Etheostoma cragini (Arkansas darter): 117958027
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Entry
117958027 CDS
T07493
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117958027 (toporsa)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117958027 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117958027 (toporsa)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117958027 (toporsa)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117958027 (toporsa)
UBL E3 ligases
117958027 (toporsa)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117958027 (toporsa)
Cilium and associated proteins [BR:
ecra03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117958027 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
117958027
NCBI-ProteinID:
XP_034750120
LinkDB
All DBs
Position
2:complement(13452478..13456512)
Genome browser
AA seq
780 aa
AA seq
DB search
MSAIQIALQQSQKKGRRKTSEAMSAEVSPDSKCPICLDVFNNISYLDICLHKFCFRCIQE
WSKNKAECPLCKQPFNSIYHSIKSDQDFKKYDLQPVDNGSFGTFGGVRFRYRTTLTGVHR
QMRGRTSPPPDNGVMFEASANPPQQPQDRYIRRMLKRLAEKRRAASEGRAVNSVREQEMV
NFRRELYRRGVRIRSVRDGGRSRDTSAEFFRRNPACLHRLIPWLKRELIVLYGAHGSLVN
IVQHIIMSRITRYDMEDGAIQEELRPFLQGRTEHFLHEFISFAKSPFNMEAYDQHASYDC
PAPSSNEGSSSNSSVIAISEDEEDSVELDPPGDATSNLSHSAWDDETPGPSYSTTAEQSR
AECLSVLDLDSDSDSSLEEETQGFGASPQEVTPHNKTDVAHGGANDEECLSHDSDDCVII
SFVKPTAERTPELVQLSSDSDESASEDIKAVPLLPQHIRFSSLSPIASQSSDPSGAGQSE
SAETDNYHQFYSKDRCSSSTSSRHKTSSKLDRKDTGRRFERNDRSREKHLSKDTDHRRKR
RSRSGEHRPSSRSPVISPSSTQSRDRGSSYSSSKDYSKCDRNYKRRDRDYSYQSNRRYSQ
ERNNSGVNYTEKRSYYYSIRNYSDRHSGSRSHSRDSRRRDRGHSRSRTCSSSRSPSTKSR
SHNNKPGGKRKYKTRHLEEASKNTLSLSNANGDSPVLSTKHKKKSKEKHRKKSKDRSRKT
SRSLSVELVNEENPNERSKHHHKKKKKHKKKSKRHNSNERTGKHSPTVITIDSDSDSFCE
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaatccagattgccctccagcagagccagaaaaagggcagaaggaaaacttct
gaagcaatgtctgcagaggtgtccccagactcaaagtgtcccatctgtttggacgtattt
aacaacatttcttacctggacatctgcctacacaagttctgtttccgctgtattcaggag
tggtcgaagaacaaagctgagtgccctctatgcaaacagccgtttaattcaatctatcac
agtataaaatctgatcaggactttaagaagtatgatctgcagccggtggataatggctct
ttcgggacttttggcggagtgcggtttagataccgcacaactcttactggagtccatcga
cagatgcggggaaggacatctccacctcccgacaatggagtaatgtttgaagcctcagca
aaccccccacaacagccgcaggaccgctacatccggcggatgttgaagaggttggcagaa
aagaggagagctgcgagtgaaggcagggcagtgaacagtgtcagagagcaggaaatggtc
aacttcaggagggaactgtaccgacggggggtgaggattcggagtgtccgggatggaggc
cgctcccgcgacacctcagctgagttcttccgaagaaatcctgcctgcctacatagactg
atcccctggctaaaaagagaactcattgtgctatatggggcccatggctctttggtcaac
atagttcaacacatcatcatgtcacgcattacacgttatgatatggaggatggggctatt
caggaagagctcaggccgttcctccaggggcgcacagagcactttttgcatgagttcatc
agctttgcaaagtcccccttcaatatggaggcctatgaccagcatgcttcctacgactgc
cccgccccttcctcaaatgaaggcagcagttccaattcatctgtaatagctatctcagag
gatgaggaggactcagtggagttggaccccccaggtgacgccacgtctaatttgagccac
tctgcgtgggatgatgagacgcctgggccatcctattctacaacagcggagcagagcagg
gccgagtgtctgtcagtcctcgacttagactcggattcagacagcagtttagaggaggag
acgcaggggtttggggcctctccacaggaagtgactcctcataacaaaacggacgtggca
cacggtggagctaacgatgaagagtgtctgtctcatgacagcgatgactgtgtcattata
agttttgttaagccaacagctgagcggactcctgaactggttcagctctcctctgactct
gatgagtctgccagtgaagatattaaagcagtacctcttctacctcaacacatccgcttc
tccagtctcagtcccatagcttcacagagtagtgatccaagtggtgctggacagtcagaa
agtgcagaaacggacaactatcatcagttttattcaaaagatagatgtagctcttcaaca
tctagcagacacaaaacatccagtaagttagacagaaaagacacgggtagaagatttgag
cgtaatgatagatctagagagaagcacttgtctaaggacacagaccataggagaaaaagg
aggtcaagaagtggagagcacaggccctccagcaggagcccagtgatctcccccagcagc
acgcagtccagagacagaggttcttcttactccagtagcaaagactactcgaaatgtgac
cgtaattataaaaggagagaccgtgattacagctatcaatcaaataggcgttatagtcaa
gagagaaataatagtggggtaaattacacagagaagcgatcctactattacagtattcgc
aactactcagatcggcactctggctccaggagccacagcagagattcgcggaggcgggac
agggggcattctcgttctaggacttgttccagcagtcggtccccttcaacaaaaagtaga
tctcacaacaataagcctggtgggaagaggaaatacaaaacaagacatttggaagaggca
tccaaaaacacactttccctctcaaatgctaacggggactcccccgtgttgtccacaaaa
cacaagaaaaagagcaaagagaaacatcgtaaaaaatccaaagacaggtcgagaaagact
agcaggagcctcagcgtggagctcgtcaatgaggaaaaccctaatgagcggagcaagcat
caccataagaagaagaagaaacacaagaagaaaagtaaaaggcacaatagtaatgagcgc
acagggaaacactcacccactgtcattaccattgatagtgacagtgattctttttgcgag
tga
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