtggatagcaacaacgagaactctgtgcccaaagacttt
gagaacatagacaatagtaactttggtgcacgctcacagccccaccggcagtctgtagga
gccaccagcagcaagcagcagcagcaacagcgggagcatctgcagcagaaggtccactcc
cagcagcaggcctggcgggacaactccccaagtctgggccgcagctcaaacgaagtgctg
cctgtaggccaccagccgctggcagtcggcaacaatgcctcctacccaggtgatcagggc
gtcgcgggagtgtcgcaccaacactaccgtgcctcacaggcccagcaggcccagtcacag
cacagacatcagcacccgcacaagaggcaggcaactgcagcgccactggaggtgacctac
gaccagccacccaagtgtgagatcagtgggaaggaagccatttcagctctttccagagcc
aagagcaaggagtgccggcaacagatagctgaggtgtactgcagacacaaggaagggcag
ttaatgcctgagaaggtcactcgctactgcccccttgagggtaaagccaatgccaatgtc
cagtgggatgaggactctgtggagagttttccatcaaaacccgtcagaatagcgtttgtc
ctggttgtccatggacgagcctctcgccagtttcaacgccttttcaaagccatctaccac
acctcgcactactactacatacatgtcgatcagcgctctaactacctgcacaggcaggtc
cacgccatggctgcccagtatccaaatgtgagggtgacaccctggcgcatggccaccatc
tggggtggtgccagtctgctgaccatgtatcttcgcagtatggctgacctgcttgccatg
agggactggagctgggatttcttcatcaacctcagtgctgccgactaccccatcaggacc
aacaaccaactggtggccttcctgtccaaatacagagacatgaacttcatcaagtcccat
ggcagggacaacgccaggtttatccgtaagcaaggtctggaccgtctgttctttgagtgc
gacacccacatgtggaggctgggcgaccgtaaaatcccagaaggcatctctgtggacggc
gggtccgactggttccttctcaaccgcatgttcatcgaatatgtcatcaactccaaggac
gacctggtcaccaacatgaagcgcttctacgcctacactcttctgccagccgagtcgttc
ttccatacggtgctggagaacagcgcccactgtgagagcatggtggataacaacctacgc
atcaccaactggaaccgcaaactgggctgtaagtgtcagtacaagcacattgttgactgg
tgcggatgctcccctaatgacttcaagcctgcagacttccaccgctttcagcaaacagtg
cgtcccacattttttgccaggaagtttgaagccagcgtgaaccaggagatagtgaaccag
ctggacgcctacctgtttggaccgtttccccagggaacgcaggccctaaagtcatactgg
gagaacgtgtacgaggagccagatggcgtggccactctgtcagacacgcagctcacgtac
ttccactccttctcacggctgggcctggccagagctgctgcctcgctgcagggaaaccca
aaagatcacagctgcaggtactttcccatgggccacccagtgtcagtgcatctctacttc
cagtcggaccagttccagggctacctggtcaagcaccacgccaccaatctggcaactagc
aagctggagaccatggagacctgggtagtacctaagaaaaactttaagcttgccacccct
cccagcagcactttcagcaggttgcagttcgcagagatcggcactgagtgggatgccaaa
gaacgtatgttcagaaactttggcggcctgatgggccccatggacgagacagtaggcatg
cagaagtggaataagggtcctaacatcaccgttacagttgtgtggatcgaccccaccaat
gtcatcgccgccacctacgacattctgatcgatgccagcgcagagttcacacactaccgc
ccgccactcaaccagcctctgcggcccggtgtgtggagcatccgcatcctgcaccactgg
agccctgtggctgagatgcacttcctcattgccccgttggcctataacaagcaccagcca
atacgacaagaggatactctgaagcttcacaacgggccagcgaagaacagctacatggag
cagagtttccatggcctcaacccggtgctcaacctccctgtcagcctgggttacgtggag
caggccaagaggaacgcggccctgacaggcccagagctcgagcgttgggtagacagcctg
gtgggcgagttgtgggaggctgccgacatctgcgccgtgggccccacggcctgccctgtg
atgcaggcctgccctaagaacccttggagctccctgagcccagaccccaaatcccaactg
ggaatgccacgcgcagacgggcgcatcaggtag
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