Etheostoma cragini (Arkansas darter): 117958057
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Entry
117958057 CDS
T07493
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117958057 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117958057 (rangap1a)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117958057 (rangap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
SDA1_dom
PTPRCAP
CPSF100_C
BUD22
Motif
Other DBs
NCBI-GeneID:
117958057
NCBI-ProteinID:
XP_034750188
LinkDB
All DBs
Position
15:3484187..3494757
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AA seq
574 aa
AA seq
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MATDVVAQLADSLAKAVVEEGELSYKGQGRKLDDAQSVEEMVKEIQDFEDLQALRLEGNT
IGVAAAQAIAKALETKSKFKRCYWSDMFTGRLRSEIPAALNSLGDALMLAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACYTLQELRLNNCGMGIGGGKILASSLIQCHKKSSAEGTPL
GLKIFVAGRNRLENDGATALAQAFQLMGSLEEVHMPQNGINHPGVTALATAVQHNAGLRI
LNLNDNTFSEKGAIAMAQALKHLRSIQVINFGDCLVRPAGAIAIAETVSEGLPILKEINL
SFGEITEEAALAVAQAVKDRNQLEKLDLNGNCLGEDGCKALRDAMEGMNIGNLLGSLSDD
EGEPEDDYDDEDEEDDEDDEDVDEEEIEEEEEEEEEEESNGIKLSTPVSAPRPPDVSSFL
SFPSPDKLLKLGAKRALLIEQQVDVSDATKTAEAFLKIASVYKEDNTEVKNAVLDSIDGL
LKKAFASPSFQGYGFVSSLLVLLGLLKSEDKVKPVLVVPGHLHAVEHVVRQDYFPKENIA
VLQAFMSRNIKALESCGHATNSLQSTLQRVSSEG
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagatgttgttgcacagttggccgactctctggcgaaggctgtggtagaggaa
ggagagctgagctacaaaggccagggaagaaagctggatgatgcccaatcagtggaggag
atggtcaaggaaatccaggactttgaggacttacaggctctgaggttggagggaaacact
ataggtgtggcggcagcacaggcaattgccaaggccttagaaacaaagagcaagttcaag
cgctgttattggagtgacatgtttaccggtcgcctgcgctctgaaatcccggctgccctg
aattcactgggtgacgctctgatgctggcgggtgccaggctgaccgttttagatctcagt
gacaacgcttttgggccagatggggtgaagggcatcgagaagttgctcaagagtacggcc
tgctacacattgcaggagctacggctcaacaactgtggcatgggcattggaggggggaag
atcttggcgtcttcattgatccagtgccataaaaagtccagtgccgagggaacccccctc
ggccttaagatatttgttgcagggaggaaccgtctggagaacgatggagccactgccctc
gctcaagccttccagttgatgggcagcctggaggaggttcacatgccccagaatggcatc
aatcatcctggtgtgacagctctggccacagccgtgcagcacaacgcaggcctccgcatc
ctcaacctcaacgacaacaccttctctgagaagggggctatcgccatggctcaggccctg
aagcacctgcgcagcatccaggtgataaactttggcgattgtctggtgcggccagcagga
gccatagctattgcagaaacggtatcagagggattaccaatccttaaggaaatcaatctg
tcatttggcgagattacagaggaagctgctctagctgtggcacaagcagtaaaggaccgg
aaccagctggagaaactcgacctaaatggtaactgtctaggagaggatggctgcaaagct
ttgagagatgccatggaaggcatgaacattggcaatcttctagggtcactcagtgacgat
gagggtgagccagaggatgactatgatgacgaagatgaggaagatgacgaagatgacgag
gatgtggatgaggaggaaatagaggaggaagaggaagaagaggaggaagaggaaagcaat
ggcatcaagctgtccacccctgtatcggcaccacggccgccagacgtctcgtccttcctc
agctttccgtccccagacaaactgctcaaacttggggccaagagggcgttgctgatcgag
cagcaggtggacgtgtcagatgctacaaaaacagcggaagccttcctcaagattgcatct
gtgtacaaggaagataatactgaagttaagaatgcagtgttggacagcattgacggcctt
ctgaaaaaggcttttgcctctccgtccttccaaggctacggctttgtatcatctttgtta
gtgctgctcggacttctcaagagtgaggacaaggtgaagcctgtgctcgtggttcccggc
cacctccacgccgtggagcacgtcgttcgacaggactacttccccaaagagaacatagca
gtgctgcaggccttcatgtcccgaaacatcaaggctctggagtcatgtggccatgcaaca
aacagcctccagtcaacattgcagagagtcagctctgagggctga
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