Etheostoma cragini (Arkansas darter): 117958078
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Entry
117958078 CDS
T07493
Symbol
gfap
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117958078 (gfap)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117958078 (gfap)
Membrane trafficking [BR:
ecra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117958078 (gfap)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
117958078 (gfap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
BLOC1_2
GAS
DUF1664
DUF7491
Phage_GP20
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
117958078
NCBI-ProteinID:
XP_034750223
LinkDB
All DBs
Position
15:16484938..16492246
Genome browser
AA seq
458 aa
AA seq
DB search
MCASFPIMESQRVQSSYRKRYGAQGSGSTGVRIGSLSSGRFSWHGTPRNLTHSSPMSRIS
FGSTNTALLLGSPVDRLDFPADSLLKAQYKETRTNEKMEMMGLNDRFASYIEKVRLLEQQ
NKVLVAELNQLKGKEPSRLGDIYQEELRELRRQVDGLTTGKARQEIEKDNLAADLTMLKQ
RLQDEIGLRQDAENNLNAYRQDVDEASLNRVQLERKIDALQDEINFLKKTHEEELRELQE
KIMAHQVHVDLDVSKPDLTAALRDIRVQYETMATSNMQETEDWYRSKFADLTDAANRNAE
ALRQAKQEANEYRRQIQVLTCDLEALRGTNESLERQLRELEDRFAMETTGYQDTVSHLEE
DIHALKEEMARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITIPVQSFSNLQFRETS
LDTKTPEAHVKRSILVRTVETRDGEIIKESTTEHKDLP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcttcattccccatcatggaaagtcagagagtccagtcctcatacagaaagcgc
tatggggctcagggctcaggcagcacaggagtcagaattgggagcctttcttcaggccgc
ttctcctggcatggcaccccacgcaacctcacccactccagccccatgtcccggatctcc
tttggctcaacaaacacggccctgctcctggggagccctgtggaccggctggacttccca
gctgattccctgctgaaggcccagtacaaggagacacgcaccaatgagaaaatggagatg
atgggcctgaatgaccgctttgccagctacatagagaaggtgcgcctgttggagcagcag
aacaaggtgctggtggcagagctgaaccagctgaaggggaaagagcccagccgcctggga
gacatctaccaagaggagctgagagagctgcgcaggcaggtggacggtctcactactggc
aaagctcggcaggagatagagaaggacaacctggctgcagatctgaccatgctcaagcag
agattgcaagatgagattggcctccgacaggatgcagagaacaatctaaatgcctataga
caggatgtggatgaggcgtctctcaatcgtgttcagctggagaggaagatcgatgccctg
caggatgaaatcaactttctaaagaagactcatgaagaggagctgcgtgagttacaggag
aagatcatggcccaccaggtgcatgttgacttggatgtatccaaaccagacctgactgct
gctctaagggacatcagggtccagtatgaaaccatggccacctcaaacatgcaggagact
gaggactggtaccgatccaagtttgctgacctgacagatgcagccaatcgaaatgcagaa
gccctgcgtcaggccaaacaggaagccaatgaataccggcgtcagatccaagtgttgacc
tgcgatcttgaggctctccgcggaacaaacgagtctctggaacgccagctccgggagctt
gaggaccgcttcgccatggagactactggttaccaagatacagtgagccatctggaggag
gacatccatgcgctgaaggaggagatggcaagacacctgcaggagtaccaggaccttctc
aacgtcaagctggccctggatattgagattgccacctacaggaagctgctggagggggag
gagagcaggataactattccggttcagagtttttccaacctgcagtttagagaaaccagt
ctggacactaaaaccccagaggcccacgtgaagaggagcatcctggttcgaactgtggag
accagagatggggagatcattaaggaatcaacaactgaacataaagatcttccgtaa
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integrated database retrieval system
